RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 TMEM141Q96I45 108 aa9.83□□□□□ -0.84
TRIM3-212ENST00000533064 TMEM243Q9BU79 118 aa9.83□□□□□ -0.84
TRIM3-212ENST00000533064 LELP1Q5T871 98 aa9.83□□□□□ -0.84
TRIM3-212ENST00000533064 NTM-AS1Q6ZSK4 140 aa9.83□□□□□ -0.84
TRIM3-212ENST00000533064 DYNC2H1Q8NCM8 4307 aaKnown RBP9.82□□□□□ -0.84
TRIM3-212ENST00000533064 A0A087WX48 190 aa9.82□□□□□ -0.84
TRIM3-212ENST00000533064 HSBP1L1C9JCN9 74 aa9.82□□□□□ -0.84
TRIM3-212ENST00000533064 CCL18P55774 89 aa9.82□□□□□ -0.84
TRIM3-212ENST00000533064 MAJINQ3KP22 176 aa9.82□□□□□ -0.84
TRIM3-212ENST00000533064 BAALCQ8WXS3 180 aa9.82□□□□□ -0.84
TRIM3-212ENST00000533064 C2orf88Q9BSF0 95 aa9.82□□□□□ -0.84
TRIM3-212ENST00000533064 CHCHD5Q9BSY4 110 aa9.82□□□□□ -0.84
TRIM3-212ENST00000533064 TRAV8-6A0A0B4J262 113 aa9.81□□□□□ -0.84
TRIM3-212ENST00000533064 SMAGPQ0VAQ4 97 aa9.81□□□□□ -0.84
TRIM3-212ENST00000533064 CHCHD7Q9BUK0 85 aa9.81□□□□□ -0.84
TRIM3-212ENST00000533064 APLNQ9ULZ1 77 aa9.81□□□□□ -0.84
TRIM3-212ENST00000533064 ESRGQ1W209 222 aa9.8□□□□□ -0.84
TRIM3-212ENST00000533064 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.8□□□□□ -0.84
TRIM3-212ENST00000533064 hDV102S1A0JD36 115 aa9.8□□□□□ -0.84
TRIM3-212ENST00000533064 IGKV2-29A2NJV5 120 aaPredicted RBP9.8□□□□□ -0.84
TRIM3-212ENST00000533064 H7C423 109 aa9.8□□□□□ -0.84
TRIM3-212ENST00000533064 PYGO1Q9Y3Y4 419 aa9.8□□□□□ -0.84
TRIM3-212ENST00000533064 F8VRH5 84 aa9.79□□□□□ -0.84
TRIM3-212ENST00000533064 C3orf84H3BNL1 204 aa9.79□□□□□ -0.84
TRIM3-212ENST00000533064 DPM2O94777 84 aa9.79□□□□□ -0.84
TRIM3-212ENST00000533064 IGKCP01834 107 aa9.79□□□□□ -0.84
TRIM3-212ENST00000533064 DDTP30046 118 aa9.79□□□□□ -0.84
TRIM3-212ENST00000533064 AMMECR1LQ6DCA0 310 aa9.79□□□□□ -0.84
TRIM3-212ENST00000533064 MRPL35Q9NZE8 188 aaKnown RBP9.79□□□□□ -0.84
TRIM3-212ENST00000533064 CHTOPQ9Y3Y2 248 aaKnown RBP9.79□□□□□ -0.84
TRIM3-212ENST00000533064 STARD9Q9P2P6 4700 aa9.78□□□□□ -0.84
TRIM3-212ENST00000533064 PRSS29PA6NIE9 313 aa9.78□□□□□ -0.84
TRIM3-212ENST00000533064 TMEM262E9PQX1 116 aa9.78□□□□□ -0.84
TRIM3-212ENST00000533064 NPSP0C0P6 89 aa9.78□□□□□ -0.84
TRIM3-212ENST00000533064 PLNP26678 52 aa9.78□□□□□ -0.84
TRIM3-212ENST00000533064 PMVKQ15126 192 aa9.78□□□□□ -0.84
TRIM3-212ENST00000533064 IGLC3P0DOY3 106 aa9.77□□□□□ -0.84
TRIM3-212ENST00000533064 GAGE6Q13070 117 aa9.77□□□□□ -0.84
TRIM3-212ENST00000533064 PAPPA-AS1Q5QFB9 102 aa9.77□□□□□ -0.84
TRIM3-212ENST00000533064 DGAT2L7PQ6IED9 249 aa9.77□□□□□ -0.84
TRIM3-212ENST00000533064 UBE2DNLQ8IWF7 75 aa9.77□□□□□ -0.84
TRIM3-212ENST00000533064 MIEN1Q9BRT3 115 aa9.77□□□□□ -0.84
TRIM3-212ENST00000533064 SPANXA1Q9NS26 97 aa9.77□□□□□ -0.84
TRIM3-212ENST00000533064 C14orf144Q96I85 54 aa9.77□□□□□ -0.85
TRIM3-212ENST00000533064 TMEM101Q96IK0 257 aa9.77□□□□□ -0.85
TRIM3-212ENST00000533064 CST9LQ9H4G1 147 aa9.77□□□□□ -0.85
TRIM3-212ENST00000533064 MRPS16Q9Y3D3 137 aaKnown RBP9.77□□□□□ -0.85
TRIM3-212ENST00000533064 IGLV4-3A0A075B6K6 122 aa9.76□□□□□ -0.85
TRIM3-212ENST00000533064 FGF6P10767 208 aa9.76□□□□□ -0.85
TRIM3-212ENST00000533064 UQCR10Q9UDW1 63 aa9.76□□□□□ -0.85
TRIM3-212ENST00000533064 UBE2D4Q9Y2X8 147 aa9.76□□□□□ -0.85
TRIM3-212ENST00000533064 LINC00588Q9Y4M8 146 aa9.76□□□□□ -0.85
TRIM3-212ENST00000533064 A0A1B0GV90 55 aa9.75□□□□□ -0.85
TRIM3-212ENST00000533064 ZNF25P17030 456 aaPredicted RBP9.75□□□□□ -0.85
TRIM3-212ENST00000533064 CASC10Q5T4H9 136 aa9.75□□□□□ -0.85
TRIM3-212ENST00000533064 MRPL52Q86TS9 123 aaKnown RBP9.75□□□□□ -0.85
TRIM3-212ENST00000533064 TIMM21Q9BVV7 248 aa9.75□□□□□ -0.85
TRIM3-212ENST00000533064 PLECQ15149 4684 aaKnown RBP9.75□□□□□ -0.85
TRIM3-212ENST00000533064 STPG4Q8N801 248 aa9.74□□□□□ -0.85
TRIM3-212ENST00000533064 OR5A1Q8NGJ0 315 aa9.74□□□□□ -0.85
TRIM3-212ENST00000533064 OPRPNQ99935 248 aaPredicted RBP9.74□□□□□ -0.85
TRIM3-212ENST00000533064 WFDC10BQ8IUB3 73 aa9.74□□□□□ -0.85
TRIM3-212ENST00000533064 VCX2Q9H322 139 aa9.74□□□□□ -0.85
TRIM3-212ENST00000533064 CSDC2Q9Y534 153 aaKnown RBP9.74□□□□□ -0.85
TRIM3-212ENST00000533064 A0A1B0GUV1 79 aa9.73□□□□□ -0.85
TRIM3-212ENST00000533064 SIVA1O15304 175 aa9.73□□□□□ -0.85
TRIM3-212ENST00000533064 MPV17L2Q567V2 206 aa9.73□□□□□ -0.85
TRIM3-212ENST00000533064 ZC2HC1BQ5TFG8 222 aa9.73□□□□□ -0.85
TRIM3-212ENST00000533064 FAM104AQ969W3 186 aa9.73□□□□□ -0.85
TRIM3-212ENST00000533064 AMELXQ99217 191 aa9.73□□□□□ -0.85
TRIM3-212ENST00000533064 UPK3BQ9BT76 320 aa9.73□□□□□ -0.85
TRIM3-212ENST00000533064 LYSTQ99698 3801 aa9.72□□□□□ -0.85
TRIM3-212ENST00000533064 IGLV4-69A0A075B6H9 119 aa9.72□□□□□ -0.85
TRIM3-212ENST00000533064 MRPS36P82909 103 aaKnown RBP9.72□□□□□ -0.85
TRIM3-212ENST00000533064 RBX1P62877 108 aa9.71□□□□□ -0.85
TRIM3-212ENST00000533064 IGHV3-30P01768 117 aa9.71□□□□□ -0.86
TRIM3-212ENST00000533064 IGHV3-33P01772 117 aa9.71□□□□□ -0.86
TRIM3-212ENST00000533064 IGHV3-30-3P0DP02 117 aa9.71□□□□□ -0.86
TRIM3-212ENST00000533064 IGHV3-30-5P0DP03 117 aa9.71□□□□□ -0.86
TRIM3-212ENST00000533064 COX8AP10176 69 aa9.71□□□□□ -0.86
TRIM3-212ENST00000533064 SLC25A34Q6PIV7 304 aa9.71□□□□□ -0.86
TRIM3-212ENST00000533064 C11orf86A6NJI1 115 aa9.7□□□□□ -0.86
TRIM3-212ENST00000533064 ANGP03950 147 aaKnown RBP9.7□□□□□ -0.86
TRIM3-212ENST00000533064 LINC01556Q5JQF7 62 aa9.7□□□□□ -0.86
TRIM3-212ENST00000533064 Q6ZUT4 128 aa9.7□□□□□ -0.86
TRIM3-212ENST00000533064 NFE4Q86UQ8 179 aa9.7□□□□□ -0.86
TRIM3-212ENST00000533064 Q9H8V8 135 aa9.7□□□□□ -0.86
TRIM3-212ENST00000533064 IGLV4-60A0A075B6I1 120 aa9.69□□□□□ -0.86
TRIM3-212ENST00000533064 DNAH10OSP0CZ25 163 aa9.69□□□□□ -0.86
TRIM3-212ENST00000533064 CDC42SE2Q9NRR3 84 aa9.69□□□□□ -0.86
TRIM3-212ENST00000533064 HNRNPA3P51991 378 aaKnown RBP9.68□□□□□ -0.86
TRIM3-212ENST00000533064 PCP4P48539 62 aa9.67□□□□□ -0.86
TRIM3-212ENST00000533064 NMUP48645 174 aa9.67□□□□□ -0.86
TRIM3-212ENST00000533064 RNASE13Q5GAN3 156 aaKnown RBP9.67□□□□□ -0.86
TRIM3-212ENST00000533064 Q8N3U1 123 aa9.67□□□□□ -0.86
TRIM3-212ENST00000533064 C10orf126Q8N4M7 172 aa9.67□□□□□ -0.86
TRIM3-212ENST00000533064 CHAC1Q9BUX1 264 aa9.67□□□□□ -0.86
TRIM3-212ENST00000533064 KLK12Q9UKR0 248 aa9.67□□□□□ -0.86
TRIM3-212ENST00000533064 IGKV2D-26A0A0A0MRZ7 120 aa9.66□□□□□ -0.86
TRIM3-212ENST00000533064 A0A0J9YXV3 536 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms