RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 NXPH4O95158 308 aa11.66□□□□□ -0.54
MCF2L-232ENST00000535094 Q6ZSN1 163 aa11.66□□□□□ -0.54
MCF2L-232ENST00000535094 C18orf65Q6ZTR6 163 aa11.66□□□□□ -0.54
MCF2L-232ENST00000535094 FAM19A4Q96LR4 140 aa11.66□□□□□ -0.54
MCF2L-232ENST00000535094 FAM236AA0A1B0GUQ0 79 aa11.66□□□□□ -0.54
MCF2L-232ENST00000535094 FAM236BA0A1B0GV22 79 aa11.66□□□□□ -0.54
MCF2L-232ENST00000535094 LINC00158P58513 81 aa11.66□□□□□ -0.54
MCF2L-232ENST00000535094 TRBV30A0A0K0K1B3 111 aa11.65□□□□□ -0.54
MCF2L-232ENST00000535094 TMEM61Q8N0U2 210 aa11.65□□□□□ -0.54
MCF2L-232ENST00000535094 Q9HAA7 133 aa11.65□□□□□ -0.54
MCF2L-232ENST00000535094 TRGV2A0A075B6R0 118 aa11.65□□□□□ -0.54
MCF2L-232ENST00000535094 CHD6Q8TD26 2715 aa11.64□□□□□ -0.55
MCF2L-232ENST00000535094 STHQ8IWL8 128 aa11.64□□□□□ -0.55
MCF2L-232ENST00000535094 IGLV1-40P01703 118 aa11.64□□□□□ -0.55
MCF2L-232ENST00000535094 TMEM101Q96IK0 257 aa11.64□□□□□ -0.55
MCF2L-232ENST00000535094 PFN2P35080 140 aa11.64□□□□□ -0.55
MCF2L-232ENST00000535094 BAALC-AS2P0C853 105 aa11.63□□□□□ -0.55
MCF2L-232ENST00000535094 PIK3CD-AS1Q5SR53 167 aa11.63□□□□□ -0.55
MCF2L-232ENST00000535094 RBMY1A1P0DJD3 496 aaKnown RBP11.62□□□□□ -0.55
MCF2L-232ENST00000535094 RBMY1CP0DJD4 496 aa11.62□□□□□ -0.55
MCF2L-232ENST00000535094 RPL36AP83881 106 aaKnown RBP11.62□□□□□ -0.55
MCF2L-232ENST00000535094 RBMY1FQ15415 496 aaKnown RBP11.62□□□□□ -0.55
MCF2L-232ENST00000535094 RPL36ALQ969Q0 106 aaKnown RBP11.62□□□□□ -0.55
MCF2L-232ENST00000535094 SPANXA1Q9NS26 97 aa11.62□□□□□ -0.55
MCF2L-232ENST00000535094 PSMB8P28062 276 aa11.62□□□□□ -0.55
MCF2L-232ENST00000535094 HERV-K104P63124 156 aa11.61□□□□□ -0.55
MCF2L-232ENST00000535094 ODF3Q96PU9 254 aa11.61□□□□□ -0.55
MCF2L-232ENST00000535094 H3BT86 120 aa11.61□□□□□ -0.55
MCF2L-232ENST00000535094 INSP01308 110 aa11.61□□□□□ -0.55
MCF2L-232ENST00000535094 MRPS36P82909 103 aaKnown RBP11.61□□□□□ -0.55
MCF2L-232ENST00000535094 C9orf153Q5TBE3 101 aa11.6□□□□□ -0.55
MCF2L-232ENST00000535094 SBSPONQ8IVN8 264 aa11.6□□□□□ -0.55
MCF2L-232ENST00000535094 TINCRA0A1B0GVN0 87 aa11.59□□□□□ -0.55
MCF2L-232ENST00000535094 CRPP02741 224 aa11.59□□□□□ -0.55
MCF2L-232ENST00000535094 PAX4O43316 350 aa11.59□□□□□ -0.55
MCF2L-232ENST00000535094 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
MCF2L-232ENST00000535094 COX6A2Q02221 97 aa11.59□□□□□ -0.55
MCF2L-232ENST00000535094 UBE2D4Q9Y2X8 147 aa11.59□□□□□ -0.55
MCF2L-232ENST00000535094 BSNQ9UPA5 3926 aa11.59□□□□□ -0.55
MCF2L-232ENST00000535094 UTP20O75691 2785 aaKnown RBP11.59□□□□□ -0.55
MCF2L-232ENST00000535094 LINC00308Q8TCZ7 52 aa11.58□□□□□ -0.55
MCF2L-232ENST00000535094 CITED1Q99966 193 aa11.58□□□□□ -0.55
MCF2L-232ENST00000535094 EDA2RQ9HAV5 297 aa11.58□□□□□ -0.55
MCF2L-232ENST00000535094 LST1O00453 97 aa11.58□□□□□ -0.56
MCF2L-232ENST00000535094 PEMTQ9UBM1 199 aa11.58□□□□□ -0.56
MCF2L-232ENST00000535094 DAZ2Q13117 558 aaKnown RBP11.57□□□□□ -0.56
MCF2L-232ENST00000535094 DAZ4Q86SG3 579 aaKnown RBP11.57□□□□□ -0.56
MCF2L-232ENST00000535094 DAZ3Q9NR90 486 aaKnown RBP11.57□□□□□ -0.56
MCF2L-232ENST00000535094 NHLRC4P0CG21 123 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-232ENST00000535094 HERVK_113P63121 156 aa11.57□□□□□ -0.56
MCF2L-232ENST00000535094 LINC01356Q8N9X3 169 aa11.56□□□□□ -0.56
MCF2L-232ENST00000535094 NOP10Q9NPE3 64 aaKnown RBP11.56□□□□□ -0.56
MCF2L-232ENST00000535094 CHCHD7Q9BUK0 85 aa11.56□□□□□ -0.56
MCF2L-232ENST00000535094 PYGO1Q9Y3Y4 419 aa11.56□□□□□ -0.56
MCF2L-232ENST00000535094 TRGV4A0A0C4DH28 118 aa11.55□□□□□ -0.56
MCF2L-232ENST00000535094 LINC00694P0DN24 101 aa11.55□□□□□ -0.56
MCF2L-232ENST00000535094 COPS9Q8WXC6 57 aa11.55□□□□□ -0.56
MCF2L-232ENST00000535094 ATP5G1P05496 136 aa11.55□□□□□ -0.56
MCF2L-232ENST00000535094 C5orf38Q86SI9 138 aa11.55□□□□□ -0.56
MCF2L-232ENST00000535094 CELSR2Q9HCU4 2923 aa11.55□□□□□ -0.56
MCF2L-232ENST00000535094 IGKV3D-7A0A0C4DH55 119 aa11.54□□□□□ -0.56
MCF2L-232ENST00000535094 Q6ZTI0 123 aa11.54□□□□□ -0.56
MCF2L-232ENST00000535094 TEX15Q9BXT5 2789 aa11.54□□□□□ -0.56
MCF2L-232ENST00000535094 CLPSL2Q6UWE3 100 aa11.54□□□□□ -0.56
MCF2L-232ENST00000535094 Q8N2B8 174 aa11.54□□□□□ -0.56
MCF2L-232ENST00000535094 SPANXDQ9BXN6 97 aa11.54□□□□□ -0.56
MCF2L-232ENST00000535094 SPANXCQ9NY87 97 aa11.54□□□□□ -0.56
MCF2L-232ENST00000535094 FBN2P35556 2912 aa11.54□□□□□ -0.56
MCF2L-232ENST00000535094 VPREB3Q9UKI3 123 aa11.53□□□□□ -0.56
MCF2L-232ENST00000535094 LITAFQ99732 161 aa11.53□□□□□ -0.56
MCF2L-232ENST00000535094 KLK9Q2XQG4 91 aa11.53□□□□□ -0.56
MCF2L-232ENST00000535094 MIR7-3HGQ8N6C7 128 aa11.52□□□□□ -0.56
MCF2L-232ENST00000535094 RBMY1BA6NDE4 496 aaKnown RBP11.52□□□□□ -0.57
MCF2L-232ENST00000535094 RBMY1EA6NEQ0 496 aaKnown RBP11.52□□□□□ -0.57
MCF2L-232ENST00000535094 RBMY1DP0C7P1 496 aaKnown RBP11.52□□□□□ -0.57
MCF2L-232ENST00000535094 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.52□□□□□ -0.57
MCF2L-232ENST00000535094 MAP6D1Q9H9H5 199 aa11.52□□□□□ -0.57
MCF2L-232ENST00000535094 COX7A2LO14548 114 aa11.51□□□□□ -0.57
MCF2L-232ENST00000535094 PRB1P04280 392 aa11.51□□□□□ -0.57
MCF2L-232ENST00000535094 HIST1H4AP62805 103 aaKnown RBP11.51□□□□□ -0.57
MCF2L-232ENST00000535094 A0A096LPF7 62 aa11.51□□□□□ -0.57
MCF2L-232ENST00000535094 DEFB130BP0DP73 79 aa11.51□□□□□ -0.57
MCF2L-232ENST00000535094 DEFB130AP0DP74 79 aa11.51□□□□□ -0.57
MCF2L-232ENST00000535094 MRPL23Q16540 153 aaKnown RBP11.51□□□□□ -0.57
MCF2L-232ENST00000535094 NBEAL2Q6ZNJ1 2754 aa11.51□□□□□ -0.57
MCF2L-232ENST00000535094 NF1P21359 2839 aa11.51□□□□□ -0.57
MCF2L-232ENST00000535094 LINC00242Q5T6M2 205 aa11.51□□□□□ -0.57
MCF2L-232ENST00000535094 SND1-IT1Q9HBX3 110 aa11.51□□□□□ -0.57
MCF2L-232ENST00000535094 NDUFA1O15239 70 aa11.5□□□□□ -0.57
MCF2L-232ENST00000535094 TMEM243Q9BU79 118 aa11.5□□□□□ -0.57
MCF2L-232ENST00000535094 C14orf132Q9NPU4 83 aa11.5□□□□□ -0.57
MCF2L-232ENST00000535094 CFAP46Q8IYW2 2715 aa11.5□□□□□ -0.57
MCF2L-232ENST00000535094 C6orf226Q5I0X4 101 aa11.49□□□□□ -0.57
MCF2L-232ENST00000535094 SLPIP03973 132 aa11.49□□□□□ -0.57
MCF2L-232ENST00000535094 CITED2Q99967 270 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-232ENST00000535094 LOC100131303A0A0U1RQF7 123 aa11.48□□□□□ -0.57
MCF2L-232ENST00000535094 SDIM1Q6ZPB5 146 aa11.48□□□□□ -0.57
MCF2L-232ENST00000535094 LECT2O14960 151 aa11.46□□□□□ -0.57
MCF2L-232ENST00000535094 ZFHX3Q15911 3703 aa11.46□□□□□ -0.57
MCF2L-232ENST00000535094 SOSTDC1Q6X4U4 206 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms