RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 MANBALQ9NQG1 85 aa8.29□□□□□ -1.08
HIF3A-212ENST00000529205 PMCHP20382 165 aa8.28□□□□□ -1.08
HIF3A-212ENST00000529205 CAMPP49913 170 aa8.28□□□□□ -1.08
HIF3A-212ENST00000529205 MEF2BQ02080 365 aaPredicted RBP8.28□□□□□ -1.08
HIF3A-212ENST00000529205 C1orf137Q5JT78 98 aa8.28□□□□□ -1.08
HIF3A-212ENST00000529205 CLLU1Q5K131 121 aa8.28□□□□□ -1.08
HIF3A-212ENST00000529205 FAM210AQ96ND0 272 aa8.28□□□□□ -1.08
HIF3A-212ENST00000529205 RAB19A4D1S5 217 aa8.27□□□□□ -1.09
HIF3A-212ENST00000529205 SRP19P09132 144 aaKnown RBP8.27□□□□□ -1.09
HIF3A-212ENST00000529205 MALP21145 153 aa8.27□□□□□ -1.09
HIF3A-212ENST00000529205 CD164L2Q6UWJ8 174 aa8.27□□□□□ -1.09
HIF3A-212ENST00000529205 DIRC1Q969H9 104 aa8.27□□□□□ -1.09
HIF3A-212ENST00000529205 IGLV4-69A0A075B6H9 119 aa8.26□□□□□ -1.09
HIF3A-212ENST00000529205 SDHAF1A6NFY7 115 aa8.26□□□□□ -1.09
HIF3A-212ENST00000529205 I3L3M4 83 aa8.26□□□□□ -1.09
HIF3A-212ENST00000529205 A0A1W2PNN7 141 aa8.25□□□□□ -1.09
HIF3A-212ENST00000529205 CTRLP40313 264 aa8.25□□□□□ -1.09
HIF3A-212ENST00000529205 C9orf116Q5BN46 136 aaPredicted RBP8.25□□□□□ -1.09
HIF3A-212ENST00000529205 PRR26Q8N8Z3 221 aa8.25□□□□□ -1.09
HIF3A-212ENST00000529205 TSKUQ8WUA8 353 aa8.25□□□□□ -1.09
HIF3A-212ENST00000529205 RPL39LQ96EH5 51 aaKnown RBP8.25□□□□□ -1.09
HIF3A-212ENST00000529205 MRAP2Q96G30 205 aa8.25□□□□□ -1.09
HIF3A-212ENST00000529205 CAMK2N2Q96S95 79 aa8.25□□□□□ -1.09
HIF3A-212ENST00000529205 LPAP08519 4548 aa8.24□□□□□ -1.09
HIF3A-212ENST00000529205 APOMO95445 188 aa8.24□□□□□ -1.09
HIF3A-212ENST00000529205 K7EN84 100 aa8.23□□□□□ -1.09
HIF3A-212ENST00000529205 PDE6DO43924 150 aa8.23□□□□□ -1.09
HIF3A-212ENST00000529205 RPL18AQ02543 176 aaKnown RBP8.23□□□□□ -1.09
HIF3A-212ENST00000529205 NUDT10Q8NFP7 164 aa8.23□□□□□ -1.09
HIF3A-212ENST00000529205 NUDT11Q96G61 164 aa8.23□□□□□ -1.09
HIF3A-212ENST00000529205 CNFNQ9BYD5 112 aa8.23□□□□□ -1.09
HIF3A-212ENST00000529205 MED9Q9NWA0 146 aa8.23□□□□□ -1.09
HIF3A-212ENST00000529205 IGLV1-50A0A075B6I6 118 aa8.22□□□□□ -1.09
HIF3A-212ENST00000529205 C1orf196B1AJZ1 125 aa8.22□□□□□ -1.09
HIF3A-212ENST00000529205 COX7A2LO14548 114 aa8.22□□□□□ -1.09
HIF3A-212ENST00000529205 IGLV7-43P04211 117 aa8.22□□□□□ -1.09
HIF3A-212ENST00000529205 PRR4Q16378 134 aa8.22□□□□□ -1.09
HIF3A-212ENST00000529205 NUP35Q8NFH5 326 aa8.22□□□□□ -1.09
HIF3A-212ENST00000529205 KRTAP9-2Q9BYQ4 174 aa8.22□□□□□ -1.09
HIF3A-212ENST00000529205 CDC42SE2Q9NRR3 84 aa8.22□□□□□ -1.09
HIF3A-212ENST00000529205 TMEM250H0YL14 139 aa8.21□□□□□ -1.1
HIF3A-212ENST00000529205 UBE2D1P51668 147 aa8.21□□□□□ -1.1
HIF3A-212ENST00000529205 SMAGPQ0VAQ4 97 aa8.21□□□□□ -1.1
HIF3A-212ENST00000529205 PHF5AQ7RTV0 110 aaKnown RBP8.21□□□□□ -1.1
HIF3A-212ENST00000529205 C2orf48Q96LS8 159 aa8.21□□□□□ -1.1
HIF3A-212ENST00000529205 EIF5A2Q9GZV4 153 aaKnown RBP8.21□□□□□ -1.1
HIF3A-212ENST00000529205 RPP21Q9H633 154 aaKnown RBP8.21□□□□□ -1.1
HIF3A-212ENST00000529205 ST20Q9HBF5 79 aa8.21□□□□□ -1.1
HIF3A-212ENST00000529205 A0A087WZ39 114 aa8.2□□□□□ -1.1
HIF3A-212ENST00000529205 TRBV6-5A0A0K0K1A5 114 aa8.2□□□□□ -1.1
HIF3A-212ENST00000529205 H0Y9J4 135 aa8.2□□□□□ -1.1
HIF3A-212ENST00000529205 ESDP10768 282 aa8.2□□□□□ -1.1
HIF3A-212ENST00000529205 TAGLN2P37802 199 aaKnown RBP8.2□□□□□ -1.1
HIF3A-212ENST00000529205 MRPL52Q86TS9 123 aaKnown RBP8.2□□□□□ -1.1
HIF3A-212ENST00000529205 OCC1Q8TAD7 63 aa8.2□□□□□ -1.1
HIF3A-212ENST00000529205 LINC00862A6NCI5 91 aa8.19□□□□□ -1.1
HIF3A-212ENST00000529205 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.19□□□□□ -1.1
HIF3A-212ENST00000529205 TMEM242Q9NWH2 141 aa8.19□□□□□ -1.1
HIF3A-212ENST00000529205 C7orf77A4D0Y5 90 aa8.18□□□□□ -1.1
HIF3A-212ENST00000529205 TSHBP01222 138 aa8.18□□□□□ -1.1
HIF3A-212ENST00000529205 ADCYAP1P18509 176 aa8.18□□□□□ -1.1
HIF3A-212ENST00000529205 RPL13AP40429 203 aaKnown RBP8.18□□□□□ -1.1
HIF3A-212ENST00000529205 CEBPGP53567 150 aa8.18□□□□□ -1.1
HIF3A-212ENST00000529205 RAB14P61106 215 aa8.18□□□□□ -1.1
HIF3A-212ENST00000529205 RNF151Q2KHN1 245 aa8.18□□□□□ -1.1
HIF3A-212ENST00000529205 BORCS7Q96B45 105 aa8.18□□□□□ -1.1
HIF3A-212ENST00000529205 FOXA3P55318 350 aaPredicted RBP8.17□□□□□ -1.1
HIF3A-212ENST00000529205 COMMD7Q86VX2 200 aa8.17□□□□□ -1.1
HIF3A-212ENST00000529205 IMMP2LQ96T52 175 aa8.17□□□□□ -1.1
HIF3A-212ENST00000529205 RNASE7Q9H1E1 156 aaKnown RBP8.17□□□□□ -1.1
HIF3A-212ENST00000529205 FCER1GP30273 86 aa8.16□□□□□ -1.1
HIF3A-212ENST00000529205 PEA15Q15121 130 aa8.16□□□□□ -1.1
HIF3A-212ENST00000529205 LINC01551Q86U37 167 aa8.16□□□□□ -1.1
HIF3A-212ENST00000529205 OPRPNQ99935 248 aaPredicted RBP8.16□□□□□ -1.1
HIF3A-212ENST00000529205 TRAV13-1A0A0B4J241 112 aa8.15□□□□□ -1.1
HIF3A-212ENST00000529205 F8WDY8 70 aa8.15□□□□□ -1.1
HIF3A-212ENST00000529205 RPL23P62829 140 aaKnown RBP8.15□□□□□ -1.1
HIF3A-212ENST00000529205 SPAG11BQ08648 103 aa8.15□□□□□ -1.1
HIF3A-212ENST00000529205 C5orf38Q86SI9 138 aa8.15□□□□□ -1.1
HIF3A-212ENST00000529205 SMIM7Q9BQ49 75 aa8.15□□□□□ -1.1
HIF3A-212ENST00000529205 CSDC2Q9Y534 153 aaKnown RBP8.15□□□□□ -1.1
HIF3A-212ENST00000529205 TRBV27A0A0K0K1C4 114 aa8.14□□□□□ -1.11
HIF3A-212ENST00000529205 ZNF727A8MUV8 499 aa8.14□□□□□ -1.11
HIF3A-212ENST00000529205 A8MWL6 223 aa8.14□□□□□ -1.11
HIF3A-212ENST00000529205 GATCO43716 136 aaKnown RBP8.14□□□□□ -1.11
HIF3A-212ENST00000529205 OR10D4PQ8NGN7 298 aa8.14□□□□□ -1.11
HIF3A-212ENST00000529205 SMDT1Q9H4I9 107 aa8.14□□□□□ -1.11
HIF3A-212ENST00000529205 MRPL35Q9NZE8 188 aaKnown RBP8.14□□□□□ -1.11
HIF3A-212ENST00000529205 VCYO14598 125 aa8.13□□□□□ -1.11
HIF3A-212ENST00000529205 POLR2KP53803 58 aaKnown RBP8.13□□□□□ -1.11
HIF3A-212ENST00000529205 UBE2BP63146 152 aa8.13□□□□□ -1.11
HIF3A-212ENST00000529205 TMEM241Q24JQ0 296 aa8.13□□□□□ -1.11
HIF3A-212ENST00000529205 TMEM18Q96B42 140 aa8.13□□□□□ -1.11
HIF3A-212ENST00000529205 TMEM218A2RU14 115 aa8.12□□□□□ -1.11
HIF3A-212ENST00000529205 NDUFA1O15239 70 aa8.12□□□□□ -1.11
HIF3A-212ENST00000529205 KIR2DL4Q99706 377 aa8.12□□□□□ -1.11
HIF3A-212ENST00000529205 UBE2D4Q9Y2X8 147 aa8.12□□□□□ -1.11
HIF3A-212ENST00000529205 PPP1R17O96001 155 aa8.11□□□□□ -1.11
HIF3A-212ENST00000529205 RNASE13Q5GAN3 156 aaKnown RBP8.11□□□□□ -1.11
HIF3A-212ENST00000529205 FAM19A5Q7Z5A7 132 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms