RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 HERVK_113P61574 105 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 LMO4P61968 165 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 WT1-ASQ06250 92 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 PDE6HQ13956 83 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 EDDM3AQ14507 147 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 PMVKQ15126 192 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 TMEM155Q4W5P6 130 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 SCGB1D4Q6XE38 83 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 ZNF826PQ6ZT77 177 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 ZNF833PQ6ZTB9 187 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 MDP1Q86V88 176 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 EXOC3-AS1Q8N2X6 119 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 LINC00574Q9H8X3 128 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 DPM3Q9P2X0 92 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 MALRD1Q5VYJ5 2156 aa3.86□□□□□ -1.79
C11orf54-212ENST00000533154 TENM1Q9UKZ4 2725 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 TRBV30A0A0K0K1B3 111 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 RBAKDNA6NC62 111 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 OOSP1A8MZH6 123 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 SRRM5B3KS81 715 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 H7C423 109 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 TFF1P04155 84 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 TMEM258P61165 79 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 ERCC8Q13216 396 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 ORMDL2Q53FV1 153 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 C3orf56Q8N813 242 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 SLC25A29Q8N8R3 303 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 TMEM263Q8WUH6 116 aaKnown RBP3.85□□□□□ -1.79
C11orf54-212ENST00000533154 TOMM6Q96B49 74 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 SHANK2-AS3Q9BTD1 123 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 ARHGAP32A7KAX9 2087 aa3.85□□□□□ -1.79
C11orf54-212ENST00000533154 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
C11orf54-212ENST00000533154 IGKV1D-17A0A075B6S4 117 aa3.84□□□□□ -1.79
C11orf54-212ENST00000533154 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.84□□□□□ -1.79
C11orf54-212ENST00000533154 TEX49A0A1B0GTD5 131 aa3.84□□□□□ -1.79
C11orf54-212ENST00000533154 OVOL1O14753 267 aa3.84□□□□□ -1.79
C11orf54-212ENST00000533154 IGKV1-16P04430 117 aa3.84□□□□□ -1.79
C11orf54-212ENST00000533154 DLX6P56179 175 aa3.84□□□□□ -1.79
C11orf54-212ENST00000533154 BSPH1Q075Z2 132 aa3.84□□□□□ -1.79
C11orf54-212ENST00000533154 ZNF56Q15929 161 aa3.84□□□□□ -1.79
C11orf54-212ENST00000533154 FAM201AQ5SY85 155 aa3.84□□□□□ -1.79
C11orf54-212ENST00000533154 SFTA2Q6UW10 78 aa3.84□□□□□ -1.79
C11orf54-212ENST00000533154 LINC00643Q86TS7 51 aa3.84□□□□□ -1.79
C11orf54-212ENST00000533154 KLF14Q8TD94 323 aaPredicted RBP3.84□□□□□ -1.79
C11orf54-212ENST00000533154 SMIM2Q9BVW6 85 aa3.84□□□□□ -1.79
C11orf54-212ENST00000533154 EDA2RQ9HAV5 297 aa3.84□□□□□ -1.79
C11orf54-212ENST00000533154 C11orf86A6NJI1 115 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 E7EUB6 86 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 ATOX1O00244 68 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 GAS8-AS1O95177 125 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 ORM1P02763 201 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 GATA1P15976 413 aaPredicted RBP3.83□□□□□ -1.8
C11orf54-212ENST00000533154 CNTFRP26992 372 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 LYZP61626 148 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 HIST1H4AP62805 103 aaKnown RBP3.83□□□□□ -1.8
C11orf54-212ENST00000533154 VMA21Q3ZAQ7 101 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 C2orf82Q6UX34 121 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 SDIM1Q6ZPB5 146 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 C5orf38Q86SI9 138 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 LEAP2Q969E1 77 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 SCGB3A1Q96QR1 104 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 METTL26Q96S19 204 aa3.83□□□□□ -1.8
C11orf54-212ENST00000533154 RPUSD1Q9UJJ7 312 aaKnown RBP3.83□□□□□ -1.8
C11orf54-212ENST00000533154 MEGF8Q7Z7M0 2845 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 ARFGEF3Q5TH69 2177 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 IGHV1-69DA0A0B4J2H0 117 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 IGHV3-64DA0A0J9YX35 117 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 A0A0J9YX75 114 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 E7EQL1 145 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 LYZL6O75951 148 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 LY6HO94772 140 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 IGLV2-23P01705 113 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 TRACP01848 142 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 C10orf55Q5SWW7 151 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 Q5XG85 94 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 C11orf71Q6IPW1 123 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 C2orf66Q6UXQ4 117 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 DPH3Q96FX2 82 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 AMELXQ99217 191 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 SLC50A1Q9BRV3 221 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 AGPAT4-IT1Q9H0P7 198 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 DHRS4-AS1Q9P1J3 65 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 LINC00527Q9UJ94 153 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 ZNF256Q9Y2P7 627 aaPredicted RBP3.82□□□□□ -1.8
C11orf54-212ENST00000533154 KLK5Q9Y337 293 aaPredicted RBP3.82□□□□□ -1.8
C11orf54-212ENST00000533154 ANK2Q01484 3957 aa3.82□□□□□ -1.8
C11orf54-212ENST00000533154 IGLV4-69A0A075B6H9 119 aa3.81□□□□□ -1.8
C11orf54-212ENST00000533154 SDHAF1A6NFY7 115 aa3.81□□□□□ -1.8
C11orf54-212ENST00000533154 M0R381 172 aa3.81□□□□□ -1.8
C11orf54-212ENST00000533154 M0R3E3 92 aa3.81□□□□□ -1.8
C11orf54-212ENST00000533154 PLXNB1O43157 2135 aa3.81□□□□□ -1.8
C11orf54-212ENST00000533154 IGHV3-48P01763 117 aa3.81□□□□□ -1.8
C11orf54-212ENST00000533154 RPL27AP46776 148 aaKnown RBP3.81□□□□□ -1.8
C11orf54-212ENST00000533154 ZNF80P51504 273 aaPredicted RBP3.81□□□□□ -1.8
C11orf54-212ENST00000533154 MRGPRG-AS1Q2M3A8 158 aa3.81□□□□□ -1.8
C11orf54-212ENST00000533154 CEMP1Q6PRD7 247 aaPredicted RBP3.81□□□□□ -1.8
C11orf54-212ENST00000533154 Q6ZT83 130 aa3.81□□□□□ -1.8
C11orf54-212ENST00000533154 LINC00311Q8N616 119 aa3.81□□□□□ -1.8
C11orf54-212ENST00000533154 C8orf31Q8N9H6 132 aa3.81□□□□□ -1.8
C11orf54-212ENST00000533154 C10orf105Q8TEF2 133 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms