RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 IGLV1-50A0A075B6I6 118 aa8.7□□□□□ -1.02
CDC27-209ENST00000532893 RAB19A4D1S5 217 aa8.7□□□□□ -1.02
CDC27-209ENST00000532893 SDHAF1A6NFY7 115 aa8.7□□□□□ -1.02
CDC27-209ENST00000532893 H0Y9J4 135 aa8.7□□□□□ -1.02
CDC27-209ENST00000532893 RPL18AQ02543 176 aaKnown RBP8.7□□□□□ -1.02
CDC27-209ENST00000532893 A0A087WZ39 114 aa8.69□□□□□ -1.02
CDC27-209ENST00000532893 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.69□□□□□ -1.02
CDC27-209ENST00000532893 ARPC5O15511 151 aa8.69□□□□□ -1.02
CDC27-209ENST00000532893 APOMO95445 188 aa8.69□□□□□ -1.02
CDC27-209ENST00000532893 PMCHP20382 165 aa8.69□□□□□ -1.02
CDC27-209ENST00000532893 MALP21145 153 aa8.69□□□□□ -1.02
CDC27-209ENST00000532893 EIF5AP63241 154 aaKnown RBP8.69□□□□□ -1.02
CDC27-209ENST00000532893 MEF2BQ02080 365 aaPredicted RBP8.69□□□□□ -1.02
CDC27-209ENST00000532893 CAMK2N2Q96S95 79 aa8.69□□□□□ -1.02
CDC27-209ENST00000532893 KRTAP4-8Q9BYQ9 185 aa8.69□□□□□ -1.02
CDC27-209ENST00000532893 FOXA3P55318 350 aaPredicted RBP8.68□□□□□ -1.02
CDC27-209ENST00000532893 EIF5AL1Q6IS14 154 aaKnown RBP8.68□□□□□ -1.02
CDC27-209ENST00000532893 C11orf52Q96A22 123 aa8.68□□□□□ -1.02
CDC27-209ENST00000532893 OPRPNQ99935 248 aaPredicted RBP8.68□□□□□ -1.02
CDC27-209ENST00000532893 UMAD1C9J7I0 102 aa8.67□□□□□ -1.02
CDC27-209ENST00000532893 G3V3Q6 166 aa8.67□□□□□ -1.02
CDC27-209ENST00000532893 KRTAP1-4P0C5Y4 121 aa8.67□□□□□ -1.02
CDC27-209ENST00000532893 CTRLP40313 264 aa8.67□□□□□ -1.02
CDC27-209ENST00000532893 GNG4P50150 75 aa8.67□□□□□ -1.02
CDC27-209ENST00000532893 CCL20P78556 96 aa8.67□□□□□ -1.02
CDC27-209ENST00000532893 KRTAP11-1Q8IUC1 163 aa8.67□□□□□ -1.02
CDC27-209ENST00000532893 CDC42SE2Q9NRR3 84 aa8.67□□□□□ -1.02
CDC27-209ENST00000532893 I3L3M4 83 aa8.66□□□□□ -1.02
CDC27-209ENST00000532893 COX7A2LO14548 114 aa8.66□□□□□ -1.02
CDC27-209ENST00000532893 BCL2L11O43521 198 aa8.66□□□□□ -1.02
CDC27-209ENST00000532893 ESDP10768 282 aa8.66□□□□□ -1.02
CDC27-209ENST00000532893 CNFNQ9BYD5 112 aa8.66□□□□□ -1.02
CDC27-209ENST00000532893 GNG13Q9P2W3 67 aa8.66□□□□□ -1.02
CDC27-209ENST00000532893 TRAV1-1A0A0B4J248 108 aa8.65□□□□□ -1.02
CDC27-209ENST00000532893 UBE2D1P51668 147 aa8.65□□□□□ -1.02
CDC27-209ENST00000532893 NUDT10Q8NFP7 164 aa8.65□□□□□ -1.02
CDC27-209ENST00000532893 NUDT11Q96G61 164 aa8.65□□□□□ -1.02
CDC27-209ENST00000532893 C2orf48Q96LS8 159 aa8.65□□□□□ -1.02
CDC27-209ENST00000532893 C1orf196B1AJZ1 125 aa8.64□□□□□ -1.03
CDC27-209ENST00000532893 TSHBP01222 138 aa8.64□□□□□ -1.03
CDC27-209ENST00000532893 TEX261Q6UWH6 196 aa8.64□□□□□ -1.03
CDC27-209ENST00000532893 SMIM15Q7Z3B0 74 aa8.64□□□□□ -1.03
CDC27-209ENST00000532893 SMIM12Q96EX1 92 aa8.64□□□□□ -1.03
CDC27-209ENST00000532893 MRAP2Q96G30 205 aa8.64□□□□□ -1.03
CDC27-209ENST00000532893 MANBALQ9NQG1 85 aa8.64□□□□□ -1.03
CDC27-209ENST00000532893 TMEM242Q9NWH2 141 aa8.64□□□□□ -1.03
CDC27-209ENST00000532893 TRBV20OR9-2A0A075B6H5 130 aa8.63□□□□□ -1.03
CDC27-209ENST00000532893 FAM168BA1KXE4 195 aa8.63□□□□□ -1.03
CDC27-209ENST00000532893 C5orf38Q86SI9 138 aa8.63□□□□□ -1.03
CDC27-209ENST00000532893 MRPL52Q86TS9 123 aaKnown RBP8.63□□□□□ -1.03
CDC27-209ENST00000532893 BIN3Q9NQY0 253 aa8.63□□□□□ -1.03
CDC27-209ENST00000532893 TSPAN13O95857 204 aa8.62□□□□□ -1.03
CDC27-209ENST00000532893 RPL13AP40429 203 aaKnown RBP8.62□□□□□ -1.03
CDC27-209ENST00000532893 TRBV6-5A0A0K0K1A5 114 aa8.61□□□□□ -1.03
CDC27-209ENST00000532893 RNF151Q2KHN1 245 aa8.61□□□□□ -1.03
CDC27-209ENST00000532893 TSKUQ8WUA8 353 aa8.61□□□□□ -1.03
CDC27-209ENST00000532893 RNASE7Q9H1E1 156 aaKnown RBP8.61□□□□□ -1.03
CDC27-209ENST00000532893 ST20Q9HBF5 79 aa8.61□□□□□ -1.03
CDC27-209ENST00000532893 MED9Q9NWA0 146 aa8.61□□□□□ -1.03
CDC27-209ENST00000532893 TRAV13-1A0A0B4J241 112 aa8.6□□□□□ -1.03
CDC27-209ENST00000532893 SMLR1H3BR10 107 aa8.6□□□□□ -1.03
CDC27-209ENST00000532893 SPAG11BQ08648 103 aa8.6□□□□□ -1.03
CDC27-209ENST00000532893 RNASE13Q5GAN3 156 aaKnown RBP8.6□□□□□ -1.03
CDC27-209ENST00000532893 FAM19A5Q7Z5A7 132 aaPredicted RBP8.6□□□□□ -1.03
CDC27-209ENST00000532893 RPP21Q9H633 154 aaKnown RBP8.6□□□□□ -1.03
CDC27-209ENST00000532893 C7orf77A4D0Y5 90 aa8.59□□□□□ -1.03
CDC27-209ENST00000532893 POLR2KP53803 58 aaKnown RBP8.58□□□□□ -1.04
CDC27-209ENST00000532893 IMMP2LQ96T52 175 aa8.58□□□□□ -1.04
CDC27-209ENST00000532893 PDE6DO43924 150 aa8.57□□□□□ -1.04
CDC27-209ENST00000532893 UBE2BP63146 152 aa8.57□□□□□ -1.04
CDC27-209ENST00000532893 FAM210AQ96ND0 272 aa8.57□□□□□ -1.04
CDC27-209ENST00000532893 CARHSP1Q9Y2V2 147 aaKnown RBP8.57□□□□□ -1.04
CDC27-209ENST00000532893 TRBV27A0A0K0K1C4 114 aa8.56□□□□□ -1.04
CDC27-209ENST00000532893 K7EN84 100 aa8.56□□□□□ -1.04
CDC27-209ENST00000532893 ZNF345Q14585 488 aa8.56□□□□□ -1.04
CDC27-209ENST00000532893 GAGE2EQ4V326 116 aa8.56□□□□□ -1.04
CDC27-209ENST00000532893 C10orf25Q5T742 122 aa8.56□□□□□ -1.04
CDC27-209ENST00000532893 KRTAP7-1Q8IUC3 87 aa8.56□□□□□ -1.04
CDC27-209ENST00000532893 OCC1Q8TAD7 63 aa8.56□□□□□ -1.04
CDC27-209ENST00000532893 MRPL35Q9NZE8 188 aaKnown RBP8.56□□□□□ -1.04
CDC27-209ENST00000532893 GAGE2DQ9UEU5 116 aa8.56□□□□□ -1.04
CDC27-209ENST00000532893 OR10D4PQ8NGN7 298 aa8.55□□□□□ -1.04
CDC27-209ENST00000532893 CSDC2Q9Y534 153 aaKnown RBP8.55□□□□□ -1.04
CDC27-209ENST00000532893 KANTRA0A1W2PQU2 76 aa8.54□□□□□ -1.04
CDC27-209ENST00000532893 M0QXV9 152 aa8.54□□□□□ -1.04
CDC27-209ENST00000532893 FCER1GP30273 86 aa8.54□□□□□ -1.04
CDC27-209ENST00000532893 UNQ6190/PRO20217Q6UXQ8 127 aa8.54□□□□□ -1.04
CDC27-209ENST00000532893 ORAOV1Q8WV07 137 aa8.54□□□□□ -1.04
CDC27-209ENST00000532893 UBE2D4Q9Y2X8 147 aa8.54□□□□□ -1.04
CDC27-209ENST00000532893 NDUFA1O15239 70 aa8.53□□□□□ -1.04
CDC27-209ENST00000532893 TLX1NBP0CAT3 122 aa8.53□□□□□ -1.04
CDC27-209ENST00000532893 TMEM241Q24JQ0 296 aa8.53□□□□□ -1.04
CDC27-209ENST00000532893 F8WDY8 70 aa8.52□□□□□ -1.05
CDC27-209ENST00000532893 TEX46H3BTG2 121 aa8.52□□□□□ -1.05
CDC27-209ENST00000532893 VCYO14598 125 aa8.52□□□□□ -1.05
CDC27-209ENST00000532893 GATCO43716 136 aaKnown RBP8.52□□□□□ -1.05
CDC27-209ENST00000532893 EIF4EBP3O60516 100 aaPredicted RBP8.52□□□□□ -1.05
CDC27-209ENST00000532893 SMAGPQ0VAQ4 97 aa8.52□□□□□ -1.05
CDC27-209ENST00000532893 Q6ZUT4 128 aa8.52□□□□□ -1.05
CDC27-209ENST00000532893 C6orf48Q9UBA6 75 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms