RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 USP17L23D6RBM5 183 aa6.64□□□□□ -1.35
CHMP4A-206ENST00000533011 CKS2P33552 79 aa6.64□□□□□ -1.35
CHMP4A-206ENST00000533011 HAMPP81172 84 aa6.64□□□□□ -1.35
CHMP4A-206ENST00000533011 BTF3L4Q96K17 158 aa6.64□□□□□ -1.35
CHMP4A-206ENST00000533011 C20orf78Q9BR46 151 aa6.64□□□□□ -1.35
CHMP4A-206ENST00000533011 TRBV24-1A0A075B6N3 115 aa6.63□□□□□ -1.35
CHMP4A-206ENST00000533011 C7orf77A4D0Y5 90 aa6.63□□□□□ -1.35
CHMP4A-206ENST00000533011 FCER1GP30273 86 aa6.63□□□□□ -1.35
CHMP4A-206ENST00000533011 LRP2P98164 4655 aa6.63□□□□□ -1.35
CHMP4A-206ENST00000533011 TMEM101Q96IK0 257 aa6.63□□□□□ -1.35
CHMP4A-206ENST00000533011 KIR2DL4Q99706 377 aa6.63□□□□□ -1.35
CHMP4A-206ENST00000533011 IGKV3OR2-268A0A0C4DH90 116 aa6.62□□□□□ -1.35
CHMP4A-206ENST00000533011 TMEM218A2RU14 115 aa6.62□□□□□ -1.35
CHMP4A-206ENST00000533011 TNFRSF6BO95407 300 aa6.62□□□□□ -1.35
CHMP4A-206ENST00000533011 PPBPP02775 128 aa6.62□□□□□ -1.35
CHMP4A-206ENST00000533011 PRSS1P07477 247 aa6.62□□□□□ -1.35
CHMP4A-206ENST00000533011 RPL32P62910 135 aaKnown RBP6.62□□□□□ -1.35
CHMP4A-206ENST00000533011 DGAT2L7PQ6IED9 249 aa6.62□□□□□ -1.35
CHMP4A-206ENST00000533011 MRPL52Q86TS9 123 aaKnown RBP6.62□□□□□ -1.35
CHMP4A-206ENST00000533011 CLRN3Q8NCR9 226 aa6.62□□□□□ -1.35
CHMP4A-206ENST00000533011 OR5A1Q8NGJ0 315 aa6.62□□□□□ -1.35
CHMP4A-206ENST00000533011 FAM30AQ9NZY2 134 aa6.62□□□□□ -1.35
CHMP4A-206ENST00000533011 D6R8Y8 96 aa6.61□□□□□ -1.35
CHMP4A-206ENST00000533011 PHOX2AO14813 284 aa6.61□□□□□ -1.35
CHMP4A-206ENST00000533011 TCAPO15273 167 aa6.61□□□□□ -1.35
CHMP4A-206ENST00000533011 ADCYAP1P18509 176 aa6.61□□□□□ -1.35
CHMP4A-206ENST00000533011 SMAGPQ0VAQ4 97 aa6.61□□□□□ -1.35
CHMP4A-206ENST00000533011 LINC01620Q4KN68 170 aa6.61□□□□□ -1.35
CHMP4A-206ENST00000533011 GAGE12HA6NDE8 117 aa6.6□□□□□ -1.35
CHMP4A-206ENST00000533011 TMEM136Q6ZRR5 245 aa6.6□□□□□ -1.35
CHMP4A-206ENST00000533011 Q6ZSA8 131 aa6.6□□□□□ -1.35
CHMP4A-206ENST00000533011 ORMDL3Q8N138 153 aa6.6□□□□□ -1.35
CHMP4A-206ENST00000533011 ZNF664Q8N3J9 261 aa6.6□□□□□ -1.35
CHMP4A-206ENST00000533011 CHCHD10Q8WYQ3 142 aaPredicted RBP6.6□□□□□ -1.35
CHMP4A-206ENST00000533011 TMEM18Q96B42 140 aa6.6□□□□□ -1.35
CHMP4A-206ENST00000533011 IMMP2LQ96T52 175 aa6.6□□□□□ -1.35
CHMP4A-206ENST00000533011 SEC11CQ9BY50 192 aa6.6□□□□□ -1.35
CHMP4A-206ENST00000533011 CDC42SE2Q9NRR3 84 aa6.6□□□□□ -1.35
CHMP4A-206ENST00000533011 CSDC2Q9Y534 153 aaKnown RBP6.6□□□□□ -1.35
CHMP4A-206ENST00000533011 FAT3Q8TDW7 4589 aa6.6□□□□□ -1.35
CHMP4A-206ENST00000533011 DNAH8Q96JB1 4490 aa6.6□□□□□ -1.35
CHMP4A-206ENST00000533011 hDV102S1A0JD36 115 aa6.59□□□□□ -1.35
CHMP4A-206ENST00000533011 NPYP01303 97 aa6.59□□□□□ -1.35
CHMP4A-206ENST00000533011 COMMD7Q86VX2 200 aa6.59□□□□□ -1.35
CHMP4A-206ENST00000533011 PRELID3AQ96N28 172 aa6.59□□□□□ -1.35
CHMP4A-206ENST00000533011 SMIM2Q9BVW6 85 aa6.59□□□□□ -1.35
CHMP4A-206ENST00000533011 KRTAP9-2Q9BYQ4 174 aa6.59□□□□□ -1.35
CHMP4A-206ENST00000533011 CTDSP1Q9GZU7 261 aa6.59□□□□□ -1.35
CHMP4A-206ENST00000533011 UBE2D4Q9Y2X8 147 aa6.59□□□□□ -1.35
CHMP4A-206ENST00000533011 LINC00959A0A1B0GUT2 108 aa6.58□□□□□ -1.36
CHMP4A-206ENST00000533011 SS18Q15532 418 aa6.58□□□□□ -1.36
CHMP4A-206ENST00000533011 CFAP161Q6P656 301 aa6.58□□□□□ -1.36
CHMP4A-206ENST00000533011 C9orf163Q8N9P6 203 aa6.58□□□□□ -1.36
CHMP4A-206ENST00000533011 TIMM21Q9BVV7 248 aa6.58□□□□□ -1.36
CHMP4A-206ENST00000533011 AP5S1Q9NUS5 200 aa6.58□□□□□ -1.36
CHMP4A-206ENST00000533011 CCL25O15444 150 aa6.57□□□□□ -1.36
CHMP4A-206ENST00000533011 XCL1P47992 114 aa6.57□□□□□ -1.36
CHMP4A-206ENST00000533011 CNBPP62633 177 aaKnown RBP6.57□□□□□ -1.36
CHMP4A-206ENST00000533011 LAMTOR2Q9Y2Q5 125 aa6.57□□□□□ -1.36
CHMP4A-206ENST00000533011 TRAV9-1A0A075B6T8 112 aa6.56□□□□□ -1.36
CHMP4A-206ENST00000533011 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.56□□□□□ -1.36
CHMP4A-206ENST00000533011 KRTAP9-6A0A140TA67 174 aa6.56□□□□□ -1.36
CHMP4A-206ENST00000533011 PRSS47A8MTI9 375 aa6.56□□□□□ -1.36
CHMP4A-206ENST00000533011 C1orf196B1AJZ1 125 aa6.56□□□□□ -1.36
CHMP4A-206ENST00000533011 RAB5AP20339 215 aa6.56□□□□□ -1.36
CHMP4A-206ENST00000533011 KRTAP10-4P60372 401 aaPredicted RBP6.56□□□□□ -1.36
CHMP4A-206ENST00000533011 FOXI1Q12951 378 aa6.56□□□□□ -1.36
CHMP4A-206ENST00000533011 C15orf56Q8N910 161 aa6.56□□□□□ -1.36
CHMP4A-206ENST00000533011 CHAC1Q9BUX1 264 aa6.56□□□□□ -1.36
CHMP4A-206ENST00000533011 SLPIP03973 132 aa6.55□□□□□ -1.36
CHMP4A-206ENST00000533011 S100PP25815 95 aa6.55□□□□□ -1.36
CHMP4A-206ENST00000533011 RPL39P62891 51 aaKnown RBP6.55□□□□□ -1.36
CHMP4A-206ENST00000533011 C10orf91Q5T1B1 145 aa6.55□□□□□ -1.36
CHMP4A-206ENST00000533011 CD164L2Q6UWJ8 174 aa6.55□□□□□ -1.36
CHMP4A-206ENST00000533011 SCXQ7RTU7 201 aa6.55□□□□□ -1.36
CHMP4A-206ENST00000533011 MAP1LC3AQ9H492 121 aa6.55□□□□□ -1.36
CHMP4A-206ENST00000533011 GVQW2A0A096LPI5 108 aaPredicted RBP6.54□□□□□ -1.36
CHMP4A-206ENST00000533011 LOC389332A0A1B0GUA5 103 aa6.54□□□□□ -1.36
CHMP4A-206ENST00000533011 RNASE13Q5GAN3 156 aaKnown RBP6.54□□□□□ -1.36
CHMP4A-206ENST00000533011 SDIM1Q6ZPB5 146 aa6.54□□□□□ -1.36
CHMP4A-206ENST00000533011 Q6ZUT4 128 aa6.54□□□□□ -1.36
CHMP4A-206ENST00000533011 SPANXA1Q9NS26 97 aa6.54□□□□□ -1.36
CHMP4A-206ENST00000533011 CARHSP1Q9Y2V2 147 aaKnown RBP6.54□□□□□ -1.36
CHMP4A-206ENST00000533011 IGHV3-64A0A075B6Q5 118 aa6.53□□□□□ -1.36
CHMP4A-206ENST00000533011 TRAV13-1A0A0B4J241 112 aa6.53□□□□□ -1.36
CHMP4A-206ENST00000533011 IGHV1-58A0A0C4DH39 117 aa6.53□□□□□ -1.36
CHMP4A-206ENST00000533011 MRPS36P82909 103 aaKnown RBP6.53□□□□□ -1.36
CHMP4A-206ENST00000533011 RHEBQ15382 184 aa6.53□□□□□ -1.36
CHMP4A-206ENST00000533011 HIGD2BQ4VC39 106 aa6.53□□□□□ -1.36
CHMP4A-206ENST00000533011 Q8N8P6 123 aa6.53□□□□□ -1.36
CHMP4A-206ENST00000533011 CIRBP-AS1Q8TBR5 109 aa6.53□□□□□ -1.36
CHMP4A-206ENST00000533011 PKHD1L1Q86WI1 4243 aa6.52□□□□□ -1.37
CHMP4A-206ENST00000533011 K7EMI3 77 aa6.52□□□□□ -1.37
CHMP4A-206ENST00000533011 IFI27P40305 119 aaPredicted RBP6.52□□□□□ -1.37
CHMP4A-206ENST00000533011 FAM104AQ969W3 186 aa6.52□□□□□ -1.37
CHMP4A-206ENST00000533011 GNB1LQ9BYB4 327 aa6.52□□□□□ -1.37
CHMP4A-206ENST00000533011 RPS10P5Q9NQ39 176 aa6.52□□□□□ -1.37
CHMP4A-206ENST00000533011 PYGO1Q9Y3Y4 419 aa6.52□□□□□ -1.37
CHMP4A-206ENST00000533011 ZNF561-AS1K7EIQ3 104 aa6.51□□□□□ -1.37
CHMP4A-206ENST00000533011 COX7A2LO14548 114 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms