RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 FP248Q71RG6 208 aaPredicted RBP2.16□□□□□ -2.06
C2CD3-214ENST00000540057 FAM19A5Q7Z5A7 132 aaPredicted RBP2.16□□□□□ -2.06
C2CD3-214ENST00000540057 C5orf17Q8NAS9 161 aa2.16□□□□□ -2.06
C2CD3-214ENST00000540057 OR5A1Q8NGJ0 315 aa2.16□□□□□ -2.06
C2CD3-214ENST00000540057 CAMK2N2Q96S95 79 aa2.16□□□□□ -2.06
C2CD3-214ENST00000540057 WDR61Q9GZS3 305 aaKnown RBP2.16□□□□□ -2.06
C2CD3-214ENST00000540057 MED28Q9H204 178 aa2.16□□□□□ -2.06
C2CD3-214ENST00000540057 VCX3BQ9H321 246 aa2.16□□□□□ -2.06
C2CD3-214ENST00000540057 WFDC1Q9HC57 220 aa2.16□□□□□ -2.06
C2CD3-214ENST00000540057 RSL24D1Q9UHA3 163 aaKnown RBP2.16□□□□□ -2.06
C2CD3-214ENST00000540057 FLVCR2Q9UPI3 526 aa2.16□□□□□ -2.06
C2CD3-214ENST00000540057 NEBP20929 6669 aa2.16□□□□□ -2.06
C2CD3-214ENST00000540057 FLGP20930 4061 aaPredicted RBP2.16□□□□□ -2.06
C2CD3-214ENST00000540057 TMSB15BA0A087X1C1 80 aa2.15□□□□□ -2.07
C2CD3-214ENST00000540057 TRAV34A0A0B4J273 112 aa2.15□□□□□ -2.07
C2CD3-214ENST00000540057 C19orf71A6NCJ1 209 aa2.15□□□□□ -2.07
C2CD3-214ENST00000540057 M0QXV9 152 aa2.15□□□□□ -2.07
C2CD3-214ENST00000540057 M0QY20 66 aa2.15□□□□□ -2.07
C2CD3-214ENST00000540057 SH2D1AO60880 128 aa2.15□□□□□ -2.07
C2CD3-214ENST00000540057 KRTAP6-3Q3LI67 103 aa2.15□□□□□ -2.07
C2CD3-214ENST00000540057 STX12Q86Y82 276 aa2.15□□□□□ -2.07
C2CD3-214ENST00000540057 OR10AG1Q8NH19 301 aa2.15□□□□□ -2.07
C2CD3-214ENST00000540057 PGLYRP4Q96LB8 373 aa2.15□□□□□ -2.07
C2CD3-214ENST00000540057 KCNIP2Q9NS61 270 aa2.15□□□□□ -2.07
C2CD3-214ENST00000540057 EPDR1Q9UM22 224 aa2.15□□□□□ -2.07
C2CD3-214ENST00000540057 ARL2-SNX15V9GYD0 113 aa2.15□□□□□ -2.07
C2CD3-214ENST00000540057 MUC21A0A140T8X8 626 aa2.14□□□□□ -2.07
C2CD3-214ENST00000540057 LINC00959A0A1B0GUT2 108 aa2.14□□□□□ -2.07
C2CD3-214ENST00000540057 C17orf112F2Z3M2 114 aa2.14□□□□□ -2.07
C2CD3-214ENST00000540057 H3BMQ9 156 aa2.14□□□□□ -2.07
C2CD3-214ENST00000540057 HMGB3O15347 200 aaKnown RBP2.14□□□□□ -2.07
C2CD3-214ENST00000540057 BCL2L11O43521 198 aa2.14□□□□□ -2.07
C2CD3-214ENST00000540057 ESDP10768 282 aa2.14□□□□□ -2.07
C2CD3-214ENST00000540057 PVALBP20472 110 aaPredicted RBP2.14□□□□□ -2.07
C2CD3-214ENST00000540057 NKX2-5P52952 324 aaPredicted RBP2.14□□□□□ -2.07
C2CD3-214ENST00000540057 DEFA3P59666 94 aa2.14□□□□□ -2.07
C2CD3-214ENST00000540057 LINC00242Q5T6M2 205 aa2.14□□□□□ -2.07
C2CD3-214ENST00000540057 TOMM5Q8N4H5 51 aa2.14□□□□□ -2.07
C2CD3-214ENST00000540057 MRPS26Q9BYN8 205 aaKnown RBP2.14□□□□□ -2.07
C2CD3-214ENST00000540057 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.13□□□□□ -2.07
C2CD3-214ENST00000540057 IGKV2-29A2NJV5 120 aaPredicted RBP2.13□□□□□ -2.07
C2CD3-214ENST00000540057 FAM25EA8MYX2 175 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 SNAI2O43623 268 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 NUPR1O60356 82 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 NDUFB6O95139 128 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 AP3S2P59780 193 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 SSTP61278 116 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 IL15RAQ13261 267 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 COTL1Q14019 142 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 KRTAP20-1Q3LI63 56 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 AMMECR1LQ6DCA0 310 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 RNASEKQ6P5S7 137 aaKnown RBP2.13□□□□□ -2.07
C2CD3-214ENST00000540057 CD164L2Q6UWJ8 174 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 COX8CQ7Z4L0 72 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 Q86TA4 180 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 C2orf48Q96LS8 159 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 Q9H521 79 aa2.13□□□□□ -2.07
C2CD3-214ENST00000540057 IGLV8-61A0A075B6I0 122 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 A0A1B0GVG6 124 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 A0A1W2PPV4 95 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 MGPP08493 103 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 TLX1NBP0CAT3 122 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 ARL14EPLP0DKL9 152 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 SMIM17P0DL12 118 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 RPL28P46779 137 aaKnown RBP2.12□□□□□ -2.07
C2CD3-214ENST00000540057 RIGQ13278 110 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 FAM229BQ4G0N7 80 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 GAGE2EQ4V326 116 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 SPANXN1Q5VSR9 72 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 RASL11AQ6T310 242 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 OR2D3Q8NGH3 330 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 DEDD2Q8WXF8 326 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 IMMP2LQ96T52 175 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 VCX3AQ9NNX9 186 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 MRPL35Q9NZE8 188 aaKnown RBP2.12□□□□□ -2.07
C2CD3-214ENST00000540057 GAGE2DQ9UEU5 116 aa2.12□□□□□ -2.07
C2CD3-214ENST00000540057 A0A087WXM4 84 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 IGKV2D-26A0A0A0MRZ7 120 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 IGLV9-49A0A0B4J1Y8 123 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 G3V3Q6 166 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 COX7A2LO14548 114 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 CXCL1P09341 107 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 OR5AL1P0C617 328 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 STAG3L2P0CL84 134 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 STAG3L3P0CL85 134 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 ZNF25P17030 456 aaPredicted RBP2.11□□□□□ -2.07
C2CD3-214ENST00000540057 NTF3P20783 257 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 GCHFRP30047 84 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 SPAG11BQ08648 103 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 LRRC37A5PQ49AS3 106 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 PCOTHQ58A44 107 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
C2CD3-214ENST00000540057 DAND5Q8N907 189 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 AP1S3Q96PC3 154 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 SMDT1Q9H4I9 107 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 NIT2Q9NQR4 276 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 ZFP30Q9Y2G7 519 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
C2CD3-214ENST00000540057 PEX7O00628 323 aa2.1□□□□□ -2.07
C2CD3-214ENST00000540057 BCE1O60756 84 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms