RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 FAT1Q14517 4588 aa12.92□□□□□ -0.34
LINC00943-205ENST00000539315 TMEM262E9PQX1 116 aa12.91□□□□□ -0.34
LINC00943-205ENST00000539315 BTF3P20290 206 aaKnown RBP12.91□□□□□ -0.34
LINC00943-205ENST00000539315 CYSLTR1Q9Y271 337 aa12.91□□□□□ -0.34
LINC00943-205ENST00000539315 MRPS16Q9Y3D3 137 aaKnown RBP12.91□□□□□ -0.34
LINC00943-205ENST00000539315 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.89□□□□□ -0.35
LINC00943-205ENST00000539315 IGKV2-29A2NJV5 120 aaPredicted RBP12.89□□□□□ -0.35
LINC00943-205ENST00000539315 KRTAP10-2P60368 255 aa12.89□□□□□ -0.35
LINC00943-205ENST00000539315 AMMECR1LQ6DCA0 310 aa12.89□□□□□ -0.35
LINC00943-205ENST00000539315 C2orf66Q6UXQ4 117 aa12.89□□□□□ -0.35
LINC00943-205ENST00000539315 Q9H8V8 135 aa12.89□□□□□ -0.35
LINC00943-205ENST00000539315 NUPR1O60356 82 aa12.88□□□□□ -0.35
LINC00943-205ENST00000539315 HBDP02042 147 aa12.88□□□□□ -0.35
LINC00943-205ENST00000539315 GAGE6Q13070 117 aa12.88□□□□□ -0.35
LINC00943-205ENST00000539315 DGAT2L7PQ6IED9 249 aa12.88□□□□□ -0.35
LINC00943-205ENST00000539315 TOMM6Q96B49 74 aa12.88□□□□□ -0.35
LINC00943-205ENST00000539315 VPS13BQ7Z7G8 4022 aa12.87□□□□□ -0.35
LINC00943-205ENST00000539315 A0A087WX48 190 aa12.87□□□□□ -0.35
LINC00943-205ENST00000539315 LINC00310P59036 64 aa12.87□□□□□ -0.35
LINC00943-205ENST00000539315 TMEM101Q96IK0 257 aa12.87□□□□□ -0.35
LINC00943-205ENST00000539315 UPK3BQ9BT76 320 aa12.87□□□□□ -0.35
LINC00943-205ENST00000539315 FGF6P10767 208 aa12.86□□□□□ -0.35
LINC00943-205ENST00000539315 RPL39P62891 51 aaKnown RBP12.86□□□□□ -0.35
LINC00943-205ENST00000539315 PMCHL1Q16048 86 aa12.86□□□□□ -0.35
LINC00943-205ENST00000539315 FAM19A2Q8N3H0 131 aa12.86□□□□□ -0.35
LINC00943-205ENST00000539315 TIMM21Q9BVV7 248 aa12.86□□□□□ -0.35
LINC00943-205ENST00000539315 TMA7Q9Y2S6 64 aaKnown RBP12.86□□□□□ -0.35
LINC00943-205ENST00000539315 SIVA1O15304 175 aa12.85□□□□□ -0.35
LINC00943-205ENST00000539315 ZNF25P17030 456 aaPredicted RBP12.85□□□□□ -0.35
LINC00943-205ENST00000539315 MRPL52Q86TS9 123 aaKnown RBP12.85□□□□□ -0.35
LINC00943-205ENST00000539315 SCGB3A1Q96QR1 104 aa12.85□□□□□ -0.35
LINC00943-205ENST00000539315 SPANXA1Q9NS26 97 aa12.85□□□□□ -0.35
LINC00943-205ENST00000539315 DMBT1Q9UGM3 2413 aaPredicted RBP12.85□□□□□ -0.35
LINC00943-205ENST00000539315 A0A1B0GUV1 79 aa12.84□□□□□ -0.35
LINC00943-205ENST00000539315 ERASQ7Z444 233 aa12.84□□□□□ -0.35
LINC00943-205ENST00000539315 WFDC10BQ8IUB3 73 aa12.84□□□□□ -0.35
LINC00943-205ENST00000539315 PYGO1Q9Y3Y4 419 aa12.84□□□□□ -0.35
LINC00943-205ENST00000539315 CSDC2Q9Y534 153 aaKnown RBP12.84□□□□□ -0.35
LINC00943-205ENST00000539315 SNRPEP62304 92 aaKnown RBP12.83□□□□□ -0.36
LINC00943-205ENST00000539315 OR5A1Q8NGJ0 315 aa12.83□□□□□ -0.36
LINC00943-205ENST00000539315 TMEM141Q96I45 108 aa12.83□□□□□ -0.36
LINC00943-205ENST00000539315 UBE2D4Q9Y2X8 147 aa12.83□□□□□ -0.36
LINC00943-205ENST00000539315 A0A096LNJ9 63 aa12.82□□□□□ -0.36
LINC00943-205ENST00000539315 ATP5LO75964 103 aa12.82□□□□□ -0.36
LINC00943-205ENST00000539315 LEPROTL1O95214 131 aa12.82□□□□□ -0.36
LINC00943-205ENST00000539315 NPSP0C0P6 89 aa12.82□□□□□ -0.36
LINC00943-205ENST00000539315 S100A2P29034 98 aa12.82□□□□□ -0.36
LINC00943-205ENST00000539315 RBX1P62877 108 aa12.82□□□□□ -0.36
LINC00943-205ENST00000539315 PDZD11Q5EBL8 140 aa12.82□□□□□ -0.36
LINC00943-205ENST00000539315 PAPPA-AS1Q5QFB9 102 aa12.82□□□□□ -0.36
LINC00943-205ENST00000539315 TRAV9-2A0A087WT02 112 aa12.81□□□□□ -0.36
LINC00943-205ENST00000539315 C5orf52A6NGY3 159 aa12.81□□□□□ -0.36
LINC00943-205ENST00000539315 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.81□□□□□ -0.36
LINC00943-205ENST00000539315 DNAH10OSP0CZ25 163 aa12.81□□□□□ -0.36
LINC00943-205ENST00000539315 TTC32Q5I0X7 151 aa12.81□□□□□ -0.36
LINC00943-205ENST00000539315 LINC01556Q5JQF7 62 aa12.81□□□□□ -0.36
LINC00943-205ENST00000539315 TIMM17AQ99595 171 aa12.81□□□□□ -0.36
LINC00943-205ENST00000539315 HSPB8Q9UJY1 196 aa12.81□□□□□ -0.36
LINC00943-205ENST00000539315 IGIPA6NJ69 53 aa12.8□□□□□ -0.36
LINC00943-205ENST00000539315 IGHV3-30P01768 117 aa12.8□□□□□ -0.36
LINC00943-205ENST00000539315 IGHV3-33P01772 117 aa12.8□□□□□ -0.36
LINC00943-205ENST00000539315 IGHV3-30-3P0DP02 117 aa12.8□□□□□ -0.36
LINC00943-205ENST00000539315 IGHV3-30-5P0DP03 117 aa12.8□□□□□ -0.36
LINC00943-205ENST00000539315 MPV17L2Q567V2 206 aa12.8□□□□□ -0.36
LINC00943-205ENST00000539315 MYCBP2O75592 4640 aa12.79□□□□□ -0.36
LINC00943-205ENST00000539315 K7EP13 123 aa12.79□□□□□ -0.36
LINC00943-205ENST00000539315 FABP4P15090 132 aa12.79□□□□□ -0.36
LINC00943-205ENST00000539315 MRPS36P82909 103 aaKnown RBP12.79□□□□□ -0.36
LINC00943-205ENST00000539315 Q6ZN92 141 aa12.79□□□□□ -0.36
LINC00943-205ENST00000539315 HIST3H2BBQ8N257 126 aa12.79□□□□□ -0.36
LINC00943-205ENST00000539315 ZNF664Q8N3J9 261 aa12.79□□□□□ -0.36
LINC00943-205ENST00000539315 Q8N976 141 aa12.79□□□□□ -0.36
LINC00943-205ENST00000539315 PACRGQ96M98 296 aaPredicted RBP12.79□□□□□ -0.36
LINC00943-205ENST00000539315 ANGP03950 147 aaKnown RBP12.78□□□□□ -0.36
LINC00943-205ENST00000539315 VCX2Q9H322 139 aa12.78□□□□□ -0.36
LINC00943-205ENST00000539315 CDC42SE2Q9NRR3 84 aa12.78□□□□□ -0.36
LINC00943-205ENST00000539315 FLG2Q5D862 2391 aaPredicted RBP12.78□□□□□ -0.36
LINC00943-205ENST00000539315 IGLV4-60A0A075B6I1 120 aa12.77□□□□□ -0.37
LINC00943-205ENST00000539315 Q6ZRN7 208 aaPredicted RBP12.77□□□□□ -0.37
LINC00943-205ENST00000539315 C10orf126Q8N4M7 172 aa12.76□□□□□ -0.37
LINC00943-205ENST00000539315 IFI27L1Q96BM0 104 aa12.76□□□□□ -0.37
LINC00943-205ENST00000539315 OPRPNQ99935 248 aaPredicted RBP12.76□□□□□ -0.37
LINC00943-205ENST00000539315 IGLV4-3A0A075B6K6 122 aa12.75□□□□□ -0.37
LINC00943-205ENST00000539315 PRSS1P07477 247 aa12.75□□□□□ -0.37
LINC00943-205ENST00000539315 FUSP35637 526 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC00943-205ENST00000539315 TEX43Q6ZNM6 134 aa12.75□□□□□ -0.37
LINC00943-205ENST00000539315 KLK12Q9UKR0 248 aa12.75□□□□□ -0.37
LINC00943-205ENST00000539315 EPM2AB3EWF7 344 aa12.74□□□□□ -0.37
LINC00943-205ENST00000539315 LINC00269Q8N2A0 174 aa12.74□□□□□ -0.37
LINC00943-205ENST00000539315 Q8N3U1 123 aa12.74□□□□□ -0.37
LINC00943-205ENST00000539315 MAP1LC3CQ9BXW4 147 aa12.74□□□□□ -0.37
LINC00943-205ENST00000539315 XGP55808 180 aa12.73□□□□□ -0.37
LINC00943-205ENST00000539315 Q6ZUT4 128 aa12.73□□□□□ -0.37
LINC00943-205ENST00000539315 C2orf88Q9BSF0 95 aa12.73□□□□□ -0.37
LINC00943-205ENST00000539315 CRPP02741 224 aa12.72□□□□□ -0.37
LINC00943-205ENST00000539315 REG3AQ06141 175 aa12.72□□□□□ -0.37
LINC00943-205ENST00000539315 PMVKQ15126 192 aa12.72□□□□□ -0.37
LINC00943-205ENST00000539315 LINC00173Q6ZV60 143 aa12.72□□□□□ -0.37
LINC00943-205ENST00000539315 FAM104AQ969W3 186 aa12.72□□□□□ -0.37
LINC00943-205ENST00000539315 HIST1H2BLQ99880 126 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms