RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 DMBT1Q9UGM3 2413 aaPredicted RBP12.1□□□□□ -0.47
PCNX3-203ENST00000530174 HBBP68871 147 aa12.1□□□□□ -0.47
PCNX3-203ENST00000530174 CFAP161Q6P656 301 aa12.1□□□□□ -0.47
PCNX3-203ENST00000530174 SDIM1Q6ZPB5 146 aa12.1□□□□□ -0.47
PCNX3-203ENST00000530174 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.1□□□□□ -0.47
PCNX3-203ENST00000530174 MYCBP2O75592 4640 aa12.1□□□□□ -0.47
PCNX3-203ENST00000530174 A0A1B0GXF2 115 aa12.09□□□□□ -0.47
PCNX3-203ENST00000530174 LINC00862A6NCI5 91 aa12.09□□□□□ -0.47
PCNX3-203ENST00000530174 PPP1R2P9O14990 202 aa12.09□□□□□ -0.47
PCNX3-203ENST00000530174 RAB14P61106 215 aa12.09□□□□□ -0.47
PCNX3-203ENST00000530174 FOXI1Q12951 378 aa12.09□□□□□ -0.47
PCNX3-203ENST00000530174 CDC42SE2Q9NRR3 84 aa12.09□□□□□ -0.47
PCNX3-203ENST00000530174 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.08□□□□□ -0.48
PCNX3-203ENST00000530174 LINC00959A0A1B0GUT2 108 aa12.08□□□□□ -0.48
PCNX3-203ENST00000530174 PANO1I0J062 215 aa12.08□□□□□ -0.48
PCNX3-203ENST00000530174 S100A8P05109 93 aa12.08□□□□□ -0.48
PCNX3-203ENST00000530174 CKS2P33552 79 aa12.08□□□□□ -0.48
PCNX3-203ENST00000530174 XCL1P47992 114 aa12.08□□□□□ -0.48
PCNX3-203ENST00000530174 KIR2DL4Q99706 377 aa12.08□□□□□ -0.48
PCNX3-203ENST00000530174 F8W036 122 aa12.07□□□□□ -0.48
PCNX3-203ENST00000530174 CCL25O15444 150 aa12.07□□□□□ -0.48
PCNX3-203ENST00000530174 HIGD2BQ4VC39 106 aa12.07□□□□□ -0.48
PCNX3-203ENST00000530174 ZNF664Q8N3J9 261 aa12.07□□□□□ -0.48
PCNX3-203ENST00000530174 C20orf78Q9BR46 151 aa12.07□□□□□ -0.48
PCNX3-203ENST00000530174 TRBV24-1A0A075B6N3 115 aa12.06□□□□□ -0.48
PCNX3-203ENST00000530174 IGHV3-64A0A075B6Q5 118 aa12.06□□□□□ -0.48
PCNX3-203ENST00000530174 D6R8Y8 96 aa12.05□□□□□ -0.48
PCNX3-203ENST00000530174 TNFRSF6BO95407 300 aa12.05□□□□□ -0.48
PCNX3-203ENST00000530174 UBE2D4Q9Y2X8 147 aa12.05□□□□□ -0.48
PCNX3-203ENST00000530174 GVQW2A0A096LPI5 108 aaPredicted RBP12.04□□□□□ -0.48
PCNX3-203ENST00000530174 KRTAP10-4P60372 401 aaPredicted RBP12.04□□□□□ -0.48
PCNX3-203ENST00000530174 RPL32P62910 135 aaKnown RBP12.04□□□□□ -0.48
PCNX3-203ENST00000530174 PNRC1Q12796 327 aaPredicted RBP12.04□□□□□ -0.48
PCNX3-203ENST00000530174 SS18Q15532 418 aa12.04□□□□□ -0.48
PCNX3-203ENST00000530174 ATP5L2Q7Z4Y8 100 aa12.04□□□□□ -0.48
PCNX3-203ENST00000530174 CSDC2Q9Y534 153 aaKnown RBP12.04□□□□□ -0.48
PCNX3-203ENST00000530174 NPYP01303 97 aa12.03□□□□□ -0.48
PCNX3-203ENST00000530174 SMAGPQ0VAQ4 97 aa12.03□□□□□ -0.48
PCNX3-203ENST00000530174 CIRBPQ14011 172 aaKnown RBP12.03□□□□□ -0.48
PCNX3-203ENST00000530174 CLLU1Q5K131 121 aa12.03□□□□□ -0.48
PCNX3-203ENST00000530174 SMIM2Q9BVW6 85 aa12.03□□□□□ -0.48
PCNX3-203ENST00000530174 RNASE13Q5GAN3 156 aaKnown RBP12.02□□□□□ -0.49
PCNX3-203ENST00000530174 HERC1Q15751 4861 aa12.02□□□□□ -0.49
PCNX3-203ENST00000530174 PPBPP02775 128 aa12.01□□□□□ -0.49
PCNX3-203ENST00000530174 CHTF8P0CG12 524 aa12.01□□□□□ -0.49
PCNX3-203ENST00000530174 CD164L2Q6UWJ8 174 aa12.01□□□□□ -0.49
PCNX3-203ENST00000530174 TMEM18Q96B42 140 aa12.01□□□□□ -0.49
PCNX3-203ENST00000530174 IGHV1-58A0A0C4DH39 117 aa12□□□□□ -0.49
PCNX3-203ENST00000530174 PHOX2AO14813 284 aa12□□□□□ -0.49
PCNX3-203ENST00000530174 TCAPO15273 167 aa12□□□□□ -0.49
PCNX3-203ENST00000530174 MT-ND4LP03901 98 aa12□□□□□ -0.49
PCNX3-203ENST00000530174 Q6ZUT4 128 aa12□□□□□ -0.49
PCNX3-203ENST00000530174 ANAPC16Q96DE5 110 aa12□□□□□ -0.49
PCNX3-203ENST00000530174 TIMM21Q9BVV7 248 aa12□□□□□ -0.49
PCNX3-203ENST00000530174 RPL37AP61513 92 aaKnown RBP11.99□□□□□ -0.49
PCNX3-203ENST00000530174 RPL39P62891 51 aaKnown RBP11.99□□□□□ -0.49
PCNX3-203ENST00000530174 ORMDL3Q8N138 153 aa11.99□□□□□ -0.49
PCNX3-203ENST00000530174 SPACA4Q8TDM5 124 aa11.99□□□□□ -0.49
PCNX3-203ENST00000530174 C1orf196B1AJZ1 125 aa11.98□□□□□ -0.49
PCNX3-203ENST00000530174 COX6A2Q02221 97 aa11.98□□□□□ -0.49
PCNX3-203ENST00000530174 TMEM136Q6ZRR5 245 aa11.98□□□□□ -0.49
PCNX3-203ENST00000530174 LINC00526Q96FQ7 95 aa11.98□□□□□ -0.49
PCNX3-203ENST00000530174 TRAV13-1A0A0B4J241 112 aa11.97□□□□□ -0.49
PCNX3-203ENST00000530174 PRSS3P2Q8NHM4 247 aa11.97□□□□□ -0.49
PCNX3-203ENST00000530174 DPH3Q96FX2 82 aa11.97□□□□□ -0.49
PCNX3-203ENST00000530174 PRELID3AQ96N28 172 aa11.97□□□□□ -0.49
PCNX3-203ENST00000530174 A0A087WYN8 130 aa11.96□□□□□ -0.49
PCNX3-203ENST00000530174 IFITM2Q01629 132 aa11.96□□□□□ -0.49
PCNX3-203ENST00000530174 FAM104AQ969W3 186 aa11.95□□□□□ -0.5
PCNX3-203ENST00000530174 J3QL48 77 aa11.94□□□□□ -0.5
PCNX3-203ENST00000530174 COX7A2LO14548 114 aa11.94□□□□□ -0.5
PCNX3-203ENST00000530174 ADCYAP1P18509 176 aa11.94□□□□□ -0.5
PCNX3-203ENST00000530174 MALP21145 153 aa11.94□□□□□ -0.5
PCNX3-203ENST00000530174 SPANXA1Q9NS26 97 aa11.94□□□□□ -0.5
PCNX3-203ENST00000530174 IGKV2-24A0A0C4DH68 120 aa11.93□□□□□ -0.5
PCNX3-203ENST00000530174 ZNF561-AS1K7EIQ3 104 aa11.93□□□□□ -0.5
PCNX3-203ENST00000530174 UQCC3Q6UW78 93 aa11.93□□□□□ -0.5
PCNX3-203ENST00000530174 CARD19Q96LW7 228 aa11.93□□□□□ -0.5
PCNX3-203ENST00000530174 OPRPNQ99935 248 aaPredicted RBP11.93□□□□□ -0.5
PCNX3-203ENST00000530174 PLAC8Q9NZF1 115 aa11.93□□□□□ -0.5
PCNX3-203ENST00000530174 KRTAP29-1A8MX34 341 aaPredicted RBP11.92□□□□□ -0.5
PCNX3-203ENST00000530174 RAB5AP20339 215 aa11.92□□□□□ -0.5
PCNX3-203ENST00000530174 MAJINQ3KP22 176 aa11.92□□□□□ -0.5
PCNX3-203ENST00000530174 LAMTOR2Q9Y2Q5 125 aa11.92□□□□□ -0.5
PCNX3-203ENST00000530174 A0A096LNI7 61 aa11.91□□□□□ -0.5
PCNX3-203ENST00000530174 LOC389332A0A1B0GUA5 103 aa11.91□□□□□ -0.5
PCNX3-203ENST00000530174 TMEM218A2RU14 115 aa11.91□□□□□ -0.5
PCNX3-203ENST00000530174 MRPS36P82909 103 aaKnown RBP11.91□□□□□ -0.5
PCNX3-203ENST00000530174 SYCNQ0VAF6 134 aa11.91□□□□□ -0.5
PCNX3-203ENST00000530174 C5orf38Q86SI9 138 aa11.91□□□□□ -0.5
PCNX3-203ENST00000530174 IGLV4-69A0A075B6H9 119 aa11.9□□□□□ -0.5
PCNX3-203ENST00000530174 PRSS47A8MTI9 375 aa11.9□□□□□ -0.5
PCNX3-203ENST00000530174 HNRNPA3P51991 378 aaKnown RBP11.9□□□□□ -0.5
PCNX3-203ENST00000530174 MAP1LC3AQ9H492 121 aa11.9□□□□□ -0.5
PCNX3-203ENST00000530174 IFITM10A6NMD0 228 aa11.88□□□□□ -0.51
PCNX3-203ENST00000530174 IFI27P40305 119 aaPredicted RBP11.88□□□□□ -0.51
PCNX3-203ENST00000530174 IMMP2LQ96T52 175 aa11.88□□□□□ -0.51
PCNX3-203ENST00000530174 PKIGQ9Y2B9 76 aa11.88□□□□□ -0.51
PCNX3-203ENST00000530174 LRP1Q07954 4544 aaKnown RBP11.87□□□□□ -0.51
PCNX3-203ENST00000530174 APOMO95445 188 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms