RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PRSS3P2Q8NHM4 247 aa11.84□□□□□ -0.51
TNFRSF1A-209ENST00000536717 H7C423 109 aa11.83□□□□□ -0.52
TNFRSF1A-209ENST00000536717 TRGC2P03986 189 aa11.83□□□□□ -0.52
TNFRSF1A-209ENST00000536717 IFI27P40305 119 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF1A-209ENST00000536717 XGP55808 180 aa11.83□□□□□ -0.52
TNFRSF1A-209ENST00000536717 MPV17L2Q567V2 206 aa11.83□□□□□ -0.52
TNFRSF1A-209ENST00000536717 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-209ENST00000536717 IGLV5-52A0A0A0MRZ9 124 aa11.82□□□□□ -0.52
TNFRSF1A-209ENST00000536717 IGKV2-29A2NJV5 120 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-209ENST00000536717 C1orf196B1AJZ1 125 aa11.82□□□□□ -0.52
TNFRSF1A-209ENST00000536717 K7EMI3 77 aa11.82□□□□□ -0.52
TNFRSF1A-209ENST00000536717 GCSHP23434 173 aa11.82□□□□□ -0.52
TNFRSF1A-209ENST00000536717 NTN5Q8WTR8 489 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF1A-209ENST00000536717 TMEM18Q96B42 140 aa11.82□□□□□ -0.52
TNFRSF1A-209ENST00000536717 RAB5BP61020 215 aa11.81□□□□□ -0.52
TNFRSF1A-209ENST00000536717 AMMECR1LQ6DCA0 310 aa11.81□□□□□ -0.52
TNFRSF1A-209ENST00000536717 RBX1P62877 108 aa11.81□□□□□ -0.52
TNFRSF1A-209ENST00000536717 Q8N976 141 aa11.81□□□□□ -0.52
TNFRSF1A-209ENST00000536717 C18orf32Q8TCD1 76 aa11.81□□□□□ -0.52
TNFRSF1A-209ENST00000536717 UBE2WQ96B02 151 aa11.81□□□□□ -0.52
TNFRSF1A-209ENST00000536717 A0A1B0GUV1 79 aa11.8□□□□□ -0.52
TNFRSF1A-209ENST00000536717 SMAGPQ0VAQ4 97 aa11.8□□□□□ -0.52
TNFRSF1A-209ENST00000536717 ORMDL2Q53FV1 153 aa11.8□□□□□ -0.52
TNFRSF1A-209ENST00000536717 RNASEKQ6P5S7 137 aaKnown RBP11.8□□□□□ -0.52
TNFRSF1A-209ENST00000536717 C20orf203Q8NBC4 194 aa11.8□□□□□ -0.52
TNFRSF1A-209ENST00000536717 COX11Q9Y6N1 276 aa11.8□□□□□ -0.52
TNFRSF1A-209ENST00000536717 IGKV2D-24A0A075B6R9 120 aa11.79□□□□□ -0.52
TNFRSF1A-209ENST00000536717 LECT2O14960 151 aa11.79□□□□□ -0.52
TNFRSF1A-209ENST00000536717 ANGP03950 147 aaKnown RBP11.79□□□□□ -0.52
TNFRSF1A-209ENST00000536717 FGF6P10767 208 aa11.79□□□□□ -0.52
TNFRSF1A-209ENST00000536717 FA2HQ7L5A8 372 aa11.79□□□□□ -0.52
TNFRSF1A-209ENST00000536717 RMI2Q96E14 147 aa11.79□□□□□ -0.52
TNFRSF1A-209ENST00000536717 ZNF25P17030 456 aaPredicted RBP11.78□□□□□ -0.52
TNFRSF1A-209ENST00000536717 BAALCQ8WXS3 180 aa11.78□□□□□ -0.52
TNFRSF1A-209ENST00000536717 G0S2P27469 103 aa11.77□□□□□ -0.52
TNFRSF1A-209ENST00000536717 ENHOQ6UWT2 76 aa11.77□□□□□ -0.52
TNFRSF1A-209ENST00000536717 TMEM101Q96IK0 257 aa11.77□□□□□ -0.52
TNFRSF1A-209ENST00000536717 LOC105371267A0A1B0GV96 52 aa11.76□□□□□ -0.53
TNFRSF1A-209ENST00000536717 Q0VG73 95 aa11.76□□□□□ -0.53
TNFRSF1A-209ENST00000536717 DGAT2L7PQ6IED9 249 aa11.76□□□□□ -0.53
TNFRSF1A-209ENST00000536717 MRPL52Q86TS9 123 aaKnown RBP11.76□□□□□ -0.53
TNFRSF1A-209ENST00000536717 IGLV4-60A0A075B6I1 120 aa11.76□□□□□ -0.53
TNFRSF1A-209ENST00000536717 CRPP02741 224 aa11.76□□□□□ -0.53
TNFRSF1A-209ENST00000536717 RPL39P62891 51 aaKnown RBP11.76□□□□□ -0.53
TNFRSF1A-209ENST00000536717 OR5A1Q8NGJ0 315 aa11.76□□□□□ -0.53
TNFRSF1A-209ENST00000536717 AP5S1Q9NUS5 200 aa11.76□□□□□ -0.53
TNFRSF1A-209ENST00000536717 LINC01546A6NGU7 62 aa11.75□□□□□ -0.53
TNFRSF1A-209ENST00000536717 LINC00614P0C842 121 aa11.75□□□□□ -0.53
TNFRSF1A-209ENST00000536717 CYSLTR1Q9Y271 337 aa11.75□□□□□ -0.53
TNFRSF1A-209ENST00000536717 UBE2D4Q9Y2X8 147 aa11.75□□□□□ -0.53
TNFRSF1A-209ENST00000536717 VPS13BQ7Z7G8 4022 aa11.75□□□□□ -0.53
TNFRSF1A-209ENST00000536717 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.74□□□□□ -0.53
TNFRSF1A-209ENST00000536717 LINC00269Q8N2A0 174 aa11.74□□□□□ -0.53
TNFRSF1A-209ENST00000536717 TIMM21Q9BVV7 248 aa11.74□□□□□ -0.53
TNFRSF1A-209ENST00000536717 CSDC2Q9Y534 153 aaKnown RBP11.74□□□□□ -0.53
TNFRSF1A-209ENST00000536717 C2orf66Q6UXQ4 117 aa11.73□□□□□ -0.53
TNFRSF1A-209ENST00000536717 C1orf43Q9BWL3 253 aa11.73□□□□□ -0.53
TNFRSF1A-209ENST00000536717 SPANXA1Q9NS26 97 aa11.73□□□□□ -0.53
TNFRSF1A-209ENST00000536717 HAMPP81172 84 aa11.72□□□□□ -0.53
TNFRSF1A-209ENST00000536717 CLPSL2Q6UWE3 100 aa11.72□□□□□ -0.53
TNFRSF1A-209ENST00000536717 BAGE3Q86Y29 109 aa11.72□□□□□ -0.53
TNFRSF1A-209ENST00000536717 PRR34Q9NV39 138 aa11.72□□□□□ -0.53
TNFRSF1A-209ENST00000536717 FAM30AQ9NZY2 134 aa11.72□□□□□ -0.53
TNFRSF1A-209ENST00000536717 REG3AQ06141 175 aa11.71□□□□□ -0.53
TNFRSF1A-209ENST00000536717 URB1-AS1Q96HZ7 61 aa11.71□□□□□ -0.53
TNFRSF1A-209ENST00000536717 LINC01549A6NIU2 74 aa11.7□□□□□ -0.54
TNFRSF1A-209ENST00000536717 EPM2AB3EWF7 344 aa11.7□□□□□ -0.54
TNFRSF1A-209ENST00000536717 MIAQ16674 131 aa11.7□□□□□ -0.54
TNFRSF1A-209ENST00000536717 ZNF664Q8N3J9 261 aa11.7□□□□□ -0.54
TNFRSF1A-209ENST00000536717 CHCHD1Q96BP2 118 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-209ENST00000536717 CDC42SE2Q9NRR3 84 aa11.7□□□□□ -0.54
TNFRSF1A-209ENST00000536717 PYGO1Q9Y3Y4 419 aa11.7□□□□□ -0.54
TNFRSF1A-209ENST00000536717 S100A6P06703 90 aa11.69□□□□□ -0.54
TNFRSF1A-209ENST00000536717 TOMM6Q96B49 74 aa11.69□□□□□ -0.54
TNFRSF1A-209ENST00000536717 IGKV3OR2-268A0A0C4DH90 116 aa11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 HIST1H2BKO60814 126 aa11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 SMR3BP02814 79 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 HIST1H2BJP06899 126 aa11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 HIST1H2BOP23527 126 aa11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 HIST1H2BBP33778 126 aa11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 HIST1H2BDP58876 126 aa11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 HIST1H2BCP62807 126 aa11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 MRPS36P82909 103 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 HIST2H2BEQ16778 126 aa11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 LINC01620Q4KN68 170 aa11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 KRTAP26-1Q6PEX3 210 aa11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 HIST1H2BHQ93079 126 aa11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 HIST1H2BNQ99877 126 aa11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 HIST1H2BMQ99879 126 aa11.68□□□□□ -0.54
TNFRSF1A-209ENST00000536717 TRAV8-4A0A0B4J246 113 aa11.67□□□□□ -0.54
TNFRSF1A-209ENST00000536717 C5orf52A6NGY3 159 aa11.67□□□□□ -0.54
TNFRSF1A-209ENST00000536717 Q5VSD8 79 aa11.67□□□□□ -0.54
TNFRSF1A-209ENST00000536717 Q6ZSA8 131 aa11.67□□□□□ -0.54
TNFRSF1A-209ENST00000536717 Q6ZUT4 128 aa11.67□□□□□ -0.54
TNFRSF1A-209ENST00000536717 HSBP1O75506 76 aa11.66□□□□□ -0.54
TNFRSF1A-209ENST00000536717 HBDP02042 147 aa11.66□□□□□ -0.54
TNFRSF1A-209ENST00000536717 SCGB3A1Q96QR1 104 aa11.66□□□□□ -0.54
TNFRSF1A-209ENST00000536717 NPSP0C0P6 89 aa11.65□□□□□ -0.54
TNFRSF1A-209ENST00000536717 PMCHL1Q16048 86 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms