RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 MED13Q9UHV7 2174 aa10.88□□□□□ -0.67
LRRK1-207ENST00000531270 LOC107984640A0A0U1RRK4 108 aa10.88□□□□□ -0.67
LRRK1-207ENST00000531270 M0R378 163 aa10.88□□□□□ -0.67
LRRK1-207ENST00000531270 NANOS2P60321 138 aaKnown RBP10.88□□□□□ -0.67
LRRK1-207ENST00000531270 SPRY4Q9C004 299 aa10.88□□□□□ -0.67
LRRK1-207ENST00000531270 RBX1P62877 108 aa10.88□□□□□ -0.67
LRRK1-207ENST00000531270 CIRBP-AS1Q8TBR5 109 aa10.88□□□□□ -0.67
LRRK1-207ENST00000531270 TNRC6AQ8NDV7 1962 aaKnown RBP10.87□□□□□ -0.67
LRRK1-207ENST00000531270 DSCAML1Q8TD84 2053 aa10.87□□□□□ -0.67
LRRK1-207ENST00000531270 IGLV4-69A0A075B6H9 119 aa10.87□□□□□ -0.67
LRRK1-207ENST00000531270 MAPKAPK5-AS1Q8N8E1 139 aa10.87□□□□□ -0.67
LRRK1-207ENST00000531270 TRBV6-4A0A1B0GX49 114 aa10.86□□□□□ -0.67
LRRK1-207ENST00000531270 PRM2P04554 102 aa10.86□□□□□ -0.67
LRRK1-207ENST00000531270 MRPS12O15235 138 aaKnown RBP10.86□□□□□ -0.67
LRRK1-207ENST00000531270 PLXNA4Q9HCM2 1894 aa10.86□□□□□ -0.67
LRRK1-207ENST00000531270 GPR179Q6PRD1 2367 aa10.86□□□□□ -0.67
LRRK1-207ENST00000531270 M0QY20 66 aa10.86□□□□□ -0.67
LRRK1-207ENST00000531270 TIMM17BO60830 172 aa10.85□□□□□ -0.67
LRRK1-207ENST00000531270 CELA1Q9UNI1 258 aa10.85□□□□□ -0.67
LRRK1-207ENST00000531270 C18orf65Q6ZTR6 163 aa10.85□□□□□ -0.67
LRRK1-207ENST00000531270 CACNA1HO95180 2353 aa10.85□□□□□ -0.67
LRRK1-207ENST00000531270 ESRGQ1W209 222 aa10.85□□□□□ -0.67
LRRK1-207ENST00000531270 PRORYQ9H606 182 aa10.85□□□□□ -0.67
LRRK1-207ENST00000531270 A0A1B0GXF2 115 aa10.84□□□□□ -0.67
LRRK1-207ENST00000531270 PRYO14603 147 aa10.84□□□□□ -0.67
LRRK1-207ENST00000531270 SPINK1P00995 79 aa10.84□□□□□ -0.67
LRRK1-207ENST00000531270 CD164L2Q6UWJ8 174 aa10.84□□□□□ -0.67
LRRK1-207ENST00000531270 PCNX1Q96RV3 2341 aa10.84□□□□□ -0.67
LRRK1-207ENST00000531270 IGLV2-8P01709 118 aa10.83□□□□□ -0.68
LRRK1-207ENST00000531270 C10orf25Q5T742 122 aa10.83□□□□□ -0.68
LRRK1-207ENST00000531270 NUPR2A6NF83 97 aa10.82□□□□□ -0.68
LRRK1-207ENST00000531270 SIP14410 1827 aa10.82□□□□□ -0.68
LRRK1-207ENST00000531270 FBXL19-AS1Q494R0 122 aa10.82□□□□□ -0.68
LRRK1-207ENST00000531270 LINC00959A0A1B0GUT2 108 aa10.81□□□□□ -0.68
LRRK1-207ENST00000531270 SMIM11BQ8TCY0 68 aa10.81□□□□□ -0.68
LRRK1-207ENST00000531270 Q6ZSR3 168 aa10.81□□□□□ -0.68
LRRK1-207ENST00000531270 TRBV30A0A0K0K1B3 111 aa10.81□□□□□ -0.68
LRRK1-207ENST00000531270 MED13LQ71F56 2210 aa10.8□□□□□ -0.68
LRRK1-207ENST00000531270 LELP1Q5T871 98 aa10.8□□□□□ -0.68
LRRK1-207ENST00000531270 ZNF73O43830 326 aaPredicted RBP10.8□□□□□ -0.68
LRRK1-207ENST00000531270 IGHV6-1A0A0B4J1U7 121 aa10.8□□□□□ -0.68
LRRK1-207ENST00000531270 SHANK1Q9Y566 2161 aa10.8□□□□□ -0.68
LRRK1-207ENST00000531270 CREBBPQ92793 2442 aa10.79□□□□□ -0.68
LRRK1-207ENST00000531270 OXLD1Q5BKU9 147 aa10.79□□□□□ -0.68
LRRK1-207ENST00000531270 C1orf229Q6ZS94 237 aaPredicted RBP10.79□□□□□ -0.68
LRRK1-207ENST00000531270 ZSWIM8A7E2V4 1837 aa10.79□□□□□ -0.68
LRRK1-207ENST00000531270 M0QXV9 152 aa10.78□□□□□ -0.68
LRRK1-207ENST00000531270 ATP5EP56381 51 aaPredicted RBP10.78□□□□□ -0.68
LRRK1-207ENST00000531270 Q6Q795 121 aa10.78□□□□□ -0.68
LRRK1-207ENST00000531270 ATRXP46100 2492 aa10.78□□□□□ -0.68
LRRK1-207ENST00000531270 LINC00474Q9P2X8 69 aa10.78□□□□□ -0.68
LRRK1-207ENST00000531270 NDUFC1O43677 76 aa10.78□□□□□ -0.68
LRRK1-207ENST00000531270 MGAMO43451 1857 aa10.78□□□□□ -0.68
LRRK1-207ENST00000531270 MBD6Q96DN6 1003 aa10.77□□□□□ -0.68
LRRK1-207ENST00000531270 TSHBP01222 138 aa10.77□□□□□ -0.69
LRRK1-207ENST00000531270 CRIP1P50238 77 aa10.77□□□□□ -0.69
LRRK1-207ENST00000531270 ZNF843Q8N446 348 aa10.77□□□□□ -0.69
LRRK1-207ENST00000531270 RNF185Q96GF1 192 aa10.77□□□□□ -0.69
LRRK1-207ENST00000531270 ZNF702PQ9H963 129 aa10.77□□□□□ -0.69
LRRK1-207ENST00000531270 C1orf195Q5TG92 126 aa10.77□□□□□ -0.69
LRRK1-207ENST00000531270 PLXNA2O75051 1894 aa10.76□□□□□ -0.69
LRRK1-207ENST00000531270 IGLV2-11P01706 119 aa10.76□□□□□ -0.69
LRRK1-207ENST00000531270 LINC01006Q8NI28 216 aa10.76□□□□□ -0.69
LRRK1-207ENST00000531270 TRBV7-6A0A0J9YX20 115 aa10.76□□□□□ -0.69
LRRK1-207ENST00000531270 IGLV5-52A0A0A0MRZ9 124 aa10.75□□□□□ -0.69
LRRK1-207ENST00000531270 NDUFA7O95182 113 aa10.75□□□□□ -0.69
LRRK1-207ENST00000531270 RPL28P46779 137 aaKnown RBP10.75□□□□□ -0.69
LRRK1-207ENST00000531270 LINC00208Q96KT6 92 aa10.75□□□□□ -0.69
LRRK1-207ENST00000531270 PCOTHQ58A44 107 aa10.74□□□□□ -0.69
LRRK1-207ENST00000531270 CYSRT1A8MQ03 144 aa10.74□□□□□ -0.69
LRRK1-207ENST00000531270 EBI3Q14213 229 aa10.74□□□□□ -0.69
LRRK1-207ENST00000531270 SOSTDC1Q6X4U4 206 aa10.74□□□□□ -0.69
LRRK1-207ENST00000531270 LST1O00453 97 aa10.73□□□□□ -0.69
LRRK1-207ENST00000531270 CCDC179H3BU77 68 aa10.72□□□□□ -0.69
LRRK1-207ENST00000531270 C6orf223Q8N319 242 aa10.72□□□□□ -0.69
LRRK1-207ENST00000531270 BRWD1-AS2P59051 145 aa10.72□□□□□ -0.69
LRRK1-207ENST00000531270 NLRC5Q86WI3 1866 aa10.72□□□□□ -0.69
LRRK1-207ENST00000531270 C9orf116Q5BN46 136 aaPredicted RBP10.72□□□□□ -0.69
LRRK1-207ENST00000531270 C11orf1Q9H5F2 150 aa10.71□□□□□ -0.69
LRRK1-207ENST00000531270 PRR9Q5T870 116 aa10.71□□□□□ -0.69
LRRK1-207ENST00000531270 LINC01556Q5JQF7 62 aa10.71□□□□□ -0.69
LRRK1-207ENST00000531270 SMR3AQ99954 134 aa10.71□□□□□ -0.69
LRRK1-207ENST00000531270 Q6ZS46 218 aa10.71□□□□□ -0.7
LRRK1-207ENST00000531270 PSMG3-AS1Q96PY0 264 aa10.71□□□□□ -0.7
LRRK1-207ENST00000531270 REG3GQ6UW15 175 aa10.71□□□□□ -0.7
LRRK1-207ENST00000531270 PYGO1Q9Y3Y4 419 aa10.7□□□□□ -0.7
LRRK1-207ENST00000531270 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.7□□□□□ -0.7
LRRK1-207ENST00000531270 BRI3O95415 125 aa10.7□□□□□ -0.7
LRRK1-207ENST00000531270 P0C879 139 aa10.7□□□□□ -0.7
LRRK1-207ENST00000531270 RNASE3P12724 160 aaKnown RBP10.7□□□□□ -0.7
LRRK1-207ENST00000531270 C1orf137Q5JT78 98 aa10.7□□□□□ -0.7
LRRK1-207ENST00000531270 UNQ6190/PRO20217Q6UXQ8 127 aa10.7□□□□□ -0.7
LRRK1-207ENST00000531270 MRGPRG-AS1Q2M3A8 158 aa10.69□□□□□ -0.7
LRRK1-207ENST00000531270 ARHGAP21Q5T5U3 1957 aa10.69□□□□□ -0.7
LRRK1-207ENST00000531270 FSHBP01225 129 aa10.69□□□□□ -0.7
LRRK1-207ENST00000531270 DEFB116Q30KQ4 102 aa10.69□□□□□ -0.7
LRRK1-207ENST00000531270 BEAN1Q3B7T3 259 aa10.69□□□□□ -0.7
LRRK1-207ENST00000531270 HIVEP2P31629 2446 aa10.68□□□□□ -0.7
LRRK1-207ENST00000531270 COX17Q14061 63 aa10.68□□□□□ -0.7
LRRK1-207ENST00000531270 LINC01547P58512 204 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms