RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 IGHV3OR16-12A0A075B7B8 117 aa9.32□□□□□ -0.92
CDK5RAP3-202ENST00000536708 INSP01308 110 aa9.32□□□□□ -0.92
CDK5RAP3-202ENST00000536708 TENM3Q9P273 2699 aa9.31□□□□□ -0.92
CDK5RAP3-202ENST00000536708 A0A0J9YY99 117 aa9.31□□□□□ -0.92
CDK5RAP3-202ENST00000536708 PSMB2P49721 201 aa9.31□□□□□ -0.92
CDK5RAP3-202ENST00000536708 UBE2D3P61077 147 aa9.31□□□□□ -0.92
CDK5RAP3-202ENST00000536708 UBE2D2P62837 147 aa9.31□□□□□ -0.92
CDK5RAP3-202ENST00000536708 LYRM7Q5U5X0 104 aa9.31□□□□□ -0.92
CDK5RAP3-202ENST00000536708 SCGB1D4Q6XE38 83 aa9.31□□□□□ -0.92
CDK5RAP3-202ENST00000536708 C1orf158Q8N1D5 194 aa9.31□□□□□ -0.92
CDK5RAP3-202ENST00000536708 CDIP1Q9H305 208 aa9.31□□□□□ -0.92
CDK5RAP3-202ENST00000536708 IGHV4-30-4P0DP06 118 aa9.3□□□□□ -0.92
CDK5RAP3-202ENST00000536708 PYGO1Q9Y3Y4 419 aa9.3□□□□□ -0.92
CDK5RAP3-202ENST00000536708 A8MWV9 139 aa9.3□□□□□ -0.92
CDK5RAP3-202ENST00000536708 M0R2P5 195 aa9.3□□□□□ -0.92
CDK5RAP3-202ENST00000536708 CRYBA4P53673 196 aa9.3□□□□□ -0.92
CDK5RAP3-202ENST00000536708 SRSF9Q13242 221 aaKnown RBP eCLIP9.3□□□□□ -0.922e-12■■□□□ 12.4
CDK5RAP3-202ENST00000536708 LOC107984156A0A0G2JMH3 177 aa9.29□□□□□ -0.92
CDK5RAP3-202ENST00000536708 ARL17AQ8IVW1 177 aa9.29□□□□□ -0.92
CDK5RAP3-202ENST00000536708 AMELXQ99217 191 aa9.29□□□□□ -0.92
CDK5RAP3-202ENST00000536708 EMP1P54849 157 aa9.28□□□□□ -0.92
CDK5RAP3-202ENST00000536708 TMEM170BQ5T4T1 132 aa9.28□□□□□ -0.92
CDK5RAP3-202ENST00000536708 SLC25A29Q8N8R3 303 aa9.28□□□□□ -0.92
CDK5RAP3-202ENST00000536708 CSNK1G2-AS1Q8NCQ2 148 aa9.28□□□□□ -0.92
CDK5RAP3-202ENST00000536708 DEFB104AQ8WTQ1 72 aa9.28□□□□□ -0.92
CDK5RAP3-202ENST00000536708 PPDPFLQ8WWR9 84 aa9.28□□□□□ -0.92
CDK5RAP3-202ENST00000536708 IGLV4-3A0A075B6K6 122 aa9.28□□□□□ -0.92
CDK5RAP3-202ENST00000536708 TMEM223A0PJW6 202 aa9.28□□□□□ -0.92
CDK5RAP3-202ENST00000536708 TSPEAR-AS2P59090 65 aa9.28□□□□□ -0.92
CDK5RAP3-202ENST00000536708 ZNF415Q09FC8 603 aa9.28□□□□□ -0.92
CDK5RAP3-202ENST00000536708 CFAP161Q6P656 301 aa9.28□□□□□ -0.92
CDK5RAP3-202ENST00000536708 LINC01587Q99440 93 aa9.28□□□□□ -0.92
CDK5RAP3-202ENST00000536708 NACAE9PAV3 2078 aa9.27□□□□□ -0.92
CDK5RAP3-202ENST00000536708 J3QQQ9 107 aa9.27□□□□□ -0.93
CDK5RAP3-202ENST00000536708 LEPROTO15243 131 aa9.27□□□□□ -0.93
CDK5RAP3-202ENST00000536708 CARD19Q96LW7 228 aa9.27□□□□□ -0.93
CDK5RAP3-202ENST00000536708 DEFB135Q30KP9 77 aa9.26□□□□□ -0.93
CDK5RAP3-202ENST00000536708 SFTA2Q6UW10 78 aa9.26□□□□□ -0.93
CDK5RAP3-202ENST00000536708 SBSPONQ8IVN8 264 aa9.26□□□□□ -0.93
CDK5RAP3-202ENST00000536708 TCL1BO95988 128 aa9.26□□□□□ -0.93
CDK5RAP3-202ENST00000536708 IGHV3-30P01768 117 aa9.26□□□□□ -0.93
CDK5RAP3-202ENST00000536708 MT-ATP8P03928 68 aa9.26□□□□□ -0.93
CDK5RAP3-202ENST00000536708 IGHV3-30-5P0DP03 117 aa9.26□□□□□ -0.93
CDK5RAP3-202ENST00000536708 ZNF22P17026 224 aaPredicted RBP9.26□□□□□ -0.93
CDK5RAP3-202ENST00000536708 TEN1Q86WV5 123 aa9.26□□□□□ -0.93
CDK5RAP3-202ENST00000536708 OPRPNQ99935 248 aaPredicted RBP9.26□□□□□ -0.93
CDK5RAP3-202ENST00000536708 SPXQ9BT56 116 aa9.26□□□□□ -0.93
CDK5RAP3-202ENST00000536708 VCX2Q9H322 139 aa9.26□□□□□ -0.93
CDK5RAP3-202ENST00000536708 RHODO00212 210 aa9.25□□□□□ -0.93
CDK5RAP3-202ENST00000536708 SPINK8P0C7L1 97 aa9.25□□□□□ -0.93
CDK5RAP3-202ENST00000536708 Q6ZUT4 128 aa9.25□□□□□ -0.93
CDK5RAP3-202ENST00000536708 C11orf72Q8NBR9 251 aa9.25□□□□□ -0.93
CDK5RAP3-202ENST00000536708 FAM104AQ969W3 186 aa9.25□□□□□ -0.93
CDK5RAP3-202ENST00000536708 GEMIN7Q9H840 131 aaKnown RBP9.25□□□□□ -0.93
CDK5RAP3-202ENST00000536708 TRBV20-1A0A075B6N2 111 aa9.24□□□□□ -0.93
CDK5RAP3-202ENST00000536708 LGALS3P17931 250 aaKnown RBP9.24□□□□□ -0.93
CDK5RAP3-202ENST00000536708 XGP55808 180 aa9.24□□□□□ -0.93
CDK5RAP3-202ENST00000536708 DNAJC30Q96LL9 226 aa9.24□□□□□ -0.93
CDK5RAP3-202ENST00000536708 TNFRSF18Q9Y5U5 241 aa9.24□□□□□ -0.93
CDK5RAP3-202ENST00000536708 CFC1BP0CG36 223 aa9.24□□□□□ -0.93
CDK5RAP3-202ENST00000536708 CFC1P0CG37 223 aa9.24□□□□□ -0.93
CDK5RAP3-202ENST00000536708 MRPS36P82909 103 aaKnown RBP9.24□□□□□ -0.93
CDK5RAP3-202ENST00000536708 RS1O15537 224 aa9.23□□□□□ -0.93
CDK5RAP3-202ENST00000536708 C10orf126Q8N4M7 172 aa9.23□□□□□ -0.93
CDK5RAP3-202ENST00000536708 MEGF8Q7Z7M0 2845 aa9.23□□□□□ -0.93
CDK5RAP3-202ENST00000536708 TRAV26-1A0A087WT03 109 aa9.23□□□□□ -0.93
CDK5RAP3-202ENST00000536708 A0A0J9YXV3 536 aa9.23□□□□□ -0.93
CDK5RAP3-202ENST00000536708 IGHV3-53P01767 116 aa9.23□□□□□ -0.93
CDK5RAP3-202ENST00000536708 APOC4P55056 127 aa9.22□□□□□ -0.93
CDK5RAP3-202ENST00000536708 Q6ZSN1 163 aa9.22□□□□□ -0.93
CDK5RAP3-202ENST00000536708 ANKRD29Q8N6D5 301 aa9.22□□□□□ -0.93
CDK5RAP3-202ENST00000536708 CHCHD7Q9BUK0 85 aa9.22□□□□□ -0.93
CDK5RAP3-202ENST00000536708 RETNQ9HD89 108 aa9.22□□□□□ -0.93
CDK5RAP3-202ENST00000536708 SPANXA1Q9NS26 97 aa9.22□□□□□ -0.93
CDK5RAP3-202ENST00000536708 IGHV3-73A0A0B4J1V6 119 aa9.21□□□□□ -0.93
CDK5RAP3-202ENST00000536708 K7EIL1 84 aa9.21□□□□□ -0.93
CDK5RAP3-202ENST00000536708 KPRPQ5T749 579 aaPredicted RBP9.21□□□□□ -0.93
CDK5RAP3-202ENST00000536708 KIR2DL5BQ8NHK3 375 aa9.21□□□□□ -0.93
CDK5RAP3-202ENST00000536708 COL7A1Q02388 2944 aa9.21□□□□□ -0.94
CDK5RAP3-202ENST00000536708 PLAC8L1A1L4L8 177 aa9.21□□□□□ -0.94
CDK5RAP3-202ENST00000536708 PRO1854Q9UHT4 67 aa9.21□□□□□ -0.94
CDK5RAP3-202ENST00000536708 X6R8D5 127 aa9.21□□□□□ -0.94
CDK5RAP3-202ENST00000536708 M0QXV9 152 aa9.2□□□□□ -0.94
CDK5RAP3-202ENST00000536708 KRTAP21-3Q3LHN1 58 aa9.2□□□□□ -0.94
CDK5RAP3-202ENST00000536708 IL17DQ8TAD2 202 aa9.2□□□□□ -0.94
CDK5RAP3-202ENST00000536708 TMEM263Q8WUH6 116 aaKnown RBP9.2□□□□□ -0.94
CDK5RAP3-202ENST00000536708 UBE2D4Q9Y2X8 147 aa9.2□□□□□ -0.94
CDK5RAP3-202ENST00000536708 TINCRA0A1B0GVN0 87 aa9.19□□□□□ -0.94
CDK5RAP3-202ENST00000536708 DEFB4AO15263 64 aa9.19□□□□□ -0.94
CDK5RAP3-202ENST00000536708 SCGB1C2P0DMR2 95 aa9.19□□□□□ -0.94
CDK5RAP3-202ENST00000536708 Q9UF83 564 aa9.19□□□□□ -0.94
CDK5RAP3-202ENST00000536708 EIF4EBP3O60516 100 aaPredicted RBP9.18□□□□□ -0.94
CDK5RAP3-202ENST00000536708 ERG28Q9UKR5 140 aa9.18□□□□□ -0.94
CDK5RAP3-202ENST00000536708 A0A0B4J2C4 111 aa9.17□□□□□ -0.94
CDK5RAP3-202ENST00000536708 IGHV1-58A0A0C4DH39 117 aa9.17□□□□□ -0.94
CDK5RAP3-202ENST00000536708 A8MZ25 164 aa9.17□□□□□ -0.94
CDK5RAP3-202ENST00000536708 IGHV3-30-3P0DP02 117 aa9.17□□□□□ -0.94
CDK5RAP3-202ENST00000536708 Q6ZTI0 123 aa9.17□□□□□ -0.94
CDK5RAP3-202ENST00000536708 C16orf74Q96GX8 76 aa9.17□□□□□ -0.94
CDK5RAP3-202ENST00000536708 TIMM21Q9BVV7 248 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms