RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 ZNF664Q8N3J9 261 aa8.68□□□□□ -1.02
PBX3-212ENST00000538998 ISOC2Q96AB3 205 aa8.68□□□□□ -1.02
PBX3-212ENST00000538998 SEC11CQ9BY50 192 aa8.68□□□□□ -1.02
PBX3-212ENST00000538998 OSTCQ9NRP0 149 aa8.68□□□□□ -1.02
PBX3-212ENST00000538998 NIT2Q9NQR4 276 aa8.67□□□□□ -1.02
PBX3-212ENST00000538998 PSORS1C2Q9UIG4 136 aa8.67□□□□□ -1.02
PBX3-212ENST00000538998 TRAV26-2A0A0B4J265 109 aa8.66□□□□□ -1.02
PBX3-212ENST00000538998 A8MWL6 223 aa8.66□□□□□ -1.02
PBX3-212ENST00000538998 SLC7A5P1Q8MH63 180 aa8.66□□□□□ -1.02
PBX3-212ENST00000538998 FER1L6-AS1Q8NA97 138 aa8.66□□□□□ -1.02
PBX3-212ENST00000538998 CARD19Q96LW7 228 aa8.66□□□□□ -1.02
PBX3-212ENST00000538998 MUC2Q02817 5179 aa8.66□□□□□ -1.02
PBX3-212ENST00000538998 PPP1R2P9O14990 202 aa8.65□□□□□ -1.02
PBX3-212ENST00000538998 MT-ND4LP03901 98 aa8.65□□□□□ -1.02
PBX3-212ENST00000538998 FOXI1Q12951 378 aa8.65□□□□□ -1.02
PBX3-212ENST00000538998 AMMECR1LQ6DCA0 310 aa8.65□□□□□ -1.02
PBX3-212ENST00000538998 ADCYAP1P18509 176 aa8.64□□□□□ -1.03
PBX3-212ENST00000538998 CACNG7P62955 275 aa8.64□□□□□ -1.03
PBX3-212ENST00000538998 BORCS7Q96B45 105 aa8.64□□□□□ -1.03
PBX3-212ENST00000538998 IGHV1-58A0A0C4DH39 117 aa8.63□□□□□ -1.03
PBX3-212ENST00000538998 F2Z2F3 143 aa8.63□□□□□ -1.03
PBX3-212ENST00000538998 IGLC6P0CF74 106 aa8.63□□□□□ -1.03
PBX3-212ENST00000538998 PTTG1IPP53801 180 aa8.63□□□□□ -1.03
PBX3-212ENST00000538998 CT83Q5H943 113 aa8.63□□□□□ -1.03
PBX3-212ENST00000538998 V9GYV3 84 aa8.63□□□□□ -1.03
PBX3-212ENST00000538998 APOC3P02656 99 aa8.62□□□□□ -1.03
PBX3-212ENST00000538998 MT-ND6P03923 174 aa8.62□□□□□ -1.03
PBX3-212ENST00000538998 TRGC1P0CF51 173 aa8.62□□□□□ -1.03
PBX3-212ENST00000538998 RNASEKQ6P5S7 137 aaKnown RBP8.62□□□□□ -1.03
PBX3-212ENST00000538998 LYZL1Q6UWQ5 148 aa8.62□□□□□ -1.03
PBX3-212ENST00000538998 TSKUQ8WUA8 353 aa8.62□□□□□ -1.03
PBX3-212ENST00000538998 ANAPC16Q96DE5 110 aa8.62□□□□□ -1.03
PBX3-212ENST00000538998 KRTAP9-6A0A140TA67 174 aa8.61□□□□□ -1.03
PBX3-212ENST00000538998 H7C423 109 aa8.61□□□□□ -1.03
PBX3-212ENST00000538998 XCL1P47992 114 aa8.61□□□□□ -1.03
PBX3-212ENST00000538998 SYCNQ0VAF6 134 aa8.61□□□□□ -1.03
PBX3-212ENST00000538998 LINC00526Q96FQ7 95 aa8.61□□□□□ -1.03
PBX3-212ENST00000538998 KRTAP3-3Q9BYR6 98 aa8.61□□□□□ -1.03
PBX3-212ENST00000538998 KRTAP3-2Q9BYR7 98 aa8.61□□□□□ -1.03
PBX3-212ENST00000538998 CARHSP1Q9Y2V2 147 aaKnown RBP8.61□□□□□ -1.03
PBX3-212ENST00000538998 LOC107984640A0A0U1RRK4 108 aa8.6□□□□□ -1.03
PBX3-212ENST00000538998 ZNF561-AS1K7EIQ3 104 aa8.6□□□□□ -1.03
PBX3-212ENST00000538998 NTF3P20783 257 aa8.6□□□□□ -1.03
PBX3-212ENST00000538998 TWIST1Q15672 202 aa8.6□□□□□ -1.03
PBX3-212ENST00000538998 C10orf91Q5T1B1 145 aa8.6□□□□□ -1.03
PBX3-212ENST00000538998 PRR26Q8N8Z3 221 aa8.6□□□□□ -1.03
PBX3-212ENST00000538998 OR5A1Q8NGJ0 315 aa8.6□□□□□ -1.03
PBX3-212ENST00000538998 NAT8BQ9UHF3 227 aa8.6□□□□□ -1.03
PBX3-212ENST00000538998 HIGD1CA8MV81 97 aa8.59□□□□□ -1.03
PBX3-212ENST00000538998 SNAPINO95295 136 aa8.59□□□□□ -1.03
PBX3-212ENST00000538998 NCR2O95944 276 aa8.59□□□□□ -1.03
PBX3-212ENST00000538998 FGF6P10767 208 aa8.59□□□□□ -1.03
PBX3-212ENST00000538998 ZNF25P17030 456 aaPredicted RBP8.59□□□□□ -1.03
PBX3-212ENST00000538998 GAGE2BQ13066 116 aa8.59□□□□□ -1.03
PBX3-212ENST00000538998 C1orf137Q5JT78 98 aa8.59□□□□□ -1.03
PBX3-212ENST00000538998 SMIM15Q7Z3B0 74 aa8.59□□□□□ -1.03
PBX3-212ENST00000538998 SVBPQ8N300 66 aa8.59□□□□□ -1.03
PBX3-212ENST00000538998 DIRC1Q969H9 104 aa8.59□□□□□ -1.03
PBX3-212ENST00000538998 RPS10P5Q9NQ39 176 aa8.59□□□□□ -1.03
PBX3-212ENST00000538998 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.58□□□□□ -1.04
PBX3-212ENST00000538998 IGKV2-29A2NJV5 120 aaPredicted RBP8.58□□□□□ -1.04
PBX3-212ENST00000538998 C7orf77A4D0Y5 90 aa8.58□□□□□ -1.04
PBX3-212ENST00000538998 CCL25O15444 150 aa8.58□□□□□ -1.04
PBX3-212ENST00000538998 APCSP02743 223 aa8.58□□□□□ -1.04
PBX3-212ENST00000538998 CTRLP40313 264 aa8.58□□□□□ -1.04
PBX3-212ENST00000538998 CAMPP49913 170 aa8.58□□□□□ -1.04
PBX3-212ENST00000538998 RIGQ13278 110 aa8.58□□□□□ -1.04
PBX3-212ENST00000538998 RHEBQ15382 184 aa8.58□□□□□ -1.04
PBX3-212ENST00000538998 CTDSP1Q9GZU7 261 aa8.58□□□□□ -1.04
PBX3-212ENST00000538998 LINC00959A0A1B0GUT2 108 aa8.57□□□□□ -1.04
PBX3-212ENST00000538998 A0A1B0GUT8 65 aa8.57□□□□□ -1.04
PBX3-212ENST00000538998 A0A1W2PNN7 141 aa8.57□□□□□ -1.04
PBX3-212ENST00000538998 SMIM27A0A1W2PRY6 76 aa8.57□□□□□ -1.04
PBX3-212ENST00000538998 S100PP25815 95 aa8.57□□□□□ -1.04
PBX3-212ENST00000538998 FOXA3P55318 350 aaPredicted RBP8.57□□□□□ -1.04
PBX3-212ENST00000538998 PRR4Q16378 134 aa8.57□□□□□ -1.04
PBX3-212ENST00000538998 NUP35Q8NFH5 326 aa8.57□□□□□ -1.04
PBX3-212ENST00000538998 GATD1Q8NB37 220 aa8.56□□□□□ -1.04
PBX3-212ENST00000538998 TMEM101Q96IK0 257 aa8.56□□□□□ -1.04
PBX3-212ENST00000538998 BTF3L4Q96K17 158 aa8.56□□□□□ -1.04
PBX3-212ENST00000538998 IGLV1-50A0A075B6I6 118 aa8.55□□□□□ -1.04
PBX3-212ENST00000538998 SS18Q15532 418 aa8.55□□□□□ -1.04
PBX3-212ENST00000538998 C9orf116Q5BN46 136 aaPredicted RBP8.55□□□□□ -1.04
PBX3-212ENST00000538998 CD164L2Q6UWJ8 174 aa8.55□□□□□ -1.04
PBX3-212ENST00000538998 IGLV4-69A0A075B6H9 119 aa8.54□□□□□ -1.04
PBX3-212ENST00000538998 H0Y9J4 135 aa8.54□□□□□ -1.04
PBX3-212ENST00000538998 APOMO95445 188 aa8.54□□□□□ -1.04
PBX3-212ENST00000538998 IGLV7-43P04211 117 aa8.54□□□□□ -1.04
PBX3-212ENST00000538998 S100A8P05109 93 aa8.54□□□□□ -1.04
PBX3-212ENST00000538998 LCE2AQ5TA79 106 aaPredicted RBP8.54□□□□□ -1.04
PBX3-212ENST00000538998 MRPL54Q6P161 138 aaKnown RBP8.54□□□□□ -1.04
PBX3-212ENST00000538998 PHF5AQ7RTV0 110 aaKnown RBP8.53□□□□□ -1.04
PBX3-212ENST00000538998 IMMP2LQ96T52 175 aa8.53□□□□□ -1.04
PBX3-212ENST00000538998 CNFNQ9BYD5 112 aa8.53□□□□□ -1.04
PBX3-212ENST00000538998 TMEM242Q9NWH2 141 aa8.53□□□□□ -1.04
PBX3-212ENST00000538998 FAT4Q6V0I7 4981 aa8.52□□□□□ -1.04
PBX3-212ENST00000538998 A0A1B0GW15 77 aa8.52□□□□□ -1.05
PBX3-212ENST00000538998 SDHAF1A6NFY7 115 aa8.52□□□□□ -1.05
PBX3-212ENST00000538998 RPL18AQ02543 176 aaKnown RBP8.52□□□□□ -1.05
PBX3-212ENST00000538998 RPL39LQ96EH5 51 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms