RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 TRAV9-1A0A075B6T8 112 aa8.32□□□□□ -1.08
CCDC90B-216ENST00000529856 LOC100996750A0A140TA64 210 aa8.32□□□□□ -1.08
CCDC90B-216ENST00000529856 HLA-DQA1P01909 254 aa8.32□□□□□ -1.08
CCDC90B-216ENST00000529856 MRPL52Q86TS9 123 aaKnown RBP8.32□□□□□ -1.08
CCDC90B-216ENST00000529856 TMEM101Q96IK0 257 aa8.32□□□□□ -1.08
CCDC90B-216ENST00000529856 PRELID3AQ96N28 172 aa8.32□□□□□ -1.08
CCDC90B-216ENST00000529856 SMIM2Q9BVW6 85 aa8.32□□□□□ -1.08
CCDC90B-216ENST00000529856 KRTAP4-6Q9BYQ5 205 aa8.32□□□□□ -1.08
CCDC90B-216ENST00000529856 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.31□□□□□ -1.08
CCDC90B-216ENST00000529856 USP17L23D6RBM5 183 aa8.31□□□□□ -1.08
CCDC90B-216ENST00000529856 TCAPO15273 167 aa8.31□□□□□ -1.08
CCDC90B-216ENST00000529856 C14orf177Q52M58 125 aa8.31□□□□□ -1.08
CCDC90B-216ENST00000529856 CLRN3Q8NCR9 226 aa8.31□□□□□ -1.08
CCDC90B-216ENST00000529856 OR5A1Q8NGJ0 315 aa8.31□□□□□ -1.08
CCDC90B-216ENST00000529856 IGKV3OR2-268A0A0C4DH90 116 aa8.3□□□□□ -1.08
CCDC90B-216ENST00000529856 PRSS47A8MTI9 375 aa8.3□□□□□ -1.08
CCDC90B-216ENST00000529856 RHEBQ15382 184 aa8.3□□□□□ -1.08
CCDC90B-216ENST00000529856 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
CCDC90B-216ENST00000529856 LAMTOR2Q9Y2Q5 125 aa8.3□□□□□ -1.08
CCDC90B-216ENST00000529856 HSPG2P98160 4391 aa8.3□□□□□ -1.08
CCDC90B-216ENST00000529856 S100PP25815 95 aa8.29□□□□□ -1.08
CCDC90B-216ENST00000529856 SMAGPQ0VAQ4 97 aa8.29□□□□□ -1.08
CCDC90B-216ENST00000529856 ZNF664Q8N3J9 261 aa8.29□□□□□ -1.08
CCDC90B-216ENST00000529856 TMEM18Q96B42 140 aa8.29□□□□□ -1.08
CCDC90B-216ENST00000529856 CSDC2Q9Y534 153 aaKnown RBP8.29□□□□□ -1.08
CCDC90B-216ENST00000529856 DGAT2L7PQ6IED9 249 aa8.28□□□□□ -1.08
CCDC90B-216ENST00000529856 TIMM21Q9BVV7 248 aa8.28□□□□□ -1.08
CCDC90B-216ENST00000529856 RPS10P5Q9NQ39 176 aa8.28□□□□□ -1.08
CCDC90B-216ENST00000529856 UBE2D4Q9Y2X8 147 aa8.28□□□□□ -1.08
CCDC90B-216ENST00000529856 LINC00959A0A1B0GUT2 108 aa8.27□□□□□ -1.09
CCDC90B-216ENST00000529856 GAGE12HA6NDE8 117 aa8.27□□□□□ -1.09
CCDC90B-216ENST00000529856 APOC3P02656 99 aa8.27□□□□□ -1.09
CCDC90B-216ENST00000529856 PRSS1P07477 247 aa8.27□□□□□ -1.09
CCDC90B-216ENST00000529856 XGP55808 180 aa8.27□□□□□ -1.09
CCDC90B-216ENST00000529856 CHCHD10Q8WYQ3 142 aaPredicted RBP8.27□□□□□ -1.09
CCDC90B-216ENST00000529856 MAP1LC3AQ9H492 121 aa8.27□□□□□ -1.09
CCDC90B-216ENST00000529856 DNAH8Q96JB1 4490 aa8.26□□□□□ -1.09
CCDC90B-216ENST00000529856 LOC389332A0A1B0GUA5 103 aa8.26□□□□□ -1.09
CCDC90B-216ENST00000529856 RAB5AP20339 215 aa8.26□□□□□ -1.09
CCDC90B-216ENST00000529856 RPL39P62891 51 aaKnown RBP8.26□□□□□ -1.09
CCDC90B-216ENST00000529856 KRTAP17-1Q9BYP8 105 aa8.26□□□□□ -1.09
CCDC90B-216ENST00000529856 SS18Q15532 418 aa8.25□□□□□ -1.09
CCDC90B-216ENST00000529856 NDUFA5Q16718 116 aa8.25□□□□□ -1.09
CCDC90B-216ENST00000529856 KIAA1644Q3SXP7 199 aa8.25□□□□□ -1.09
CCDC90B-216ENST00000529856 COX19Q49B96 90 aa8.25□□□□□ -1.09
CCDC90B-216ENST00000529856 SVBPQ8N300 66 aa8.25□□□□□ -1.09
CCDC90B-216ENST00000529856 Q8N8P6 123 aa8.25□□□□□ -1.09
CCDC90B-216ENST00000529856 GNB1LQ9BYB4 327 aa8.25□□□□□ -1.09
CCDC90B-216ENST00000529856 CCL25O15444 150 aa8.24□□□□□ -1.09
CCDC90B-216ENST00000529856 SNAPINO95295 136 aa8.24□□□□□ -1.09
CCDC90B-216ENST00000529856 FOXI1Q12951 378 aa8.24□□□□□ -1.09
CCDC90B-216ENST00000529856 LINC01620Q4KN68 170 aa8.24□□□□□ -1.09
CCDC90B-216ENST00000529856 CFAP161Q6P656 301 aa8.24□□□□□ -1.09
CCDC90B-216ENST00000529856 SPANXA1Q9NS26 97 aa8.24□□□□□ -1.09
CCDC90B-216ENST00000529856 FAM30AQ9NZY2 134 aa8.24□□□□□ -1.09
CCDC90B-216ENST00000529856 XCL1P47992 114 aa8.23□□□□□ -1.09
CCDC90B-216ENST00000529856 RNASE13Q5GAN3 156 aaKnown RBP8.23□□□□□ -1.09
CCDC90B-216ENST00000529856 Q6ZUT4 128 aa8.23□□□□□ -1.09
CCDC90B-216ENST00000529856 FAM104AQ969W3 186 aa8.23□□□□□ -1.09
CCDC90B-216ENST00000529856 hDV102S1A0JD36 115 aa8.22□□□□□ -1.09
CCDC90B-216ENST00000529856 C1orf196B1AJZ1 125 aa8.22□□□□□ -1.09
CCDC90B-216ENST00000529856 MRPS36P82909 103 aaKnown RBP8.22□□□□□ -1.09
CCDC90B-216ENST00000529856 CD164L2Q6UWJ8 174 aa8.22□□□□□ -1.09
CCDC90B-216ENST00000529856 Q6ZSA8 131 aa8.22□□□□□ -1.09
CCDC90B-216ENST00000529856 Q8N1X5 172 aa8.22□□□□□ -1.09
CCDC90B-216ENST00000529856 C15orf56Q8N910 161 aa8.22□□□□□ -1.09
CCDC90B-216ENST00000529856 NXT2Q9NPJ8 142 aaKnown RBP8.22□□□□□ -1.09
CCDC90B-216ENST00000529856 K7EMI3 77 aa8.21□□□□□ -1.1
CCDC90B-216ENST00000529856 MT-ND6P03923 174 aa8.21□□□□□ -1.1
CCDC90B-216ENST00000529856 IFI27P40305 119 aaPredicted RBP8.21□□□□□ -1.1
CCDC90B-216ENST00000529856 CNBPP62633 177 aaKnown RBP8.21□□□□□ -1.1
CCDC90B-216ENST00000529856 ORMDL2Q53FV1 153 aa8.21□□□□□ -1.1
CCDC90B-216ENST00000529856 C9orf163Q8N9P6 203 aa8.21□□□□□ -1.1
CCDC90B-216ENST00000529856 OPRPNQ99935 248 aaPredicted RBP8.21□□□□□ -1.1
CCDC90B-216ENST00000529856 ALKBH7Q9BT30 221 aaPredicted RBP8.21□□□□□ -1.1
CCDC90B-216ENST00000529856 MRPL18Q9H0U6 180 aaKnown RBP8.21□□□□□ -1.1
CCDC90B-216ENST00000529856 PYGO1Q9Y3Y4 419 aa8.21□□□□□ -1.1
CCDC90B-216ENST00000529856 TGIF2-C20orf24A0A0A6YYL0 155 aa8.2□□□□□ -1.1
CCDC90B-216ENST00000529856 TRAV13-1A0A0B4J241 112 aa8.2□□□□□ -1.1
CCDC90B-216ENST00000529856 SLPIP03973 132 aa8.2□□□□□ -1.1
CCDC90B-216ENST00000529856 FABP9Q0Z7S8 132 aa8.2□□□□□ -1.1
CCDC90B-216ENST00000529856 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
CCDC90B-216ENST00000529856 AP5S1Q9NUS5 200 aa8.2□□□□□ -1.1
CCDC90B-216ENST00000529856 HAMPP81172 84 aa8.19□□□□□ -1.1
CCDC90B-216ENST00000529856 C2orf66Q6UXQ4 117 aa8.19□□□□□ -1.1
CCDC90B-216ENST00000529856 SLC7A5P1Q8MH63 180 aa8.19□□□□□ -1.1
CCDC90B-216ENST00000529856 CYSLTR1Q9Y271 337 aa8.19□□□□□ -1.1
CCDC90B-216ENST00000529856 GVQW2A0A096LPI5 108 aaPredicted RBP8.18□□□□□ -1.1
CCDC90B-216ENST00000529856 IGHV1-58A0A0C4DH39 117 aa8.18□□□□□ -1.1
CCDC90B-216ENST00000529856 HIGD2BQ4VC39 106 aa8.18□□□□□ -1.1
CCDC90B-216ENST00000529856 PRSS3P2Q8NHM4 247 aa8.18□□□□□ -1.1
CCDC90B-216ENST00000529856 FAT1Q14517 4588 aa8.17□□□□□ -1.1
CCDC90B-216ENST00000529856 IGLV4-3A0A075B6K6 122 aa8.17□□□□□ -1.1
CCDC90B-216ENST00000529856 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.17□□□□□ -1.1
CCDC90B-216ENST00000529856 G0S2P27469 103 aa8.17□□□□□ -1.1
CCDC90B-216ENST00000529856 SDIM1Q6ZPB5 146 aa8.17□□□□□ -1.1
CCDC90B-216ENST00000529856 TMEM141Q96I45 108 aa8.17□□□□□ -1.1
CCDC90B-216ENST00000529856 TRAPPC1Q9Y5R8 145 aa8.17□□□□□ -1.1
CCDC90B-216ENST00000529856 LINC01546A6NGU7 62 aa8.16□□□□□ -1.1
CCDC90B-216ENST00000529856 IGIPA6NJ69 53 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms