RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 REG3AQ06141 175 aa10.46□□□□□ -0.73
CTTN-215ENST00000533931 ENHOQ6UWT2 76 aa10.46□□□□□ -0.73
CTTN-215ENST00000533931 Q6ZRN7 208 aaPredicted RBP10.46□□□□□ -0.73
CTTN-215ENST00000533931 LINC00336Q6ZUF6 198 aa10.46□□□□□ -0.73
CTTN-215ENST00000533931 LINC00269Q8N2A0 174 aa10.46□□□□□ -0.73
CTTN-215ENST00000533931 ZNF664Q8N3J9 261 aa10.46□□□□□ -0.73
CTTN-215ENST00000533931 UBE2WQ96B02 151 aa10.46□□□□□ -0.73
CTTN-215ENST00000533931 CCL25O15444 150 aa10.45□□□□□ -0.74
CTTN-215ENST00000533931 RPL39P62891 51 aaKnown RBP10.45□□□□□ -0.74
CTTN-215ENST00000533931 TOMM6Q96B49 74 aa10.45□□□□□ -0.74
CTTN-215ENST00000533931 URB1-AS1Q96HZ7 61 aa10.45□□□□□ -0.74
CTTN-215ENST00000533931 TIMM17AQ99595 171 aa10.44□□□□□ -0.74
CTTN-215ENST00000533931 RYR3Q15413 4870 aa10.43□□□□□ -0.74
CTTN-215ENST00000533931 IGIPA6NJ69 53 aa10.43□□□□□ -0.74
CTTN-215ENST00000533931 RTL8CO15255 209 aa10.43□□□□□ -0.74
CTTN-215ENST00000533931 PAPPA-AS1Q5QFB9 102 aa10.43□□□□□ -0.74
CTTN-215ENST00000533931 BAGE3Q86Y29 109 aa10.43□□□□□ -0.74
CTTN-215ENST00000533931 C1orf43Q9BWL3 253 aa10.43□□□□□ -0.74
CTTN-215ENST00000533931 HYDINQ4G0P3 5121 aa10.43□□□□□ -0.74
CTTN-215ENST00000533931 ERASQ7Z444 233 aa10.42□□□□□ -0.74
CTTN-215ENST00000533931 TMEM141Q96I45 108 aa10.42□□□□□ -0.74
CTTN-215ENST00000533931 Q9HAA7 133 aa10.42□□□□□ -0.74
CTTN-215ENST00000533931 HIST1H2BKO60814 126 aa10.41□□□□□ -0.74
CTTN-215ENST00000533931 HBDP02042 147 aa10.41□□□□□ -0.74
CTTN-215ENST00000533931 HIST1H2BJP06899 126 aa10.41□□□□□ -0.74
CTTN-215ENST00000533931 HIST1H2BOP23527 126 aa10.41□□□□□ -0.74
CTTN-215ENST00000533931 HIST1H2BBP33778 126 aa10.41□□□□□ -0.74
CTTN-215ENST00000533931 HIST1H2BDP58876 126 aa10.41□□□□□ -0.74
CTTN-215ENST00000533931 HIST1H2BCP62807 126 aa10.41□□□□□ -0.74
CTTN-215ENST00000533931 HIST2H2BEQ16778 126 aa10.41□□□□□ -0.74
CTTN-215ENST00000533931 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.41□□□□□ -0.74
CTTN-215ENST00000533931 Q6ZUT4 128 aa10.41□□□□□ -0.74
CTTN-215ENST00000533931 HIST1H2BHQ93079 126 aa10.41□□□□□ -0.74
CTTN-215ENST00000533931 HIST1H2BNQ99877 126 aa10.41□□□□□ -0.74
CTTN-215ENST00000533931 HIST1H2BMQ99879 126 aa10.41□□□□□ -0.74
CTTN-215ENST00000533931 IGLV4-3A0A075B6K6 122 aa10.4□□□□□ -0.74
CTTN-215ENST00000533931 C1orf196B1AJZ1 125 aa10.4□□□□□ -0.74
CTTN-215ENST00000533931 Q6ZN92 141 aa10.4□□□□□ -0.74
CTTN-215ENST00000533931 FAM104AQ969W3 186 aa10.4□□□□□ -0.74
CTTN-215ENST00000533931 IGKV2D-24A0A075B6R9 120 aa10.39□□□□□ -0.75
CTTN-215ENST00000533931 A0A096LNJ9 63 aa10.39□□□□□ -0.75
CTTN-215ENST00000533931 HSBP1O75506 76 aa10.39□□□□□ -0.75
CTTN-215ENST00000533931 CLPSL2Q6UWE3 100 aa10.39□□□□□ -0.75
CTTN-215ENST00000533931 SCGB3A1Q96QR1 104 aa10.39□□□□□ -0.75
CTTN-215ENST00000533931 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
CTTN-215ENST00000533931 PSCAO43653 123 aa10.38□□□□□ -0.75
CTTN-215ENST00000533931 SS18Q15532 418 aa10.38□□□□□ -0.75
CTTN-215ENST00000533931 PDZD11Q5EBL8 140 aa10.38□□□□□ -0.75
CTTN-215ENST00000533931 TEX43Q6ZNM6 134 aa10.38□□□□□ -0.75
CTTN-215ENST00000533931 SERF1AO75920 110 aa10.37□□□□□ -0.75
CTTN-215ENST00000533931 ATP5LO75964 103 aa10.37□□□□□ -0.75
CTTN-215ENST00000533931 COA6Q5JTJ3 125 aaKnown RBP10.37□□□□□ -0.75
CTTN-215ENST00000533931 KRTAP26-1Q6PEX3 210 aa10.37□□□□□ -0.75
CTTN-215ENST00000533931 AMELXQ99217 191 aa10.37□□□□□ -0.75
CTTN-215ENST00000533931 C2orf88Q9BSF0 95 aa10.37□□□□□ -0.75
CTTN-215ENST00000533931 VCX2Q9H322 139 aa10.37□□□□□ -0.75
CTTN-215ENST00000533931 DNAH2Q9P225 4427 aa10.36□□□□□ -0.75
CTTN-215ENST00000533931 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.36□□□□□ -0.75
CTTN-215ENST00000533931 LINC00310P59036 64 aa10.36□□□□□ -0.75
CTTN-215ENST00000533931 PRSS29PA6NIE9 313 aa10.35□□□□□ -0.75
CTTN-215ENST00000533931 IFITM10A6NMD0 228 aa10.35□□□□□ -0.75
CTTN-215ENST00000533931 CHCHD10Q8WYQ3 142 aaPredicted RBP10.35□□□□□ -0.75
CTTN-215ENST00000533931 OPRPNQ99935 248 aaPredicted RBP10.35□□□□□ -0.75
CTTN-215ENST00000533931 CD164L2Q6UWJ8 174 aa10.34□□□□□ -0.75
CTTN-215ENST00000533931 LINC00173Q6ZV60 143 aa10.34□□□□□ -0.75
CTTN-215ENST00000533931 FAM19A3Q7Z5A8 133 aa10.34□□□□□ -0.75
CTTN-215ENST00000533931 IGLV10-54A0A075B6I4 117 aa10.33□□□□□ -0.76
CTTN-215ENST00000533931 A0A087WTM6 91 aa10.33□□□□□ -0.76
CTTN-215ENST00000533931 TRAV13-1A0A0B4J241 112 aa10.33□□□□□ -0.76
CTTN-215ENST00000533931 IGKV3OR2-268A0A0C4DH90 116 aa10.33□□□□□ -0.76
CTTN-215ENST00000533931 LRCOL1A6NCL2 159 aa10.33□□□□□ -0.76
CTTN-215ENST00000533931 EREGO14944 169 aa10.33□□□□□ -0.76
CTTN-215ENST00000533931 SEC11AP67812 179 aa10.33□□□□□ -0.76
CTTN-215ENST00000533931 TNP2Q05952 138 aa10.33□□□□□ -0.76
CTTN-215ENST00000533931 PMCHL1Q16048 86 aa10.33□□□□□ -0.76
CTTN-215ENST00000533931 RNASE13Q5GAN3 156 aaKnown RBP10.33□□□□□ -0.76
CTTN-215ENST00000533931 PACRGQ96M98 296 aaPredicted RBP10.33□□□□□ -0.76
CTTN-215ENST00000533931 FRAS1Q86XX4 4008 aa10.32□□□□□ -0.76
CTTN-215ENST00000533931 GAGE12HA6NDE8 117 aa10.32□□□□□ -0.76
CTTN-215ENST00000533931 UBE2D1P51668 147 aa10.32□□□□□ -0.76
CTTN-215ENST00000533931 PMVKQ15126 192 aa10.32□□□□□ -0.76
CTTN-215ENST00000533931 C14orf177Q52M58 125 aa10.32□□□□□ -0.76
CTTN-215ENST00000533931 MAPKAPK5-AS1Q8N8E1 139 aa10.32□□□□□ -0.76
CTTN-215ENST00000533931 BAALCQ8WXS3 180 aa10.32□□□□□ -0.76
CTTN-215ENST00000533931 DNAH10Q8IVF4 4471 aa10.32□□□□□ -0.76
CTTN-215ENST00000533931 DNAH17Q9UFH2 4485 aa10.31□□□□□ -0.76
CTTN-215ENST00000533931 XCL1P47992 114 aa10.31□□□□□ -0.76
CTTN-215ENST00000533931 FOXI1Q12951 378 aa10.31□□□□□ -0.76
CTTN-215ENST00000533931 FAM19A2Q8N3H0 131 aa10.3□□□□□ -0.76
CTTN-215ENST00000533931 CST9LQ9H4G1 147 aa10.3□□□□□ -0.76
CTTN-215ENST00000533931 HSPB8Q9UJY1 196 aa10.3□□□□□ -0.76
CTTN-215ENST00000533931 NUPR1O60356 82 aa10.29□□□□□ -0.76
CTTN-215ENST00000533931 LEPROTL1O95214 131 aa10.29□□□□□ -0.76
CTTN-215ENST00000533931 LINC00242Q5T6M2 205 aa10.29□□□□□ -0.76
CTTN-215ENST00000533931 CFAP161Q6P656 301 aa10.29□□□□□ -0.76
CTTN-215ENST00000533931 IFI27L1Q96BM0 104 aa10.29□□□□□ -0.76
CTTN-215ENST00000533931 IGHV3OR16-9A0A0B4J2B5 98 aa10.28□□□□□ -0.76
CTTN-215ENST00000533931 A0A1B0GVY2 172 aa10.28□□□□□ -0.76
CTTN-215ENST00000533931 COX7A2LO14548 114 aa10.28□□□□□ -0.76
CTTN-215ENST00000533931 LINC01561Q8N1V8 128 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms