RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 UQCR10Q9UDW1 63 aa2.27□□□□□ -2.05
PTPRC-213ENST00000529828 KLK12Q9UKR0 248 aa2.27□□□□□ -2.05
PTPRC-213ENST00000529828 WDR83OSQ9Y284 106 aa2.27□□□□□ -2.05
PTPRC-213ENST00000529828 B4DEV8 164 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 UMAD1C9J7I0 102 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 HIST1H2BKO60814 126 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 SIX6O95475 246 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 HIST1H2BJP06899 126 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 ADCYAP1P18509 176 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 HIST1H2BOP23527 126 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 HIST1H2BBP33778 126 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 HIST1H2BDP58876 126 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 HIST1H2BCP62807 126 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 GNG5P63218 68 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 HIST2H2BEQ16778 126 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 TDRG1Q3Y452 100 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.26□□□□□ -2.05
PTPRC-213ENST00000529828 Q6AWC8 147 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 KCNRGQ8N5I3 272 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 STPG4Q8N801 248 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 TMEM75Q8N9X5 138 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 HIST1H2BHQ93079 126 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 BORCS7Q96B45 105 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 FXYD5Q96DB9 178 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 HIST1H2BNQ99877 126 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 HIST1H2BMQ99879 126 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 PAXXQ9BUH6 204 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 SPANXDQ9BXN6 97 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 ARL2-SNX15V9GYD0 113 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 TRAV8-1A0A0A6YYK1 113 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 TRBV6-4A0A1B0GX49 114 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 C9JAW5 83 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 HLA-DQA1P01909 254 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 CSN1S1P47710 185 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 FAM231DQ6ZW35 169 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 OR10G7Q8NGN6 311 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 OR2T35Q8NGX2 323 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 RMI2Q96E14 147 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 TMEM101Q96IK0 257 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 AQP10Q96PS8 301 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 SDF2L1Q9HCN8 221 aa2.26□□□□□ -2.05
PTPRC-213ENST00000529828 KANTRA0A1W2PQU2 76 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 DIRC3C9JPN6 131 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 H3BS24 57 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 TPT1P13693 172 aaKnown RBP2.25□□□□□ -2.05
PTPRC-213ENST00000529828 RPS10P46783 165 aaKnown RBP2.25□□□□□ -2.05
PTPRC-213ENST00000529828 UBE2L3P68036 154 aaKnown RBP2.25□□□□□ -2.05
PTPRC-213ENST00000529828 IL15RAQ13261 267 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 ZNF506Q5JVG8 444 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 TEX43Q6ZNM6 134 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 Q6ZRU5 148 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 GOLT1AQ6ZVE7 132 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 C14orf178Q8N769 122 aaPredicted RBP2.25□□□□□ -2.05
PTPRC-213ENST00000529828 TVP23CQ96ET8 276 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 VAMP8Q9BV40 100 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 NPCDR1Q9BY65 106 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 DPH3P1Q9H4G8 78 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 JPT2Q9H910 190 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 RPS10P5Q9NQ39 176 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 C11orf21Q9P2W6 132 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 A0A087WWC5 75 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 TRAV21A0A0B4J279 112 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 A0A1B0GV50 99 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 BCL2L11O43521 198 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 PRSS1P07477 247 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 SEC11BP0C7V7 166 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 CHTF8P0CG12 524 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 LINC00694P0DN24 101 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 MGST1P10620 155 aaKnown RBP2.25□□□□□ -2.05
PTPRC-213ENST00000529828 ZNF80P51504 273 aaPredicted RBP2.25□□□□□ -2.05
PTPRC-213ENST00000529828 HBG1P69891 147 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 HBG2P69892 147 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 SERF2P84101 59 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 MRPL54Q6P161 138 aaKnown RBP2.25□□□□□ -2.05
PTPRC-213ENST00000529828 CYB561D1Q8N8Q1 229 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 IMMP2LQ96T52 175 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 C11orf1Q9H5F2 150 aa2.25□□□□□ -2.05
PTPRC-213ENST00000529828 TRAV1-1A0A0B4J248 108 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 C7orf77A4D0Y5 90 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 RBAKDNA6NC62 111 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 TMEM262E9PQX1 116 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 ATP5LO75964 103 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 SPINK8P0C7L1 97 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 NTF3P20783 257 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 CLPSL2Q6UWE3 100 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 TMEM252Q8N6L7 170 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 ZC2HC1AQ96GY0 325 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 YPEL4Q96NS1 127 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 WDR61Q9GZS3 305 aaKnown RBP2.24□□□□□ -2.05
PTPRC-213ENST00000529828 PARLQ9H300 379 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 PGPA6NDG6 321 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 A6NDN8 102 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 C17orf112F2Z3M2 114 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 CRPP02741 224 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 C14orf177Q52M58 125 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 UFSP1Q6NVU6 142 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 RASL11AQ6T310 242 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 ENHOQ6UWT2 76 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 CMTM2Q8TAZ6 248 aa2.24□□□□□ -2.05
PTPRC-213ENST00000529828 PLEKHB2Q96CS7 222 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms