RNA–Protein interactions for RNA: ENST00000531226.5

PACSIN3-208, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-208ENST00000531226 IGKV3OR2-268A0A0C4DH90 116 aa12.49□□□□□ -0.41
PACSIN3-208ENST00000531226 PRSS47A8MTI9 375 aa12.49□□□□□ -0.41
PACSIN3-208ENST00000531226 GCSHP23434 173 aa12.49□□□□□ -0.41
PACSIN3-208ENST00000531226 C14orf177Q52M58 125 aa12.49□□□□□ -0.41
PACSIN3-208ENST00000531226 LRP1BQ9NZR2 4599 aa12.49□□□□□ -0.41
PACSIN3-208ENST00000531226 USP17L23D6RBM5 183 aa12.48□□□□□ -0.41
PACSIN3-208ENST00000531226 KRTAP10-1P60331 282 aa12.48□□□□□ -0.41
PACSIN3-208ENST00000531226 SMAGPQ0VAQ4 97 aa12.48□□□□□ -0.41
PACSIN3-208ENST00000531226 TMEM18Q96B42 140 aa12.48□□□□□ -0.41
PACSIN3-208ENST00000531226 MAP1LC3AQ9H492 121 aa12.48□□□□□ -0.41
PACSIN3-208ENST00000531226 UBE2D4Q9Y2X8 147 aa12.48□□□□□ -0.41
PACSIN3-208ENST00000531226 CSDC2Q9Y534 153 aaKnown RBP12.48□□□□□ -0.41
PACSIN3-208ENST00000531226 SNAPINO95295 136 aa12.47□□□□□ -0.41
PACSIN3-208ENST00000531226 SVBPQ8N300 66 aa12.47□□□□□ -0.41
PACSIN3-208ENST00000531226 CDC42SE2Q9NRR3 84 aa12.47□□□□□ -0.41
PACSIN3-208ENST00000531226 DGAT2L7PQ6IED9 249 aa12.46□□□□□ -0.41
PACSIN3-208ENST00000531226 TIMM21Q9BVV7 248 aa12.46□□□□□ -0.41
PACSIN3-208ENST00000531226 COX19Q49B96 90 aa12.45□□□□□ -0.42
PACSIN3-208ENST00000531226 ZNF664Q8N3J9 261 aa12.45□□□□□ -0.42
PACSIN3-208ENST00000531226 GNB1LQ9BYB4 327 aa12.45□□□□□ -0.42
PACSIN3-208ENST00000531226 KRTAP17-1Q9BYP8 105 aa12.45□□□□□ -0.42
PACSIN3-208ENST00000531226 LOC389332A0A1B0GUA5 103 aa12.44□□□□□ -0.42
PACSIN3-208ENST00000531226 RAB5AP20339 215 aa12.44□□□□□ -0.42
PACSIN3-208ENST00000531226 CHCHD10Q8WYQ3 142 aaPredicted RBP12.44□□□□□ -0.42
PACSIN3-208ENST00000531226 LINC00959A0A1B0GUT2 108 aa12.43□□□□□ -0.42
PACSIN3-208ENST00000531226 GAGE12HA6NDE8 117 aa12.43□□□□□ -0.42
PACSIN3-208ENST00000531226 RPL39P62891 51 aaKnown RBP12.43□□□□□ -0.42
PACSIN3-208ENST00000531226 KIAA1644Q3SXP7 199 aa12.43□□□□□ -0.42
PACSIN3-208ENST00000531226 Q8N8P6 123 aa12.43□□□□□ -0.42
PACSIN3-208ENST00000531226 MT-ND6P03923 174 aa12.41□□□□□ -0.42
PACSIN3-208ENST00000531226 PRSS1P07477 247 aa12.41□□□□□ -0.42
PACSIN3-208ENST00000531226 Q6ZUT4 128 aa12.41□□□□□ -0.42
PACSIN3-208ENST00000531226 SPANXA1Q9NS26 97 aa12.41□□□□□ -0.42
PACSIN3-208ENST00000531226 SS18Q15532 418 aa12.4□□□□□ -0.42
PACSIN3-208ENST00000531226 RNASE13Q5GAN3 156 aaKnown RBP12.4□□□□□ -0.42
PACSIN3-208ENST00000531226 K7EMI3 77 aa12.39□□□□□ -0.43
PACSIN3-208ENST00000531226 CCL25O15444 150 aa12.39□□□□□ -0.43
PACSIN3-208ENST00000531226 NXT2Q9NPJ8 142 aaKnown RBP12.39□□□□□ -0.43
PACSIN3-208ENST00000531226 RYR1P21817 5038 aa12.39□□□□□ -0.43
PACSIN3-208ENST00000531226 TGIF2-C20orf24A0A0A6YYL0 155 aa12.38□□□□□ -0.43
PACSIN3-208ENST00000531226 XCL1P47992 114 aa12.38□□□□□ -0.43
PACSIN3-208ENST00000531226 MRPS36P82909 103 aaKnown RBP12.38□□□□□ -0.43
PACSIN3-208ENST00000531226 FOXI1Q12951 378 aa12.38□□□□□ -0.43
PACSIN3-208ENST00000531226 FAM104AQ969W3 186 aa12.38□□□□□ -0.43
PACSIN3-208ENST00000531226 MRPL18Q9H0U6 180 aaKnown RBP12.38□□□□□ -0.43
PACSIN3-208ENST00000531226 APOBP04114 4563 aaKnown RBP12.38□□□□□ -0.43
PACSIN3-208ENST00000531226 IFI27P40305 119 aaPredicted RBP12.37□□□□□ -0.43
PACSIN3-208ENST00000531226 XGP55808 180 aa12.37□□□□□ -0.43
PACSIN3-208ENST00000531226 ORMDL2Q53FV1 153 aa12.37□□□□□ -0.43
PACSIN3-208ENST00000531226 SLC7A5P1Q8MH63 180 aa12.37□□□□□ -0.43
PACSIN3-208ENST00000531226 C15orf56Q8N910 161 aa12.37□□□□□ -0.43
PACSIN3-208ENST00000531226 hDV102S1A0JD36 115 aa12.36□□□□□ -0.43
PACSIN3-208ENST00000531226 LINC01620Q4KN68 170 aa12.36□□□□□ -0.43
PACSIN3-208ENST00000531226 CFAP161Q6P656 301 aa12.36□□□□□ -0.43
PACSIN3-208ENST00000531226 ALKBH7Q9BT30 221 aaPredicted RBP12.36□□□□□ -0.43
PACSIN3-208ENST00000531226 PYGO1Q9Y3Y4 419 aa12.36□□□□□ -0.43
PACSIN3-208ENST00000531226 C1orf196B1AJZ1 125 aa12.35□□□□□ -0.43
PACSIN3-208ENST00000531226 FABP9Q0Z7S8 132 aa12.35□□□□□ -0.43
PACSIN3-208ENST00000531226 CD164L2Q6UWJ8 174 aa12.35□□□□□ -0.43
PACSIN3-208ENST00000531226 OPRPNQ99935 248 aaPredicted RBP12.35□□□□□ -0.43
PACSIN3-208ENST00000531226 CYSLTR1Q9Y271 337 aa12.35□□□□□ -0.43
PACSIN3-208ENST00000531226 HSPG2P98160 4391 aa12.35□□□□□ -0.43
PACSIN3-208ENST00000531226 TRAV13-1A0A0B4J241 112 aa12.34□□□□□ -0.43
PACSIN3-208ENST00000531226 C2orf66Q6UXQ4 117 aa12.34□□□□□ -0.43
PACSIN3-208ENST00000531226 Q6ZSA8 131 aa12.34□□□□□ -0.43
PACSIN3-208ENST00000531226 AP5S1Q9NUS5 200 aa12.34□□□□□ -0.43
PACSIN3-208ENST00000531226 FAM30AQ9NZY2 134 aa12.34□□□□□ -0.43
PACSIN3-208ENST00000531226 CNBPP62633 177 aaKnown RBP12.33□□□□□ -0.44
PACSIN3-208ENST00000531226 TRAPPC1Q9Y5R8 145 aa12.33□□□□□ -0.44
PACSIN3-208ENST00000531226 C9orf163Q8N9P6 203 aa12.32□□□□□ -0.44
PACSIN3-208ENST00000531226 PRSS3P2Q8NHM4 247 aa12.32□□□□□ -0.44
PACSIN3-208ENST00000531226 YPEL4Q96NS1 127 aa12.32□□□□□ -0.44
PACSIN3-208ENST00000531226 PCLOQ9Y6V0 5065 aa12.31□□□□□ -0.44
PACSIN3-208ENST00000531226 IGLV4-3A0A075B6K6 122 aa12.31□□□□□ -0.44
PACSIN3-208ENST00000531226 GVQW2A0A096LPI5 108 aaPredicted RBP12.31□□□□□ -0.44
PACSIN3-208ENST00000531226 HIGD2BQ4VC39 106 aa12.31□□□□□ -0.44
PACSIN3-208ENST00000531226 TMEM141Q96I45 108 aa12.31□□□□□ -0.44
PACSIN3-208ENST00000531226 IGHV1-58A0A0C4DH39 117 aa12.3□□□□□ -0.44
PACSIN3-208ENST00000531226 IFITM10A6NMD0 228 aa12.3□□□□□ -0.44
PACSIN3-208ENST00000531226 G0S2P27469 103 aa12.3□□□□□ -0.44
PACSIN3-208ENST00000531226 LINC01546A6NGU7 62 aa12.29□□□□□ -0.44
PACSIN3-208ENST00000531226 SLPIP03973 132 aa12.29□□□□□ -0.44
PACSIN3-208ENST00000531226 HAMPP81172 84 aa12.29□□□□□ -0.44
PACSIN3-208ENST00000531226 Q8N1X5 172 aa12.29□□□□□ -0.44
PACSIN3-208ENST00000531226 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.28□□□□□ -0.44
PACSIN3-208ENST00000531226 COX7A2LO14548 114 aa12.28□□□□□ -0.44
PACSIN3-208ENST00000531226 NPSP0C0P6 89 aa12.28□□□□□ -0.44
PACSIN3-208ENST00000531226 SMCO4Q9NRQ5 59 aa12.28□□□□□ -0.44
PACSIN3-208ENST00000531226 IGIPA6NJ69 53 aa12.27□□□□□ -0.45
PACSIN3-208ENST00000531226 TEX43Q6ZNM6 134 aa12.27□□□□□ -0.45
PACSIN3-208ENST00000531226 CBLN2Q8IUK8 224 aa12.27□□□□□ -0.45
PACSIN3-208ENST00000531226 TOMM6Q96B49 74 aa12.27□□□□□ -0.45
PACSIN3-208ENST00000531226 MALP21145 153 aa12.26□□□□□ -0.45
PACSIN3-208ENST00000531226 Q6ZN92 141 aa12.26□□□□□ -0.45
PACSIN3-208ENST00000531226 FA2HQ7L5A8 372 aa12.26□□□□□ -0.45
PACSIN3-208ENST00000531226 LINC00173Q6ZV60 143 aa12.25□□□□□ -0.45
PACSIN3-208ENST00000531226 C5orf38Q86SI9 138 aa12.25□□□□□ -0.45
PACSIN3-208ENST00000531226 C18orf32Q8TCD1 76 aa12.25□□□□□ -0.45
PACSIN3-208ENST00000531226 AMELXQ99217 191 aa12.25□□□□□ -0.45
PACSIN3-208ENST00000531226 TIMM17AQ99595 171 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms