RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 M0R381 172 aa2.82□□□□□ -1.96
PTPRC-214ENST00000530727 ZNF705DP0CH99 300 aaPredicted RBP2.82□□□□□ -1.96
PTPRC-214ENST00000530727 ZNF705BP0CI00 300 aaPredicted RBP2.82□□□□□ -1.96
PTPRC-214ENST00000530727 PRR9Q5T870 116 aa2.82□□□□□ -1.96
PTPRC-214ENST00000530727 SH2D6Q7Z4S9 175 aa2.82□□□□□ -1.96
PTPRC-214ENST00000530727 POM121L12Q8N7R1 296 aa2.82□□□□□ -1.96
PTPRC-214ENST00000530727 NUP35Q8NFH5 326 aa2.82□□□□□ -1.96
PTPRC-214ENST00000530727 OR4B1Q8NGF8 309 aa2.82□□□□□ -1.96
PTPRC-214ENST00000530727 TSKUQ8WUA8 353 aa2.82□□□□□ -1.96
PTPRC-214ENST00000530727 DNAJC30Q96LL9 226 aa2.82□□□□□ -1.96
PTPRC-214ENST00000530727 CAMK2N2Q96S95 79 aa2.82□□□□□ -1.96
PTPRC-214ENST00000530727 RPP21Q9H633 154 aaKnown RBP2.82□□□□□ -1.96
PTPRC-214ENST00000530727 MUC4Q99102 2169 aa2.82□□□□□ -1.96
PTPRC-214ENST00000530727 IGKV3-7A0A075B6H7 116 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 SH2D1AO60880 128 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 IGLV1-51P01701 117 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 S100PP25815 95 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 LINC00313P59037 77 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 DEFA6Q01524 100 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 Q1RN00 199 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 AMTNQ6UX39 209 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 Q6ZQT7 251 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 TMEM158Q8WZ71 300 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 ODF3Q96PU9 254 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 C8orf17Q9NRJ1 99 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 NBEAL2Q6ZNJ1 2754 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 FABP5P3A8MUU1 101 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 HIGD1CA8MV81 97 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 A8MWL6 223 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 ZNF324O75467 553 aaPredicted RBP2.81□□□□□ -1.96
PTPRC-214ENST00000530727 TRGC2P03986 189 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 ZNF688P0C7X2 276 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 IGLC6P0CF74 106 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 GZMBP10144 247 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 RPS10P46783 165 aaKnown RBP2.81□□□□□ -1.96
PTPRC-214ENST00000530727 SNRPD3P62318 126 aaKnown RBP2.81□□□□□ -1.96
PTPRC-214ENST00000530727 HIST1H1AQ02539 215 aaPredicted RBP2.81□□□□□ -1.96
PTPRC-214ENST00000530727 C12orf74Q32Q52 190 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 PSMG4Q5JS54 123 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 Q6AWC8 147 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 SLC25A29Q8N8R3 303 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 CNFNQ9BYD5 112 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 NAT8BQ9UHF3 227 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 NBEAL1Q6ZS30 2694 aa2.81□□□□□ -1.96
PTPRC-214ENST00000530727 H3BMM0 161 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HIST1H2BKO60814 126 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 INSP01308 110 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HIST1H2BJP06899 126 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 GIG44P09565 113 aaPredicted RBP2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HLA-DRB4P13762 266 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HIST1H2BOP23527 126 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HIST1H2BBP33778 126 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HIST1H2BDP58876 126 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HIST1H2BCP62807 126 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 FABP9Q0Z7S8 132 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HIST2H2BEQ16778 126 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.8□□□□□ -1.96
PTPRC-214ENST00000530727 RASL11AQ6T310 242 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 FOXI2Q6ZQN5 318 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 TMEM136Q6ZRR5 245 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 C14orf178Q8N769 122 aaPredicted RBP2.8□□□□□ -1.96
PTPRC-214ENST00000530727 WFDC9Q8NEX5 89 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 FRZBQ92765 325 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HIST1H2BHQ93079 126 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 C16orf74Q96GX8 76 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HIST1H2BNQ99877 126 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HIST1H2BMQ99879 126 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 NDFIP1Q9BT67 221 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HLA-DRB4X5D2U9 266 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 TMEM189A5PLL7 270 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 TRGC1P0CF51 173 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 UBE2AP49459 152 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 CMC4P56277 68 aaPredicted RBP2.8□□□□□ -1.96
PTPRC-214ENST00000530727 DEFB131AP59861 70 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 TDRG1Q3Y452 100 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 HIGD2BQ4VC39 106 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 DNLZQ5SXM8 178 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 DYNLRB2Q8TF09 96 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 TP53TG3Q9ULZ0 132 aa2.8□□□□□ -1.96
PTPRC-214ENST00000530727 TRAV21A0A0B4J279 112 aa2.79□□□□□ -1.96
PTPRC-214ENST00000530727 C1orf196B1AJZ1 125 aa2.79□□□□□ -1.96
PTPRC-214ENST00000530727 LINC00587B1AMM8 73 aa2.79□□□□□ -1.96
PTPRC-214ENST00000530727 SPINK4O60575 86 aa2.79□□□□□ -1.96
PTPRC-214ENST00000530727 ARMS2P0C7Q2 107 aa2.79□□□□□ -1.96
PTPRC-214ENST00000530727 LYZL1Q6UWQ5 148 aa2.79□□□□□ -1.96
PTPRC-214ENST00000530727 SPANXA1Q9NS26 97 aa2.79□□□□□ -1.96
PTPRC-214ENST00000530727 IGLV1-50A0A075B6I6 118 aa2.78□□□□□ -1.96
PTPRC-214ENST00000530727 TMSB15BA0A087X1C1 80 aa2.78□□□□□ -1.96
PTPRC-214ENST00000530727 A0A1B0GUT8 65 aa2.78□□□□□ -1.96
PTPRC-214ENST00000530727 C7orf71A4D174 169 aa2.78□□□□□ -1.96
PTPRC-214ENST00000530727 M0R2Z0 102 aa2.78□□□□□ -1.96
PTPRC-214ENST00000530727 APOMO95445 188 aa2.78□□□□□ -1.96
PTPRC-214ENST00000530727 MT-ND6P03923 174 aa2.78□□□□□ -1.96
PTPRC-214ENST00000530727 GPX1P07203 203 aa2.78□□□□□ -1.96
PTPRC-214ENST00000530727 RNASE4P34096 147 aaKnown RBP2.78□□□□□ -1.96
PTPRC-214ENST00000530727 INSL3P51460 131 aa2.78□□□□□ -1.96
PTPRC-214ENST00000530727 CKS1BP61024 79 aa2.78□□□□□ -1.96
PTPRC-214ENST00000530727 HBBP68871 147 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms