RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 TRBV24-1A0A075B6N3 115 aa12.36□□□□□ -0.43
PACS1-215ENST00000534273 VCYO14598 125 aa12.36□□□□□ -0.43
PACS1-215ENST00000534273 S100A8P05109 93 aa12.36□□□□□ -0.43
PACS1-215ENST00000534273 PRSS1P07477 247 aa12.36□□□□□ -0.43
PACS1-215ENST00000534273 S100PP25815 95 aa12.36□□□□□ -0.43
PACS1-215ENST00000534273 HBBP68871 147 aa12.36□□□□□ -0.43
PACS1-215ENST00000534273 BTF3L4Q96K17 158 aa12.36□□□□□ -0.43
PACS1-215ENST00000534273 TRAV9-1A0A075B6T8 112 aa12.35□□□□□ -0.43
PACS1-215ENST00000534273 SUMO2P61956 95 aaKnown RBP12.35□□□□□ -0.43
PACS1-215ENST00000534273 FAT1Q14517 4588 aa12.35□□□□□ -0.43
PACS1-215ENST00000534273 EPM2AB3EWF7 344 aa12.34□□□□□ -0.43
PACS1-215ENST00000534273 ZNF25P17030 456 aaPredicted RBP12.34□□□□□ -0.43
PACS1-215ENST00000534273 IGKV3OR2-268A0A0C4DH90 116 aa12.33□□□□□ -0.44
PACS1-215ENST00000534273 SMR3BP02814 79 aaPredicted RBP12.33□□□□□ -0.44
PACS1-215ENST00000534273 CKS2P33552 79 aa12.33□□□□□ -0.44
PACS1-215ENST00000534273 RAB5AP20339 215 aa12.32□□□□□ -0.44
PACS1-215ENST00000534273 ATP5L2Q7Z4Y8 100 aa12.32□□□□□ -0.44
PACS1-215ENST00000534273 C20orf78Q9BR46 151 aa12.32□□□□□ -0.44
PACS1-215ENST00000534273 GAGE12HA6NDE8 117 aa12.31□□□□□ -0.44
PACS1-215ENST00000534273 FCER1GP30273 86 aa12.31□□□□□ -0.44
PACS1-215ENST00000534273 DGAT2L7PQ6IED9 249 aa12.31□□□□□ -0.44
PACS1-215ENST00000534273 MRPL52Q86TS9 123 aaKnown RBP12.31□□□□□ -0.44
PACS1-215ENST00000534273 OR5A1Q8NGJ0 315 aa12.31□□□□□ -0.44
PACS1-215ENST00000534273 TMEM101Q96IK0 257 aa12.31□□□□□ -0.44
PACS1-215ENST00000534273 TNFRSF6BO95407 300 aa12.3□□□□□ -0.44
PACS1-215ENST00000534273 RPL32P62910 135 aaKnown RBP12.3□□□□□ -0.44
PACS1-215ENST00000534273 Q5VSD8 79 aa12.3□□□□□ -0.44
PACS1-215ENST00000534273 CHCHD10Q8WYQ3 142 aaPredicted RBP12.3□□□□□ -0.44
PACS1-215ENST00000534273 KIR2DL4Q99706 377 aa12.3□□□□□ -0.44
PACS1-215ENST00000534273 TGIF2-C20orf24A0A0A6YYL0 155 aa12.29□□□□□ -0.44
PACS1-215ENST00000534273 D6R8Y8 96 aa12.29□□□□□ -0.44
PACS1-215ENST00000534273 PPBPP02775 128 aa12.28□□□□□ -0.44
PACS1-215ENST00000534273 CDC42SE2Q9NRR3 84 aa12.28□□□□□ -0.44
PACS1-215ENST00000534273 hDV102S1A0JD36 115 aa12.27□□□□□ -0.45
PACS1-215ENST00000534273 C9orf163Q8N9P6 203 aa12.27□□□□□ -0.45
PACS1-215ENST00000534273 LINC00959A0A1B0GUT2 108 aa12.26□□□□□ -0.45
PACS1-215ENST00000534273 PHOX2AO14813 284 aa12.26□□□□□ -0.45
PACS1-215ENST00000534273 NPYP01303 97 aa12.26□□□□□ -0.45
PACS1-215ENST00000534273 CNBPP62633 177 aaKnown RBP12.26□□□□□ -0.45
PACS1-215ENST00000534273 SCXQ7RTU7 201 aa12.26□□□□□ -0.45
PACS1-215ENST00000534273 ZNF664Q8N3J9 261 aa12.26□□□□□ -0.45
PACS1-215ENST00000534273 C15orf56Q8N910 161 aa12.26□□□□□ -0.45
PACS1-215ENST00000534273 CHAC1Q9BUX1 264 aa12.26□□□□□ -0.45
PACS1-215ENST00000534273 SMIM2Q9BVW6 85 aa12.26□□□□□ -0.45
PACS1-215ENST00000534273 FAM229AH3BQW9 127 aa12.25□□□□□ -0.45
PACS1-215ENST00000534273 FOXI1Q12951 378 aa12.25□□□□□ -0.45
PACS1-215ENST00000534273 COX19Q49B96 90 aa12.25□□□□□ -0.45
PACS1-215ENST00000534273 CFAP161Q6P656 301 aa12.25□□□□□ -0.45
PACS1-215ENST00000534273 UBE2D4Q9Y2X8 147 aa12.25□□□□□ -0.45
PACS1-215ENST00000534273 CSDC2Q9Y534 153 aaKnown RBP12.25□□□□□ -0.45
PACS1-215ENST00000534273 VPS13BQ7Z7G8 4022 aa12.25□□□□□ -0.45
PACS1-215ENST00000534273 TCAPO15273 167 aa12.24□□□□□ -0.45
PACS1-215ENST00000534273 SLPIP03973 132 aa12.24□□□□□ -0.45
PACS1-215ENST00000534273 SMAGPQ0VAQ4 97 aa12.24□□□□□ -0.45
PACS1-215ENST00000534273 TMEM136Q6ZRR5 245 aa12.24□□□□□ -0.45
PACS1-215ENST00000534273 ORMDL3Q8N138 153 aa12.24□□□□□ -0.45
PACS1-215ENST00000534273 XCL1P47992 114 aa12.23□□□□□ -0.45
PACS1-215ENST00000534273 PRELID3AQ96N28 172 aa12.23□□□□□ -0.45
PACS1-215ENST00000534273 TIMM21Q9BVV7 248 aa12.23□□□□□ -0.45
PACS1-215ENST00000534273 AP5S1Q9NUS5 200 aa12.23□□□□□ -0.45
PACS1-215ENST00000534273 C1orf196B1AJZ1 125 aa12.22□□□□□ -0.45
PACS1-215ENST00000534273 CCL25O15444 150 aa12.22□□□□□ -0.45
PACS1-215ENST00000534273 SS18Q15532 418 aa12.22□□□□□ -0.45
PACS1-215ENST00000534273 SDIM1Q6ZPB5 146 aa12.22□□□□□ -0.45
PACS1-215ENST00000534273 CIRBP-AS1Q8TBR5 109 aa12.22□□□□□ -0.45
PACS1-215ENST00000534273 INAFM2P0DMQ5 153 aa12.21□□□□□ -0.45
PACS1-215ENST00000534273 TMEM18Q96B42 140 aa12.21□□□□□ -0.45
PACS1-215ENST00000534273 LINC00528Q8N1L1 170 aa12.2□□□□□ -0.46
PACS1-215ENST00000534273 TMA7Q9Y2S6 64 aaKnown RBP12.2□□□□□ -0.46
PACS1-215ENST00000534273 GVQW2A0A096LPI5 108 aaPredicted RBP12.19□□□□□ -0.46
PACS1-215ENST00000534273 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.19□□□□□ -0.46
PACS1-215ENST00000534273 RPL39P62891 51 aaKnown RBP12.19□□□□□ -0.46
PACS1-215ENST00000534273 HIGD2BQ4VC39 106 aa12.19□□□□□ -0.46
PACS1-215ENST00000534273 RNASE13Q5GAN3 156 aaKnown RBP12.19□□□□□ -0.46
PACS1-215ENST00000534273 CD164L2Q6UWJ8 174 aa12.19□□□□□ -0.46
PACS1-215ENST00000534273 Q6ZUT4 128 aa12.19□□□□□ -0.46
PACS1-215ENST00000534273 GNB1LQ9BYB4 327 aa12.19□□□□□ -0.46
PACS1-215ENST00000534273 LAMTOR2Q9Y2Q5 125 aa12.19□□□□□ -0.46
PACS1-215ENST00000534273 SRRM2Q9UQ35 2752 aaKnown RBP12.18□□□□□ -0.46
PACS1-215ENST00000534273 PRSS47A8MTI9 375 aa12.18□□□□□ -0.46
PACS1-215ENST00000534273 RAB5BP61020 215 aa12.18□□□□□ -0.46
PACS1-215ENST00000534273 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.18□□□□□ -0.46
PACS1-215ENST00000534273 IGHV3-64A0A075B6Q5 118 aa12.17□□□□□ -0.46
PACS1-215ENST00000534273 MT-ND6P03923 174 aa12.17□□□□□ -0.46
PACS1-215ENST00000534273 TRGC2P03986 189 aa12.17□□□□□ -0.46
PACS1-215ENST00000534273 FAM104AQ969W3 186 aa12.17□□□□□ -0.46
PACS1-215ENST00000534273 SPANXA1Q9NS26 97 aa12.17□□□□□ -0.46
PACS1-215ENST00000534273 IGHV1-58A0A0C4DH39 117 aa12.16□□□□□ -0.46
PACS1-215ENST00000534273 PANO1I0J062 215 aa12.16□□□□□ -0.46
PACS1-215ENST00000534273 TRAV13-1A0A0B4J241 112 aa12.15□□□□□ -0.46
PACS1-215ENST00000534273 LOC389332A0A1B0GUA5 103 aa12.15□□□□□ -0.46
PACS1-215ENST00000534273 PLA2G1BP04054 148 aaKnown RBP12.15□□□□□ -0.46
PACS1-215ENST00000534273 MAP1LC3AQ9H492 121 aa12.15□□□□□ -0.46
PACS1-215ENST00000534273 TRAPPC1Q9Y5R8 145 aa12.15□□□□□ -0.46
PACS1-215ENST00000534273 MRPS36P82909 103 aaKnown RBP12.14□□□□□ -0.47
PACS1-215ENST00000534273 OPRPNQ99935 248 aaPredicted RBP12.14□□□□□ -0.47
PACS1-215ENST00000534273 CIRBPQ14011 172 aaKnown RBP12.13□□□□□ -0.47
PACS1-215ENST00000534273 FLG2Q5D862 2391 aaPredicted RBP12.13□□□□□ -0.47
PACS1-215ENST00000534273 COX7A2LO14548 114 aa12.12□□□□□ -0.47
PACS1-215ENST00000534273 FABP9Q0Z7S8 132 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms