RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	C7orf77	A4D0Y5	90 aa		11.35	□□□□□ -0.59
BBS1-223	ENST00000533644	CAMP	P49913	170 aa		11.35	□□□□□ -0.59
BBS1-223	ENST00000533644	MRPL51	Q4U2R6	128 aa	Known RBP	11.35	□□□□□ -0.59
BBS1-223	ENST00000533644	CFAP161	Q6P656	301 aa		11.35	□□□□□ -0.59
BBS1-223	ENST00000533644	AP5S1	Q9NUS5	200 aa		11.35	□□□□□ -0.59
BBS1-223	ENST00000533644	PANO1	I0J062	215 aa		11.34	□□□□□ -0.59
BBS1-223	ENST00000533644	FOXI1	Q12951	378 aa		11.34	□□□□□ -0.59
BBS1-223	ENST00000533644	CIRBP	Q14011	172 aa	Known RBP	11.34	□□□□□ -0.59
BBS1-223	ENST00000533644	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.33	□□□□□ -0.6
BBS1-223	ENST00000533644	LINC00959	A0A1B0GUT2	108 aa		11.33	□□□□□ -0.6
BBS1-223	ENST00000533644		A0A1B0GXF2	115 aa		11.33	□□□□□ -0.6
BBS1-223	ENST00000533644	LINC00862	A6NCI5	91 aa		11.33	□□□□□ -0.6
BBS1-223	ENST00000533644	PPP1R2P9	O14990	202 aa		11.33	□□□□□ -0.6
BBS1-223	ENST00000533644	CDC42SE2	Q9NRR3	84 aa		11.33	□□□□□ -0.6
BBS1-223	ENST00000533644	TRBV24-1	A0A075B6N3	115 aa		11.32	□□□□□ -0.6
BBS1-223	ENST00000533644	IGHV3-64	A0A075B6Q5	118 aa		11.32	□□□□□ -0.6
BBS1-223	ENST00000533644	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.32	□□□□□ -0.6
BBS1-223	ENST00000533644	S100A8	P05109	93 aa		11.32	□□□□□ -0.6
BBS1-223	ENST00000533644	FCER1G	P30273	86 aa		11.32	□□□□□ -0.6
BBS1-223	ENST00000533644	C20orf78	Q9BR46	151 aa		11.32	□□□□□ -0.6
BBS1-223	ENST00000533644	RPL32	P62910	135 aa	Known RBP	11.31	□□□□□ -0.6
BBS1-223	ENST00000533644	HBB	P68871	147 aa		11.31	□□□□□ -0.6
BBS1-223	ENST00000533644	MRPL54	Q6P161	138 aa	Known RBP	11.31	□□□□□ -0.6
BBS1-223	ENST00000533644	ZNF664	Q8N3J9	261 aa		11.31	□□□□□ -0.6
BBS1-223	ENST00000533644	KIR2DL4	Q99706	377 aa		11.31	□□□□□ -0.6
BBS1-223	ENST00000533644	CSDC2	Q9Y534	153 aa	Known RBP	11.31	□□□□□ -0.6
BBS1-223	ENST00000533644	CCL25	O15444	150 aa		11.3	□□□□□ -0.6
BBS1-223	ENST00000533644	CKS2	P33552	79 aa		11.3	□□□□□ -0.6
BBS1-223	ENST00000533644	XCL1	P47992	114 aa		11.3	□□□□□ -0.6
BBS1-223	ENST00000533644	HIGD2B	Q4VC39	106 aa		11.3	□□□□□ -0.6
BBS1-223	ENST00000533644		F8W036	122 aa		11.29	□□□□□ -0.6
BBS1-223	ENST00000533644	UBE2D4	Q9Y2X8	147 aa		11.29	□□□□□ -0.6
BBS1-223	ENST00000533644	TNFRSF6B	O95407	300 aa		11.28	□□□□□ -0.6
BBS1-223	ENST00000533644	RAB14	P61106	215 aa		11.28	□□□□□ -0.6
BBS1-223	ENST00000533644	SMAGP	Q0VAQ4	97 aa		11.28	□□□□□ -0.6
BBS1-223	ENST00000533644	SS18	Q15532	418 aa		11.28	□□□□□ -0.6
BBS1-223	ENST00000533644	ATP5L2	Q7Z4Y8	100 aa		11.28	□□□□□ -0.6
BBS1-223	ENST00000533644		D6R8Y8	96 aa		11.27	□□□□□ -0.61
BBS1-223	ENST00000533644	PNRC1	Q12796	327 aa	Predicted RBP	11.27	□□□□□ -0.61
BBS1-223	ENST00000533644	CD164L2	Q6UWJ8	174 aa		11.27	□□□□□ -0.61
BBS1-223	ENST00000533644	SPACA4	Q8TDM5	124 aa		11.27	□□□□□ -0.61
BBS1-223	ENST00000533644	TIMM21	Q9BVV7	248 aa		11.27	□□□□□ -0.61
BBS1-223	ENST00000533644	SMIM2	Q9BVW6	85 aa		11.27	□□□□□ -0.61
BBS1-223	ENST00000533644	IGHV1-58	A0A0C4DH39	117 aa		11.26	□□□□□ -0.61
BBS1-223	ENST00000533644	PHOX2A	O14813	284 aa		11.26	□□□□□ -0.61
BBS1-223	ENST00000533644	TCAP	O15273	167 aa		11.26	□□□□□ -0.61
BBS1-223	ENST00000533644	PPBP	P02775	128 aa		11.26	□□□□□ -0.61
BBS1-223	ENST00000533644	CHTF8	P0CG12	524 aa		11.26	□□□□□ -0.61
BBS1-223	ENST00000533644	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.25	□□□□□ -0.61
BBS1-223	ENST00000533644	NPY	P01303	97 aa		11.25	□□□□□ -0.61
BBS1-223	ENST00000533644	RPL37A	P61513	92 aa	Known RBP	11.25	□□□□□ -0.61
BBS1-223	ENST00000533644	COX6A2	Q02221	97 aa		11.24	□□□□□ -0.61
BBS1-223	ENST00000533644	CLLU1	Q5K131	121 aa		11.24	□□□□□ -0.61
BBS1-223	ENST00000533644	TMEM18	Q96B42	140 aa		11.24	□□□□□ -0.61
BBS1-223	ENST00000533644		A0A087WYN8	130 aa		11.23	□□□□□ -0.61
BBS1-223	ENST00000533644	C1orf196	B1AJZ1	125 aa		11.23	□□□□□ -0.61
BBS1-223	ENST00000533644	RNASE13	Q5GAN3	156 aa	Known RBP	11.23	□□□□□ -0.61
BBS1-223	ENST00000533644		Q6ZUT4	128 aa		11.23	□□□□□ -0.61
BBS1-223	ENST00000533644	HMCN2	Q8NDA2	5059 aa		11.23	□□□□□ -0.61
BBS1-223	ENST00000533644	MT-ND4L	P03901	98 aa		11.22	□□□□□ -0.61
BBS1-223	ENST00000533644	ORMDL3	Q8N138	153 aa		11.22	□□□□□ -0.61
BBS1-223	ENST00000533644	PRSS3P2	Q8NHM4	247 aa		11.22	□□□□□ -0.61
BBS1-223	ENST00000533644	ANAPC16	Q96DE5	110 aa		11.22	□□□□□ -0.61
BBS1-223	ENST00000533644	PLAC8	Q9NZF1	115 aa		11.22	□□□□□ -0.61
BBS1-223	ENST00000533644		J3QL48	77 aa		11.21	□□□□□ -0.61
BBS1-223	ENST00000533644	RPL39	P62891	51 aa	Known RBP	11.21	□□□□□ -0.61
BBS1-223	ENST00000533644	FAM104A	Q969W3	186 aa		11.21	□□□□□ -0.61
BBS1-223	ENST00000533644	UBR4	Q5T4S7	5183 aa		11.2	□□□□□ -0.62
BBS1-223	ENST00000533644	TMEM136	Q6ZRR5	245 aa		11.2	□□□□□ -0.62
BBS1-223	ENST00000533644	LINC00526	Q96FQ7	95 aa		11.2	□□□□□ -0.62
BBS1-223	ENST00000533644	PRELID3A	Q96N28	172 aa		11.2	□□□□□ -0.62
BBS1-223	ENST00000533644	SPANXA1	Q9NS26	97 aa		11.2	□□□□□ -0.62
BBS1-223	ENST00000533644	LRP1	Q07954	4544 aa	Known RBP	11.19	□□□□□ -0.62
BBS1-223	ENST00000533644	TRAV13-1	A0A0B4J241	112 aa		11.19	□□□□□ -0.62
BBS1-223	ENST00000533644	COX7A2L	O14548	114 aa		11.19	□□□□□ -0.62
BBS1-223	ENST00000533644	HNRNPA3	P51991	378 aa	Known RBP	11.19	□□□□□ -0.62
BBS1-223	ENST00000533644	DPH3	Q96FX2	82 aa		11.19	□□□□□ -0.62
BBS1-223	ENST00000533644	CARD19	Q96LW7	228 aa		11.19	□□□□□ -0.62
BBS1-223	ENST00000533644	PKHD1L1	Q86WI1	4243 aa		11.19	□□□□□ -0.62
BBS1-223	ENST00000533644	ZNF561-AS1	K7EIQ3	104 aa		11.18	□□□□□ -0.62
BBS1-223	ENST00000533644	MRPS36	P82909	103 aa	Known RBP	11.18	□□□□□ -0.62
BBS1-223	ENST00000533644	LAMTOR2	Q9Y2Q5	125 aa		11.18	□□□□□ -0.62
BBS1-223	ENST00000533644		A0A096LNI7	61 aa		11.17	□□□□□ -0.62
BBS1-223	ENST00000533644	IGKV2-24	A0A0C4DH68	120 aa		11.17	□□□□□ -0.62
BBS1-223	ENST00000533644	PRSS47	A8MTI9	375 aa		11.17	□□□□□ -0.62
BBS1-223	ENST00000533644	SYCN	Q0VAF6	134 aa		11.17	□□□□□ -0.62
BBS1-223	ENST00000533644	PKIG	Q9Y2B9	76 aa		11.17	□□□□□ -0.62
BBS1-223	ENST00000533644	FAT3	Q8TDW7	4589 aa		11.17	□□□□□ -0.62
BBS1-223	ENST00000533644	OXT	P01178	125 aa		11.16	□□□□□ -0.62
BBS1-223	ENST00000533644	MAL	P21145	153 aa		11.16	□□□□□ -0.62
BBS1-223	ENST00000533644	IFITM2	Q01629	132 aa		11.16	□□□□□ -0.62
BBS1-223	ENST00000533644	MAJIN	Q3KP22	176 aa		11.16	□□□□□ -0.62
BBS1-223	ENST00000533644	IGLV4-69	A0A075B6H9	119 aa		11.15	□□□□□ -0.62
BBS1-223	ENST00000533644	ADCYAP1	P18509	176 aa		11.15	□□□□□ -0.62
BBS1-223	ENST00000533644	RAB5A	P20339	215 aa		11.15	□□□□□ -0.62
BBS1-223	ENST00000533644	UQCC3	Q6UW78	93 aa		11.15	□□□□□ -0.62
BBS1-223	ENST00000533644	OPRPN	Q99935	248 aa	Predicted RBP	11.15	□□□□□ -0.62
BBS1-223	ENST00000533644	C5orf38	Q86SI9	138 aa		11.14	□□□□□ -0.63
BBS1-223	ENST00000533644	IMMP2L	Q96T52	175 aa		11.14	□□□□□ -0.63
BBS1-223	ENST00000533644	LINC00474	Q9P2X8	69 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 103 ms