RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 hDV103S1A0JD37 113 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 C5orf67F2Z3F1 127 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 IGKV1D-33P01593 117 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 IGKV1-33P01594 117 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 IGKV1-39P01597 117 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 IGLV1-51P01701 117 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 IGHV3-33P01772 117 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 IGKV1D-39P04432 117 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 SAA1P0DJI8 122 aaPredicted RBP1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 CCL5P13501 91 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 DYNLT1P63172 113 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 PLGLAQ15195 96 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 Q5VV11 94 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 SFTA2Q6UW10 78 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 DYNAPQ8N1N2 210 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 RPRMLQ8N4K4 120 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 Q8N6K4 173 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 TMEM141Q96I45 108 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 B9D2Q9BPU9 175 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 TIMM21Q9BVV7 248 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 PLA2G12AQ9BZM1 189 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 ZNF355PQ9NSJ1 428 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 PHLDA3Q9Y5J5 127 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 DNAJC13O75165 2243 aa1.98□□□□□ -2.09
ATPAF1-211ENST00000534216 FREM3P0C091 2139 aa1.97□□□□□ -2.09
ATPAF1-211ENST00000534216 KIAA0100Q14667 2235 aaKnown RBP1.97□□□□□ -2.09
ATPAF1-211ENST00000534216 TRBV30A0A0K0K1B3 111 aa1.97□□□□□ -2.09
ATPAF1-211ENST00000534216 HCG22E2RYF7 251 aa1.97□□□□□ -2.09
ATPAF1-211ENST00000534216 SPINK4O60575 86 aa1.97□□□□□ -2.09
ATPAF1-211ENST00000534216 SPINT3P49223 89 aa1.97□□□□□ -2.09
ATPAF1-211ENST00000534216 MIR17HGQ75NE6 70 aa1.97□□□□□ -2.09
ATPAF1-211ENST00000534216 PFN4Q8NHR9 129 aa1.97□□□□□ -2.09
ATPAF1-211ENST00000534216 KLF14Q8TD94 323 aaPredicted RBP1.97□□□□□ -2.09
ATPAF1-211ENST00000534216 FAM167A-AS1Q96KT0 104 aa1.97□□□□□ -2.09
ATPAF1-211ENST00000534216 Q96M85 177 aa1.97□□□□□ -2.09
ATPAF1-211ENST00000534216 PRO1854Q9UHT4 67 aa1.97□□□□□ -2.09
ATPAF1-211ENST00000534216 FREM1Q5H8C1 2179 aa1.97□□□□□ -2.09
ATPAF1-211ENST00000534216 MALRD1Q5VYJ5 2156 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 A0A087WVE0 104 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 CGB3P0DN86 165 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 CGB7P0DN87 165 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 FCER1GP30273 86 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 CD52P31358 61 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 PRR9Q5T870 116 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 SPANXN1Q5VSR9 72 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 ORMDL3Q8N138 153 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 DYNLRB2Q8TF09 96 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 CYP4F30PQ9H0H9 118 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 ZNRD1Q9P1U0 126 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 TAC3Q9UHF0 121 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 SSC5DA1L4H1 1573 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 CR1P17927 2039 aa1.96□□□□□ -2.1
ATPAF1-211ENST00000534216 TRBV10-3A0A0K0K1G6 114 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 A0A1B0GW54 56 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 SDHAF1A6NFY7 115 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 SH2D1AO60880 128 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 ERC2-IT1O76042 136 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 CCL3P10147 92 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 RPL28P46779 137 aaKnown RBP1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 RPL38P63173 70 aaKnown RBP1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 ATP5EP2Q5VTU8 51 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 ADM2Q7Z4H4 148 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 LYZL2Q7Z4W2 148 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 LYPD6Q86Y78 171 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 Q8IYB0 196 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 Q8N814 137 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 SPTSSBQ8NFR3 76 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 TMEM263Q8WUH6 116 aaKnown RBP1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 RETNLBQ9BQ08 111 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 CDC42SE1Q9NRR8 79 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 TMEM14AQ9Y6G1 99 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 COL4A5P29400 1685 aa1.95□□□□□ -2.1
ATPAF1-211ENST00000534216 COL27A1Q8IZC6 1860 aaPredicted RBP1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 IGKV3D-7A0A0C4DH55 119 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 IGHV5-10-1A0A0J9YXX1 117 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 TRBV7-4A0A0J9YYF1 115 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 LINC01546A6NGU7 62 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 IGHV3-30P01768 117 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 BAALC-AS2P0C853 105 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 IGHV1-8P0DP01 117 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 IGHV3-30-5P0DP03 117 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 PRB4P10163 310 aaPredicted RBP1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 RPL27AP46776 148 aaKnown RBP1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 TSPEAR-AS2P59090 65 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 FXYD3Q14802 87 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 C9orf116Q5BN46 136 aaPredicted RBP1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 ZNF826PQ6ZT77 177 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 DEFB106AQ8N104 65 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 TMEM14BQ9NUH8 114 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 SNURFQ9Y675 71 aa1.94□□□□□ -2.1
ATPAF1-211ENST00000534216 TMEM14DPA8MWL7 114 aa1.93□□□□□ -2.1
ATPAF1-211ENST00000534216 PSCAO43653 123 aa1.93□□□□□ -2.1
ATPAF1-211ENST00000534216 LY6HO94772 140 aa1.93□□□□□ -2.1
ATPAF1-211ENST00000534216 COX6B1P14854 86 aa1.93□□□□□ -2.1
ATPAF1-211ENST00000534216 NTM-AS1Q6ZSK4 140 aa1.93□□□□□ -2.1
ATPAF1-211ENST00000534216 ZFAND2AQ8N6M9 145 aa1.93□□□□□ -2.1
ATPAF1-211ENST00000534216 LINC01560Q8TB33 94 aa1.93□□□□□ -2.1
ATPAF1-211ENST00000534216 CDC42SE2Q9NRR3 84 aa1.93□□□□□ -2.1
ATPAF1-211ENST00000534216 C22orf24Q9Y442 160 aa1.93□□□□□ -2.1
ATPAF1-211ENST00000534216 LHFPL6Q9Y693 200 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms