RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 IGHV3-64A0A075B6Q5 118 aa9.58□□□□□ -0.88
RAB40B-202ENST00000538809 PPP1R17O96001 155 aa9.58□□□□□ -0.88
RAB40B-202ENST00000538809 CHTF8P0CG12 524 aa9.58□□□□□ -0.88
RAB40B-202ENST00000538809 CAMPP49913 170 aa9.58□□□□□ -0.88
RAB40B-202ENST00000538809 RPL37AP61513 92 aaKnown RBP9.58□□□□□ -0.88
RAB40B-202ENST00000538809 SUMO2P61956 95 aaKnown RBP9.58□□□□□ -0.88
RAB40B-202ENST00000538809 OR5A1Q8NGJ0 315 aa9.58□□□□□ -0.88
RAB40B-202ENST00000538809 TRBV24-1A0A075B6N3 115 aa9.57□□□□□ -0.88
RAB40B-202ENST00000538809 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.57□□□□□ -0.88
RAB40B-202ENST00000538809 C7orf77A4D0Y5 90 aa9.57□□□□□ -0.88
RAB40B-202ENST00000538809 LINC00862A6NCI5 91 aa9.57□□□□□ -0.88
RAB40B-202ENST00000538809 VCYO14598 125 aa9.57□□□□□ -0.88
RAB40B-202ENST00000538809 BTF3L4Q96K17 158 aa9.57□□□□□ -0.88
RAB40B-202ENST00000538809 LRP1Q07954 4544 aaKnown RBP9.56□□□□□ -0.88
RAB40B-202ENST00000538809 RPL32P62910 135 aaKnown RBP9.56□□□□□ -0.88
RAB40B-202ENST00000538809 HBBP68871 147 aa9.56□□□□□ -0.88
RAB40B-202ENST00000538809 MRPL54Q6P161 138 aaKnown RBP9.56□□□□□ -0.88
RAB40B-202ENST00000538809 TMEM101Q96IK0 257 aa9.56□□□□□ -0.88
RAB40B-202ENST00000538809 CDC42SE2Q9NRR3 84 aa9.56□□□□□ -0.88
RAB40B-202ENST00000538809 FAT3Q8TDW7 4589 aa9.55□□□□□ -0.88
RAB40B-202ENST00000538809 LINC00959A0A1B0GUT2 108 aa9.55□□□□□ -0.88
RAB40B-202ENST00000538809 KRTAP29-1A8MX34 341 aaPredicted RBP9.55□□□□□ -0.88
RAB40B-202ENST00000538809 PPP1R2P9O14990 202 aa9.55□□□□□ -0.88
RAB40B-202ENST00000538809 XCL1P47992 114 aa9.55□□□□□ -0.88
RAB40B-202ENST00000538809 FOXI1Q12951 378 aa9.55□□□□□ -0.88
RAB40B-202ENST00000538809 CFAP161Q6P656 301 aa9.55□□□□□ -0.88
RAB40B-202ENST00000538809 C20orf78Q9BR46 151 aa9.55□□□□□ -0.88
RAB40B-202ENST00000538809 CCL25O15444 150 aa9.54□□□□□ -0.88
RAB40B-202ENST00000538809 HNRNPA3P51991 378 aaKnown RBP9.54□□□□□ -0.88
RAB40B-202ENST00000538809 CIRBPQ14011 172 aaKnown RBP9.54□□□□□ -0.88
RAB40B-202ENST00000538809 CLLU1Q5K131 121 aa9.54□□□□□ -0.88
RAB40B-202ENST00000538809 CSDC2Q9Y534 153 aaKnown RBP9.54□□□□□ -0.88
RAB40B-202ENST00000538809 GVQW2A0A096LPI5 108 aaPredicted RBP9.53□□□□□ -0.88
RAB40B-202ENST00000538809 TNFRSF6BO95407 300 aa9.53□□□□□ -0.88
RAB40B-202ENST00000538809 S100A8P05109 93 aa9.53□□□□□ -0.88
RAB40B-202ENST00000538809 FCER1GP30273 86 aa9.53□□□□□ -0.88
RAB40B-202ENST00000538809 CKS2P33552 79 aa9.53□□□□□ -0.88
RAB40B-202ENST00000538809 RAB14P61106 215 aa9.53□□□□□ -0.88
RAB40B-202ENST00000538809 PNRC1Q12796 327 aaPredicted RBP9.53□□□□□ -0.88
RAB40B-202ENST00000538809 ATP5L2Q7Z4Y8 100 aa9.53□□□□□ -0.88
RAB40B-202ENST00000538809 ZNF664Q8N3J9 261 aa9.53□□□□□ -0.88
RAB40B-202ENST00000538809 SPACA4Q8TDM5 124 aa9.53□□□□□ -0.88
RAB40B-202ENST00000538809 KIR2DL4Q99706 377 aa9.53□□□□□ -0.88
RAB40B-202ENST00000538809 UBE2D4Q9Y2X8 147 aa9.53□□□□□ -0.88
RAB40B-202ENST00000538809 D6R8Y8 96 aa9.52□□□□□ -0.89
RAB40B-202ENST00000538809 F8W036 122 aa9.52□□□□□ -0.89
RAB40B-202ENST00000538809 IFITM2Q01629 132 aa9.52□□□□□ -0.89
RAB40B-202ENST00000538809 DPH3Q96FX2 82 aa9.52□□□□□ -0.89
RAB40B-202ENST00000538809 A0A087WYN8 130 aa9.51□□□□□ -0.89
RAB40B-202ENST00000538809 PHOX2AO14813 284 aa9.51□□□□□ -0.89
RAB40B-202ENST00000538809 NPYP01303 97 aa9.51□□□□□ -0.89
RAB40B-202ENST00000538809 COX6A2Q02221 97 aa9.51□□□□□ -0.89
RAB40B-202ENST00000538809 RNASE13Q5GAN3 156 aaKnown RBP9.51□□□□□ -0.89
RAB40B-202ENST00000538809 LINC00526Q96FQ7 95 aa9.51□□□□□ -0.89
RAB40B-202ENST00000538809 TIMM21Q9BVV7 248 aa9.51□□□□□ -0.89
RAB40B-202ENST00000538809 SMIM2Q9BVW6 85 aa9.51□□□□□ -0.89
RAB40B-202ENST00000538809 IGKV2-24A0A0C4DH68 120 aa9.5□□□□□ -0.89
RAB40B-202ENST00000538809 PPBPP02775 128 aa9.5□□□□□ -0.89
RAB40B-202ENST00000538809 SS18Q15532 418 aa9.5□□□□□ -0.89
RAB40B-202ENST00000538809 PRSS3P2Q8NHM4 247 aa9.5□□□□□ -0.89
RAB40B-202ENST00000538809 FAM104AQ969W3 186 aa9.5□□□□□ -0.89
RAB40B-202ENST00000538809 ANAPC16Q96DE5 110 aa9.5□□□□□ -0.89
RAB40B-202ENST00000538809 CD164L2Q6UWJ8 174 aa9.49□□□□□ -0.89
RAB40B-202ENST00000538809 IGHV1-58A0A0C4DH39 117 aa9.48□□□□□ -0.89
RAB40B-202ENST00000538809 TCAPO15273 167 aa9.48□□□□□ -0.89
RAB40B-202ENST00000538809 MT-ND4LP03901 98 aa9.48□□□□□ -0.89
RAB40B-202ENST00000538809 ADCYAP1P18509 176 aa9.48□□□□□ -0.89
RAB40B-202ENST00000538809 SMAGPQ0VAQ4 97 aa9.48□□□□□ -0.89
RAB40B-202ENST00000538809 MAJINQ3KP22 176 aa9.48□□□□□ -0.89
RAB40B-202ENST00000538809 Q6ZUT4 128 aa9.48□□□□□ -0.89
RAB40B-202ENST00000538809 RPL39P62891 51 aaKnown RBP9.47□□□□□ -0.89
RAB40B-202ENST00000538809 ORMDL3Q8N138 153 aa9.47□□□□□ -0.89
RAB40B-202ENST00000538809 TMEM18Q96B42 140 aa9.47□□□□□ -0.89
RAB40B-202ENST00000538809 PLAC8Q9NZF1 115 aa9.47□□□□□ -0.89
RAB40B-202ENST00000538809 A0A096LNI7 61 aa9.46□□□□□ -0.9
RAB40B-202ENST00000538809 PRSS47A8MTI9 375 aa9.46□□□□□ -0.9
RAB40B-202ENST00000538809 C1orf196B1AJZ1 125 aa9.46□□□□□ -0.9
RAB40B-202ENST00000538809 OXTP01178 125 aa9.46□□□□□ -0.9
RAB40B-202ENST00000538809 TMEM136Q6ZRR5 245 aa9.46□□□□□ -0.9
RAB40B-202ENST00000538809 CARD19Q96LW7 228 aa9.46□□□□□ -0.9
RAB40B-202ENST00000538809 PRELID3AQ96N28 172 aa9.46□□□□□ -0.9
RAB40B-202ENST00000538809 TRAV13-1A0A0B4J241 112 aa9.45□□□□□ -0.9
RAB40B-202ENST00000538809 UQCC3Q6UW78 93 aa9.45□□□□□ -0.9
RAB40B-202ENST00000538809 MRPS36P82909 103 aaKnown RBP9.44□□□□□ -0.9
RAB40B-202ENST00000538809 STPG4Q8N801 248 aa9.44□□□□□ -0.9
RAB40B-202ENST00000538809 SPANXA1Q9NS26 97 aa9.44□□□□□ -0.9
RAB40B-202ENST00000538809 TMEM218A2RU14 115 aa9.43□□□□□ -0.9
RAB40B-202ENST00000538809 ZNF561-AS1K7EIQ3 104 aa9.43□□□□□ -0.9
RAB40B-202ENST00000538809 MALP21145 153 aa9.43□□□□□ -0.9
RAB40B-202ENST00000538809 LAMTOR2Q9Y2Q5 125 aa9.43□□□□□ -0.9
RAB40B-202ENST00000538809 COX7A2LO14548 114 aa9.42□□□□□ -0.9
RAB40B-202ENST00000538809 SYCNQ0VAF6 134 aa9.42□□□□□ -0.9
RAB40B-202ENST00000538809 C7orf33Q8WU49 177 aa9.42□□□□□ -0.9
RAB40B-202ENST00000538809 IMMP2LQ96T52 175 aa9.42□□□□□ -0.9
RAB40B-202ENST00000538809 OPRPNQ99935 248 aaPredicted RBP9.42□□□□□ -0.9
RAB40B-202ENST00000538809 IGLV4-69A0A075B6H9 119 aa9.41□□□□□ -0.9
RAB40B-202ENST00000538809 C5orf38Q86SI9 138 aa9.41□□□□□ -0.9
RAB40B-202ENST00000538809 Q6ZRU5 148 aa9.4□□□□□ -0.9
RAB40B-202ENST00000538809 PYGO1Q9Y3Y4 419 aa9.4□□□□□ -0.9
RAB40B-202ENST00000538809 IGHV3OR16-9A0A0B4J2B5 98 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms