RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 ZNF561-AS1K7EIQ3 104 aa8.1□□□□□ -1.11
HIF3A-214ENST00000531043 EIF5AP63241 154 aaKnown RBP8.1□□□□□ -1.11
HIF3A-214ENST00000531043 RGS21Q2M5E4 152 aa8.1□□□□□ -1.11
HIF3A-214ENST00000531043 C9orf116Q5BN46 136 aaPredicted RBP8.1□□□□□ -1.11
HIF3A-214ENST00000531043 PHF5AQ7RTV0 110 aaKnown RBP8.1□□□□□ -1.11
HIF3A-214ENST00000531043 PRR26Q8N8Z3 221 aa8.1□□□□□ -1.11
HIF3A-214ENST00000531043 TMEM101Q96IK0 257 aa8.1□□□□□ -1.11
HIF3A-214ENST00000531043 BTF3L4Q96K17 158 aa8.1□□□□□ -1.11
HIF3A-214ENST00000531043 TRBV6-5A0A0K0K1A5 114 aa8.09□□□□□ -1.11
HIF3A-214ENST00000531043 LOC107984640A0A0U1RRK4 108 aa8.09□□□□□ -1.11
HIF3A-214ENST00000531043 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.09□□□□□ -1.11
HIF3A-214ENST00000531043 SS18Q15532 418 aa8.09□□□□□ -1.11
HIF3A-214ENST00000531043 RNASE13Q5GAN3 156 aaKnown RBP8.09□□□□□ -1.11
HIF3A-214ENST00000531043 KRTAP11-1Q8IUC1 163 aa8.09□□□□□ -1.11
HIF3A-214ENST00000531043 NUP35Q8NFH5 326 aa8.09□□□□□ -1.11
HIF3A-214ENST00000531043 BATF3Q9NR55 127 aa8.09□□□□□ -1.11
HIF3A-214ENST00000531043 MT-ND6P03923 174 aa8.08□□□□□ -1.12
HIF3A-214ENST00000531043 C1orf137Q5JT78 98 aa8.08□□□□□ -1.12
HIF3A-214ENST00000531043 MRPL52Q86TS9 123 aaKnown RBP8.08□□□□□ -1.12
HIF3A-214ENST00000531043 ZNF664Q8N3J9 261 aa8.08□□□□□ -1.12
HIF3A-214ENST00000531043 MRAP2Q96G30 205 aa8.08□□□□□ -1.12
HIF3A-214ENST00000531043 OPRPNQ99935 248 aaPredicted RBP8.08□□□□□ -1.12
HIF3A-214ENST00000531043 PKIGQ9Y2B9 76 aa8.08□□□□□ -1.12
HIF3A-214ENST00000531043 POLR2KP53803 58 aaKnown RBP8.07□□□□□ -1.12
HIF3A-214ENST00000531043 TEX261Q6UWH6 196 aa8.07□□□□□ -1.12
HIF3A-214ENST00000531043 SMIM15Q7Z3B0 74 aa8.07□□□□□ -1.12
HIF3A-214ENST00000531043 APOMO95445 188 aa8.06□□□□□ -1.12
HIF3A-214ENST00000531043 EIF5AL1Q6IS14 154 aaKnown RBP8.06□□□□□ -1.12
HIF3A-214ENST00000531043 C5orf38Q86SI9 138 aa8.06□□□□□ -1.12
HIF3A-214ENST00000531043 CAMK2N2Q96S95 79 aa8.06□□□□□ -1.12
HIF3A-214ENST00000531043 ST20Q9HBF5 79 aa8.06□□□□□ -1.12
HIF3A-214ENST00000531043 MUC2Q02817 5179 aa8.06□□□□□ -1.12
HIF3A-214ENST00000531043 SMKR1H3BMG3 65 aa8.05□□□□□ -1.12
HIF3A-214ENST00000531043 TEX46H3BTG2 121 aa8.05□□□□□ -1.12
HIF3A-214ENST00000531043 COX7A2LO14548 114 aa8.05□□□□□ -1.12
HIF3A-214ENST00000531043 GATCO43716 136 aaKnown RBP8.05□□□□□ -1.12
HIF3A-214ENST00000531043 RPL18AQ02543 176 aaKnown RBP8.05□□□□□ -1.12
HIF3A-214ENST00000531043 ISOC2Q96AB3 205 aa8.05□□□□□ -1.12
HIF3A-214ENST00000531043 TRAV13-1A0A0B4J241 112 aa8.04□□□□□ -1.12
HIF3A-214ENST00000531043 FAM168BA1KXE4 195 aa8.04□□□□□ -1.12
HIF3A-214ENST00000531043 C7orf77A4D0Y5 90 aa8.04□□□□□ -1.12
HIF3A-214ENST00000531043 MALP21145 153 aa8.04□□□□□ -1.12
HIF3A-214ENST00000531043 TRBV27A0A0K0K1C4 114 aa8.03□□□□□ -1.12
HIF3A-214ENST00000531043 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
HIF3A-214ENST00000531043 RAB4AP20338 218 aa8.03□□□□□ -1.12
HIF3A-214ENST00000531043 Q6ZUT4 128 aa8.03□□□□□ -1.12
HIF3A-214ENST00000531043 AMN1Q8IY45 258 aa8.03□□□□□ -1.12
HIF3A-214ENST00000531043 A8MWL6 223 aa8.02□□□□□ -1.13
HIF3A-214ENST00000531043 C1orf196B1AJZ1 125 aa8.02□□□□□ -1.13
HIF3A-214ENST00000531043 C2orf48Q96LS8 159 aa8.02□□□□□ -1.13
HIF3A-214ENST00000531043 UBE2D4Q9Y2X8 147 aa8.02□□□□□ -1.13
HIF3A-214ENST00000531043 KRTAP1-4P0C5Y4 121 aa8.01□□□□□ -1.13
HIF3A-214ENST00000531043 SPAG11BQ08648 103 aa8.01□□□□□ -1.13
HIF3A-214ENST00000531043 C10orf25Q5T742 122 aa8.01□□□□□ -1.13
HIF3A-214ENST00000531043 FAM231DQ6ZW35 169 aa8.01□□□□□ -1.13
HIF3A-214ENST00000531043 KRTAP7-1Q8IUC3 87 aa8.01□□□□□ -1.13
HIF3A-214ENST00000531043 DIRC1Q969H9 104 aa8.01□□□□□ -1.13
HIF3A-214ENST00000531043 TMEM191AQ9H0A3 160 aa8.01□□□□□ -1.13
HIF3A-214ENST00000531043 A0A087WZ39 114 aa8□□□□□ -1.13
HIF3A-214ENST00000531043 HIGD1CA8MV81 97 aa8□□□□□ -1.13
HIF3A-214ENST00000531043 H0Y9J4 135 aa8□□□□□ -1.13
HIF3A-214ENST00000531043 NRACQ8N912 160 aa8□□□□□ -1.13
HIF3A-214ENST00000531043 FAM104AQ969W3 186 aa8□□□□□ -1.13
HIF3A-214ENST00000531043 A0A1B0GUT8 65 aa7.99□□□□□ -1.13
HIF3A-214ENST00000531043 CSDC2Q9Y534 153 aaKnown RBP7.99□□□□□ -1.13
HIF3A-214ENST00000531043 VCYO14598 125 aa7.98□□□□□ -1.13
HIF3A-214ENST00000531043 FCER1GP30273 86 aa7.98□□□□□ -1.13
HIF3A-214ENST00000531043 TAGLN2P37802 199 aaKnown RBP7.98□□□□□ -1.13
HIF3A-214ENST00000531043 CEBPGP53567 150 aa7.98□□□□□ -1.13
HIF3A-214ENST00000531043 RNF151Q2KHN1 245 aa7.98□□□□□ -1.13
HIF3A-214ENST00000531043 CT83Q5H943 113 aa7.98□□□□□ -1.13
HIF3A-214ENST00000531043 PRR4Q16378 134 aa7.97□□□□□ -1.13
HIF3A-214ENST00000531043 UNQ6190/PRO20217Q6UXQ8 127 aa7.97□□□□□ -1.13
HIF3A-214ENST00000531043 FAM19A5Q7Z5A7 132 aaPredicted RBP7.97□□□□□ -1.13
HIF3A-214ENST00000531043 TSKUQ8WUA8 353 aa7.97□□□□□ -1.13
HIF3A-214ENST00000531043 ORAOV1Q8WV07 137 aa7.97□□□□□ -1.13
HIF3A-214ENST00000531043 BORCS7Q96B45 105 aa7.97□□□□□ -1.13
HIF3A-214ENST00000531043 FAM210AQ96ND0 272 aa7.97□□□□□ -1.13
HIF3A-214ENST00000531043 KRTAP9-2Q9BYQ4 174 aa7.97□□□□□ -1.13
HIF3A-214ENST00000531043 TMEM250H0YL14 139 aa7.96□□□□□ -1.14
HIF3A-214ENST00000531043 SUMO2P61956 95 aaKnown RBP7.96□□□□□ -1.14
HIF3A-214ENST00000531043 RPL39P62891 51 aaKnown RBP7.96□□□□□ -1.14
HIF3A-214ENST00000531043 SLC51BQ86UW2 128 aa7.96□□□□□ -1.14
HIF3A-214ENST00000531043 MRPL35Q9NZE8 188 aaKnown RBP7.96□□□□□ -1.14
HIF3A-214ENST00000531043 C6orf48Q9UBA6 75 aa7.96□□□□□ -1.14
HIF3A-214ENST00000531043 IGLV1-50A0A075B6I6 118 aa7.95□□□□□ -1.14
HIF3A-214ENST00000531043 IGHV3OR16-9A0A0B4J2B5 98 aa7.95□□□□□ -1.14
HIF3A-214ENST00000531043 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
HIF3A-214ENST00000531043 LINC01551Q86U37 167 aa7.95□□□□□ -1.14
HIF3A-214ENST00000531043 TIMM21Q9BVV7 248 aa7.95□□□□□ -1.14
HIF3A-214ENST00000531043 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
HIF3A-214ENST00000531043 OR10D4PQ8NGN7 298 aa7.94□□□□□ -1.14
HIF3A-214ENST00000531043 TLX1NBP0CAT3 122 aa7.93□□□□□ -1.14
HIF3A-214ENST00000531043 MRPL51Q4U2R6 128 aaKnown RBP7.93□□□□□ -1.14
HIF3A-214ENST00000531043 IMMP2LQ96T52 175 aa7.93□□□□□ -1.14
HIF3A-214ENST00000531043 KIR2DL4Q99706 377 aa7.93□□□□□ -1.14
HIF3A-214ENST00000531043 OSTCQ9NRP0 149 aa7.93□□□□□ -1.14
HIF3A-214ENST00000531043 V9GYV3 84 aa7.93□□□□□ -1.14
HIF3A-214ENST00000531043 FAT4Q6V0I7 4981 aa7.92□□□□□ -1.14
HIF3A-214ENST00000531043 NDUFA1O15239 70 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms