RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 MEF2BQ02080 365 aaPredicted RBP4.94□□□□□ -1.62
CHFR-211ENST00000535897 C1orf137Q5JT78 98 aa4.94□□□□□ -1.62
CHFR-211ENST00000535897 GATD1Q8NB37 220 aa4.94□□□□□ -1.62
CHFR-211ENST00000535897 OR5A1Q8NGJ0 315 aa4.94□□□□□ -1.62
CHFR-211ENST00000535897 ISOC2Q96AB3 205 aa4.94□□□□□ -1.62
CHFR-211ENST00000535897 RPL39LQ96EH5 51 aaKnown RBP4.94□□□□□ -1.62
CHFR-211ENST00000535897 MUC2Q02817 5179 aa4.93□□□□□ -1.62
CHFR-211ENST00000535897 LINC00959A0A1B0GUT2 108 aa4.93□□□□□ -1.62
CHFR-211ENST00000535897 H7C423 109 aa4.93□□□□□ -1.62
CHFR-211ENST00000535897 ZNF25P17030 456 aaPredicted RBP4.93□□□□□ -1.62
CHFR-211ENST00000535897 MALP21145 153 aa4.93□□□□□ -1.62
CHFR-211ENST00000535897 CAMPP49913 170 aa4.93□□□□□ -1.62
CHFR-211ENST00000535897 CEBPGP53567 150 aa4.93□□□□□ -1.62
CHFR-211ENST00000535897 SS18Q15532 418 aa4.93□□□□□ -1.62
CHFR-211ENST00000535897 SMIM15Q7Z3B0 74 aa4.93□□□□□ -1.62
CHFR-211ENST00000535897 COMMD7Q86VX2 200 aa4.93□□□□□ -1.62
CHFR-211ENST00000535897 PRR26Q8N8Z3 221 aa4.93□□□□□ -1.62
CHFR-211ENST00000535897 PSORS1C2Q9UIG4 136 aa4.93□□□□□ -1.62
CHFR-211ENST00000535897 A0A0U1RQV1 116 aa4.92□□□□□ -1.62
CHFR-211ENST00000535897 C19orf71A6NCJ1 209 aa4.92□□□□□ -1.62
CHFR-211ENST00000535897 SDHAF1A6NFY7 115 aa4.92□□□□□ -1.62
CHFR-211ENST00000535897 PMCHP20382 165 aa4.92□□□□□ -1.62
CHFR-211ENST00000535897 CTRLP40313 264 aa4.92□□□□□ -1.62
CHFR-211ENST00000535897 RPL18AQ02543 176 aaKnown RBP4.92□□□□□ -1.62
CHFR-211ENST00000535897 C11orf52Q96A22 123 aa4.92□□□□□ -1.62
CHFR-211ENST00000535897 CAMK2N2Q96S95 79 aa4.92□□□□□ -1.62
CHFR-211ENST00000535897 SMDT1Q9H4I9 107 aa4.92□□□□□ -1.62
CHFR-211ENST00000535897 BIN3Q9NQY0 253 aa4.92□□□□□ -1.62
CHFR-211ENST00000535897 IGLV4-69A0A075B6H9 119 aa4.91□□□□□ -1.62
CHFR-211ENST00000535897 A0A1W2PNN7 141 aa4.91□□□□□ -1.62
CHFR-211ENST00000535897 TMEM250H0YL14 139 aa4.91□□□□□ -1.62
CHFR-211ENST00000535897 I3L3M4 83 aa4.91□□□□□ -1.62
CHFR-211ENST00000535897 PRR4Q16378 134 aa4.91□□□□□ -1.62
CHFR-211ENST00000535897 C9orf116Q5BN46 136 aaPredicted RBP4.91□□□□□ -1.62
CHFR-211ENST00000535897 CD164L2Q6UWJ8 174 aa4.91□□□□□ -1.62
CHFR-211ENST00000535897 DIRC1Q969H9 104 aa4.91□□□□□ -1.62
CHFR-211ENST00000535897 SMIM12Q96EX1 92 aa4.91□□□□□ -1.62
CHFR-211ENST00000535897 MRAP2Q96G30 205 aa4.91□□□□□ -1.62
CHFR-211ENST00000535897 COX7A2LO14548 114 aa4.9□□□□□ -1.63
CHFR-211ENST00000535897 APOMO95445 188 aa4.9□□□□□ -1.63
CHFR-211ENST00000535897 FAM74A3Q4VXF1 159 aa4.9□□□□□ -1.63
CHFR-211ENST00000535897 PHF5AQ7RTV0 110 aaKnown RBP4.9□□□□□ -1.63
CHFR-211ENST00000535897 SVBPQ8N300 66 aa4.9□□□□□ -1.63
CHFR-211ENST00000535897 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.63
CHFR-211ENST00000535897 TMEM242Q9NWH2 141 aa4.9□□□□□ -1.63
CHFR-211ENST00000535897 A0A087WZ39 114 aa4.89□□□□□ -1.63
CHFR-211ENST00000535897 ZNF727A8MUV8 499 aa4.89□□□□□ -1.63
CHFR-211ENST00000535897 IGLV7-43P04211 117 aa4.89□□□□□ -1.63
CHFR-211ENST00000535897 UBE2D1P51668 147 aa4.89□□□□□ -1.63
CHFR-211ENST00000535897 FOXA3P55318 350 aaPredicted RBP4.89□□□□□ -1.63
CHFR-211ENST00000535897 NUDT10Q8NFP7 164 aa4.89□□□□□ -1.63
CHFR-211ENST00000535897 NUDT11Q96G61 164 aa4.89□□□□□ -1.63
CHFR-211ENST00000535897 SMIM7Q9BQ49 75 aa4.89□□□□□ -1.63
CHFR-211ENST00000535897 CNFNQ9BYD5 112 aa4.89□□□□□ -1.63
CHFR-211ENST00000535897 RPP21Q9H633 154 aaKnown RBP4.89□□□□□ -1.63
CHFR-211ENST00000535897 TRBV20OR9-2A0A075B6H5 130 aa4.88□□□□□ -1.63
CHFR-211ENST00000535897 LOC105371267A0A1B0GV96 52 aa4.88□□□□□ -1.63
CHFR-211ENST00000535897 C1orf196B1AJZ1 125 aa4.88□□□□□ -1.63
CHFR-211ENST00000535897 H0Y9J4 135 aa4.88□□□□□ -1.63
CHFR-211ENST00000535897 SNAPINO95295 136 aa4.88□□□□□ -1.63
CHFR-211ENST00000535897 TSHBP01222 138 aa4.88□□□□□ -1.63
CHFR-211ENST00000535897 SRP19P09132 144 aaKnown RBP4.88□□□□□ -1.63
CHFR-211ENST00000535897 S100A12P80511 92 aa4.88□□□□□ -1.63
CHFR-211ENST00000535897 NUP35Q8NFH5 326 aa4.88□□□□□ -1.63
CHFR-211ENST00000535897 TSKUQ8WUA8 353 aa4.88□□□□□ -1.63
CHFR-211ENST00000535897 OPRPNQ99935 248 aaPredicted RBP4.88□□□□□ -1.63
CHFR-211ENST00000535897 RNASE7Q9H1E1 156 aaKnown RBP4.88□□□□□ -1.63
CHFR-211ENST00000535897 ST20Q9HBF5 79 aa4.88□□□□□ -1.63
CHFR-211ENST00000535897 CDC42SE2Q9NRR3 84 aa4.88□□□□□ -1.63
CHFR-211ENST00000535897 IGLV1-50A0A075B6I6 118 aa4.87□□□□□ -1.63
CHFR-211ENST00000535897 C7orf77A4D0Y5 90 aa4.87□□□□□ -1.63
CHFR-211ENST00000535897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.87□□□□□ -1.63
CHFR-211ENST00000535897 ESDP10768 282 aa4.87□□□□□ -1.63
CHFR-211ENST00000535897 FCER1GP30273 86 aa4.87□□□□□ -1.63
CHFR-211ENST00000535897 SPAG11BQ08648 103 aa4.87□□□□□ -1.63
CHFR-211ENST00000535897 TMEM241Q24JQ0 296 aa4.87□□□□□ -1.63
CHFR-211ENST00000535897 RNASE13Q5GAN3 156 aaKnown RBP4.87□□□□□ -1.63
CHFR-211ENST00000535897 MRPL52Q86TS9 123 aaKnown RBP4.87□□□□□ -1.63
CHFR-211ENST00000535897 BORCS7Q96B45 105 aa4.87□□□□□ -1.63
CHFR-211ENST00000535897 TRAV13-1A0A0B4J241 112 aa4.86□□□□□ -1.63
CHFR-211ENST00000535897 TRBV6-5A0A0K0K1A5 114 aa4.86□□□□□ -1.63
CHFR-211ENST00000535897 TMEM218A2RU14 115 aa4.86□□□□□ -1.63
CHFR-211ENST00000535897 FAM19A5Q7Z5A7 132 aaPredicted RBP4.86□□□□□ -1.63
CHFR-211ENST00000535897 C5orf38Q86SI9 138 aa4.86□□□□□ -1.63
CHFR-211ENST00000535897 C2orf48Q96LS8 159 aa4.86□□□□□ -1.63
CHFR-211ENST00000535897 SEC11CQ9BY50 192 aa4.86□□□□□ -1.63
CHFR-211ENST00000535897 NAT8Q9UHE5 227 aa4.86□□□□□ -1.63
CHFR-211ENST00000535897 FAT4Q6V0I7 4981 aa4.85□□□□□ -1.63
CHFR-211ENST00000535897 FAM168BA1KXE4 195 aa4.85□□□□□ -1.63
CHFR-211ENST00000535897 K7EN84 100 aa4.85□□□□□ -1.63
CHFR-211ENST00000535897 RPL13AP40429 203 aaKnown RBP4.85□□□□□ -1.63
CHFR-211ENST00000535897 UBE2BP63146 152 aa4.85□□□□□ -1.63
CHFR-211ENST00000535897 SRSF3P84103 164 aaKnown RBP4.85□□□□□ -1.63
CHFR-211ENST00000535897 SMAGPQ0VAQ4 97 aa4.85□□□□□ -1.63
CHFR-211ENST00000535897 ADIRFQ15847 76 aa4.85□□□□□ -1.63
CHFR-211ENST00000535897 C10orf91Q5T1B1 145 aa4.85□□□□□ -1.63
CHFR-211ENST00000535897 OCC1Q8TAD7 63 aa4.85□□□□□ -1.63
CHFR-211ENST00000535897 TMA7Q9Y2S6 64 aaKnown RBP4.85□□□□□ -1.63
CHFR-211ENST00000535897 CARHSP1Q9Y2V2 147 aaKnown RBP4.85□□□□□ -1.63
CHFR-211ENST00000535897 C9JQL5 133 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms