RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 SPAG11AQ6PDA7 123 aa-0.22□□□□□ -2.44
BRCA2-205ENST00000533776 TTC9CQ8N5M4 171 aa-0.22□□□□□ -2.44
BRCA2-205ENST00000533776 NAA60Q9H7X0 242 aa-0.22□□□□□ -2.44
BRCA2-205ENST00000533776 R4GMQ9 66 aa-0.22□□□□□ -2.44
BRCA2-205ENST00000533776 TET3O43151 1660 aa-0.22□□□□□ -2.44
BRCA2-205ENST00000533776 ALMS1Q8TCU4 4167 aa-0.22□□□□□ -2.45
BRCA2-205ENST00000533776 USF3Q68DE3 2245 aa-0.22□□□□□ -2.45
BRCA2-205ENST00000533776 SBF2Q86WG5 1849 aa-0.22□□□□□ -2.45
BRCA2-205ENST00000533776 AKAP6Q13023 2319 aa-0.22□□□□□ -2.45
BRCA2-205ENST00000533776 PLCE1Q9P212 2302 aa-0.22□□□□□ -2.45
BRCA2-205ENST00000533776 PAPPAQ13219 1627 aa-0.23□□□□□ -2.45
BRCA2-205ENST00000533776 PRKDCP78527 4128 aaKnown RBP-0.23□□□□□ -2.45
BRCA2-205ENST00000533776 TRBV7-3A0A075B6L6 115 aa-0.23□□□□□ -2.45
BRCA2-205ENST00000533776 MIF4GDA9UHW6 222 aaKnown RBP-0.23□□□□□ -2.45
BRCA2-205ENST00000533776 C10orf142B7Z368 130 aa-0.23□□□□□ -2.45
BRCA2-205ENST00000533776 SPRR2DP22532 72 aa-0.23□□□□□ -2.45
BRCA2-205ENST00000533776 WFDC2Q14508 124 aa-0.23□□□□□ -2.45
BRCA2-205ENST00000533776 Q5VSD8 79 aa-0.23□□□□□ -2.45
BRCA2-205ENST00000533776 LINC01558Q9Y6Z2 57 aa-0.23□□□□□ -2.45
BRCA2-205ENST00000533776 ROCK2O75116 1388 aaKnown RBP-0.23□□□□□ -2.45
BRCA2-205ENST00000533776 NSD3Q9BZ95 1437 aa-0.23□□□□□ -2.45
BRCA2-205ENST00000533776 BTAF1O14981 1849 aa-0.24□□□□□ -2.45
BRCA2-205ENST00000533776 A0A0D9SFI3 127 aa-0.24□□□□□ -2.45
BRCA2-205ENST00000533776 A0A1B0GV90 55 aa-0.24□□□□□ -2.45
BRCA2-205ENST00000533776 MYO7BQ6PIF6 2116 aa-0.24□□□□□ -2.45
BRCA2-205ENST00000533776 COMMD6Q7Z4G1 85 aa-0.24□□□□□ -2.45
BRCA2-205ENST00000533776 C5orf38Q86SI9 138 aa-0.24□□□□□ -2.45
BRCA2-205ENST00000533776 C1orf54Q8WWF1 131 aa-0.24□□□□□ -2.45
BRCA2-205ENST00000533776 PP6455Q8WZ26 134 aa-0.24□□□□□ -2.45
BRCA2-205ENST00000533776 SPRR4Q96PI1 79 aa-0.24□□□□□ -2.45
BRCA2-205ENST00000533776 AQP10Q96PS8 301 aa-0.24□□□□□ -2.45
BRCA2-205ENST00000533776 V9GYH0 126 aa-0.24□□□□□ -2.45
BRCA2-205ENST00000533776 IGLC7A0M8Q6 106 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 FAM25AB3EWG3 89 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 FAM25CB3EWG5 89 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 FAM25GB3EWG6 89 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 M0R3E3 92 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 HMGN4O00479 90 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 SPRR1AP35321 89 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 CATR1Q13166 79 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 KRTAP6-1Q3LI64 71 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 COPS9Q8WXC6 57 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 TSC22D3Q99576 134 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 MGST2Q99735 147 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 TP53AIP1Q9HCN2 124 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 NPVFQ9HCQ7 196 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 C10orf71Q711Q0 1435 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 HMGXB3Q12766 1538 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 ZANQ9Y493 2812 aa-0.25□□□□□ -2.45
BRCA2-205ENST00000533776 PKDREJQ9NTG1 2253 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 DOPEY2Q9Y3R5 2298 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 PCLOQ9Y6V0 5065 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 COL4A6Q14031 1691 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 RAPGEF6Q8TEU7 1601 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 ERCC6L2Q5T890 1561 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 TULP4Q9NRJ4 1543 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 MYOM2P54296 1465 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 SMG6Q86US8 1419 aaKnown RBP-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 CTXND1A0A1B0GTU2 59 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 F8VRH5 84 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 DLEU1O43261 78 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 TNFP01375 233 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 APOC2P02655 101 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 BAGE2Q86Y30 109 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 Q8IZM0 81 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 MYOZ3Q8TDC0 251 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 SMIM4Q8WVI0 70 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 PPP3R2Q96LZ3 170 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 DPH3P1Q9H4G8 78 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 DYNLRB1Q9NP97 96 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 CDC42SE2Q9NRR3 84 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 MUC2Q02817 5179 aa-0.26□□□□□ -2.45
BRCA2-205ENST00000533776 SCN7AQ01118 1682 aa-0.27□□□□□ -2.45
BRCA2-205ENST00000533776 PIEZO2Q9H5I5 2752 aa-0.27□□□□□ -2.45
BRCA2-205ENST00000533776 TRAV22A0A0B4J277 110 aa-0.27□□□□□ -2.45
BRCA2-205ENST00000533776 UQCR11O14957 56 aa-0.27□□□□□ -2.45
BRCA2-205ENST00000533776 SMIM6P0DI80 62 aa-0.27□□□□□ -2.45
BRCA2-205ENST00000533776 DEFB109BQ30KR1 87 aa-0.27□□□□□ -2.45
BRCA2-205ENST00000533776 Q6JHZ5 121 aa-0.27□□□□□ -2.45
BRCA2-205ENST00000533776 RPL13AP3Q6NVV1 102 aa-0.27□□□□□ -2.45
BRCA2-205ENST00000533776 C8orf59Q8N0T1 100 aaPredicted RBP-0.27□□□□□ -2.45
BRCA2-205ENST00000533776 SPCS1Q9Y6A9 102 aa-0.27□□□□□ -2.45
BRCA2-205ENST00000533776 GVINP1Q7Z2Y8 2422 aa-0.27□□□□□ -2.45
BRCA2-205ENST00000533776 DCHS2Q6V1P9 2916 aa-0.28□□□□□ -2.45
BRCA2-205ENST00000533776 SSSCA1O60232 199 aa-0.28□□□□□ -2.45
BRCA2-205ENST00000533776 CFDP00746 253 aaPredicted RBP-0.28□□□□□ -2.45
BRCA2-205ENST00000533776 AKAIN1P0CW23 69 aa-0.28□□□□□ -2.45
BRCA2-205ENST00000533776 IFITM1P13164 125 aa-0.28□□□□□ -2.45
BRCA2-205ENST00000533776 TMEM170BQ5T4T1 132 aa-0.28□□□□□ -2.45
BRCA2-205ENST00000533776 MRPL54Q6P161 138 aaKnown RBP-0.28□□□□□ -2.45
BRCA2-205ENST00000533776 DEFB123Q8N688 67 aa-0.28□□□□□ -2.45
BRCA2-205ENST00000533776 SPHKAPQ2M3C7 1700 aa-0.28□□□□□ -2.45
BRCA2-205ENST00000533776 KDM5AP29375 1690 aaKnown RBP-0.28□□□□□ -2.45
BRCA2-205ENST00000533776 EHBP1L1Q8N3D4 1523 aa-0.28□□□□□ -2.45
BRCA2-205ENST00000533776 NAIPQ13075 1403 aa-0.29□□□□□ -2.46
BRCA2-205ENST00000533776 STAB1Q9NY15 2570 aa-0.29□□□□□ -2.46
BRCA2-205ENST00000533776 KMT2CQ8NEZ4 4911 aaKnown RBP-0.29□□□□□ -2.46
BRCA2-205ENST00000533776 SPTBN1Q01082 2364 aaKnown RBP-0.29□□□□□ -2.46
BRCA2-205ENST00000533776 EFCAB10A6NFE3 127 aa-0.29□□□□□ -2.46
BRCA2-205ENST00000533776 LINC00587B1AMM8 73 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms