RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 VPS13BQ7Z7G8 4022 aa7.68□□□□□ -1.18
TRAPPC4-213ENST00000533149 TRAV26-1A0A087WT03 109 aa7.68□□□□□ -1.18
TRAPPC4-213ENST00000533149 IGHV3-38A0A0C4DH36 116 aa7.68□□□□□ -1.18
TRAPPC4-213ENST00000533149 A0A0J9YY99 117 aa7.68□□□□□ -1.18
TRAPPC4-213ENST00000533149 IFITM10A6NMD0 228 aa7.68□□□□□ -1.18
TRAPPC4-213ENST00000533149 I3L3M4 83 aa7.68□□□□□ -1.18
TRAPPC4-213ENST00000533149 GYPEP15421 78 aa7.68□□□□□ -1.18
TRAPPC4-213ENST00000533149 UBE2D3P61077 147 aa7.68□□□□□ -1.18
TRAPPC4-213ENST00000533149 UBE2D2P62837 147 aa7.68□□□□□ -1.18
TRAPPC4-213ENST00000533149 PMCHL1Q16048 86 aa7.68□□□□□ -1.18
TRAPPC4-213ENST00000533149 KIR2DL4Q99706 377 aa7.68□□□□□ -1.18
TRAPPC4-213ENST00000533149 MRPS16Q9Y3D3 137 aaKnown RBP7.68□□□□□ -1.18
TRAPPC4-213ENST00000533149 IGHV1-24A0A0C4DH33 117 aa7.67□□□□□ -1.18
TRAPPC4-213ENST00000533149 TSHBP01222 138 aa7.67□□□□□ -1.18
TRAPPC4-213ENST00000533149 FCER1GP30273 86 aa7.67□□□□□ -1.18
TRAPPC4-213ENST00000533149 AMTP48728 403 aa7.67□□□□□ -1.18
TRAPPC4-213ENST00000533149 ESRGQ1W209 222 aa7.67□□□□□ -1.18
TRAPPC4-213ENST00000533149 HMCN2Q8NDA2 5059 aa7.66□□□□□ -1.18
TRAPPC4-213ENST00000533149 LOC105371267A0A1B0GV96 52 aa7.66□□□□□ -1.18
TRAPPC4-213ENST00000533149 K7EMI3 77 aa7.66□□□□□ -1.18
TRAPPC4-213ENST00000533149 FABP4P15090 132 aa7.66□□□□□ -1.18
TRAPPC4-213ENST00000533149 ORMDL2Q53FV1 153 aa7.66□□□□□ -1.18
TRAPPC4-213ENST00000533149 DAZ4Q86SG3 579 aaKnown RBP7.66□□□□□ -1.18
TRAPPC4-213ENST00000533149 NFE4Q86UQ8 179 aa7.66□□□□□ -1.18
TRAPPC4-213ENST00000533149 TMEM18Q96B42 140 aa7.66□□□□□ -1.18
TRAPPC4-213ENST00000533149 HIST1H2BLQ99880 126 aa7.66□□□□□ -1.18
TRAPPC4-213ENST00000533149 DAZ3Q9NR90 486 aaKnown RBP7.66□□□□□ -1.18
TRAPPC4-213ENST00000533149 A0A087WTM6 91 aa7.65□□□□□ -1.18
TRAPPC4-213ENST00000533149 A0A096LNJ9 63 aa7.65□□□□□ -1.18
TRAPPC4-213ENST00000533149 LINC00694P0DN24 101 aa7.65□□□□□ -1.18
TRAPPC4-213ENST00000533149 HAMPP81172 84 aa7.65□□□□□ -1.18
TRAPPC4-213ENST00000533149 COTL1Q14019 142 aa7.65□□□□□ -1.18
TRAPPC4-213ENST00000533149 ATP6V0E2Q8NHE4 81 aa7.65□□□□□ -1.18
TRAPPC4-213ENST00000533149 PACRGQ96M98 296 aaPredicted RBP7.65□□□□□ -1.18
TRAPPC4-213ENST00000533149 HBDP02042 147 aa7.64□□□□□ -1.19
TRAPPC4-213ENST00000533149 NTM-AS1Q6ZSK4 140 aa7.64□□□□□ -1.19
TRAPPC4-213ENST00000533149 A0A096LPF7 62 aa7.63□□□□□ -1.19
TRAPPC4-213ENST00000533149 H3BNG1 76 aa7.63□□□□□ -1.19
TRAPPC4-213ENST00000533149 OXTP01178 125 aa7.63□□□□□ -1.19
TRAPPC4-213ENST00000533149 DNAH10OSP0CZ25 163 aa7.63□□□□□ -1.19
TRAPPC4-213ENST00000533149 G0S2P27469 103 aa7.63□□□□□ -1.19
TRAPPC4-213ENST00000533149 MRPL23Q16540 153 aaKnown RBP7.63□□□□□ -1.19
TRAPPC4-213ENST00000533149 LINC00173Q6ZV60 143 aa7.63□□□□□ -1.19
TRAPPC4-213ENST00000533149 OR10D4PQ8NGN7 298 aa7.63□□□□□ -1.19
TRAPPC4-213ENST00000533149 ICOSQ9Y6W8 199 aa7.63□□□□□ -1.19
TRAPPC4-213ENST00000533149 SIVA1O15304 175 aa7.62□□□□□ -1.19
TRAPPC4-213ENST00000533149 LEPROTL1O95214 131 aa7.62□□□□□ -1.19
TRAPPC4-213ENST00000533149 C2orf66Q6UXQ4 117 aa7.62□□□□□ -1.19
TRAPPC4-213ENST00000533149 TOMM6Q96B49 74 aa7.62□□□□□ -1.19
TRAPPC4-213ENST00000533149 CHCHD7Q9BUK0 85 aa7.62□□□□□ -1.19
TRAPPC4-213ENST00000533149 GTSF1LQ9H1H1 148 aa7.62□□□□□ -1.19
TRAPPC4-213ENST00000533149 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC4-213ENST00000533149 RPL39P62891 51 aaKnown RBP7.61□□□□□ -1.19
TRAPPC4-213ENST00000533149 TMEM97Q5BJF2 176 aa7.61□□□□□ -1.19
TRAPPC4-213ENST00000533149 SH2D6Q7Z4S9 175 aa7.61□□□□□ -1.19
TRAPPC4-213ENST00000533149 C20orf203Q8NBC4 194 aa7.61□□□□□ -1.19
TRAPPC4-213ENST00000533149 SCGB3A1Q96QR1 104 aa7.61□□□□□ -1.19
TRAPPC4-213ENST00000533149 HSPB8Q9UJY1 196 aa7.61□□□□□ -1.19
TRAPPC4-213ENST00000533149 CYSLTR1Q9Y271 337 aa7.61□□□□□ -1.19
TRAPPC4-213ENST00000533149 AKR1D1P51857 326 aa7.6□□□□□ -1.19
TRAPPC4-213ENST00000533149 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC4-213ENST00000533149 IGLV5-52A0A0A0MRZ9 124 aa7.59□□□□□ -1.19
TRAPPC4-213ENST00000533149 TRBV6-8A0A0A6YYG3 113 aa7.59□□□□□ -1.19
TRAPPC4-213ENST00000533149 IGKV2-29A2NJV5 120 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC4-213ENST00000533149 IFI27L1Q96BM0 104 aa7.59□□□□□ -1.19
TRAPPC4-213ENST00000533149 TMEM243Q9BU79 118 aa7.59□□□□□ -1.19
TRAPPC4-213ENST00000533149 TRBV25-1A0A075B6N4 114 aa7.58□□□□□ -1.2
TRAPPC4-213ENST00000533149 TRAV9-2A0A087WT02 112 aa7.58□□□□□ -1.2
TRAPPC4-213ENST00000533149 LINC01549A6NIU2 74 aa7.58□□□□□ -1.2
TRAPPC4-213ENST00000533149 IGIPA6NJ69 53 aa7.58□□□□□ -1.2
TRAPPC4-213ENST00000533149 ATP5LO75964 103 aa7.58□□□□□ -1.2
TRAPPC4-213ENST00000533149 C3orf79P0CE67 100 aa7.58□□□□□ -1.2
TRAPPC4-213ENST00000533149 KRTDAPP60985 99 aa7.58□□□□□ -1.2
TRAPPC4-213ENST00000533149 LYPD5Q6UWN5 251 aa7.58□□□□□ -1.2
TRAPPC4-213ENST00000533149 ERASQ7Z444 233 aa7.58□□□□□ -1.2
TRAPPC4-213ENST00000533149 LINC00528Q8N1L1 170 aa7.58□□□□□ -1.2
TRAPPC4-213ENST00000533149 NTN5Q8WTR8 489 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC4-213ENST00000533149 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.57□□□□□ -1.2
TRAPPC4-213ENST00000533149 TMEM141Q96I45 108 aa7.57□□□□□ -1.2
TRAPPC4-213ENST00000533149 MAP1LC3CQ9BXW4 147 aa7.57□□□□□ -1.2
TRAPPC4-213ENST00000533149 SYS1-DBNDD2H3BUS1 97 aa7.56□□□□□ -1.2
TRAPPC4-213ENST00000533149 PRSS1P07477 247 aa7.56□□□□□ -1.2
TRAPPC4-213ENST00000533149 TIRAPP58753 221 aa7.56□□□□□ -1.2
TRAPPC4-213ENST00000533149 GAGE6Q13070 117 aa7.56□□□□□ -1.2
TRAPPC4-213ENST00000533149 TIMM17AQ99595 171 aa7.56□□□□□ -1.2
TRAPPC4-213ENST00000533149 OPRPNQ99935 248 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC4-213ENST00000533149 CHCHD5Q9BSY4 110 aa7.56□□□□□ -1.2
TRAPPC4-213ENST00000533149 PYGO1Q9Y3Y4 419 aa7.56□□□□□ -1.2
TRAPPC4-213ENST00000533149 H7C423 109 aa7.55□□□□□ -1.2
TRAPPC4-213ENST00000533149 K7EP13 123 aa7.55□□□□□ -1.2
TRAPPC4-213ENST00000533149 UBE2L6O14933 153 aa7.55□□□□□ -1.2
TRAPPC4-213ENST00000533149 FGF6P10767 208 aa7.55□□□□□ -1.2
TRAPPC4-213ENST00000533149 LELP1Q5T871 98 aa7.55□□□□□ -1.2
TRAPPC4-213ENST00000533149 PET117Q6UWS5 81 aa7.55□□□□□ -1.2
TRAPPC4-213ENST00000533149 Q6ZN92 141 aa7.55□□□□□ -1.2
TRAPPC4-213ENST00000533149 TIMM21Q9BVV7 248 aa7.55□□□□□ -1.2
TRAPPC4-213ENST00000533149 SPANXA1Q9NS26 97 aa7.55□□□□□ -1.2
TRAPPC4-213ENST00000533149 UBE2D4Q9Y2X8 147 aa7.55□□□□□ -1.2
TRAPPC4-213ENST00000533149 TMEM262E9PQX1 116 aa7.54□□□□□ -1.2
TRAPPC4-213ENST00000533149 H0Y8G0 127 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms