RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 SUMO2P61956 95 aaKnown RBP10.35□□□□□ -0.75
CTSB-213ENST00000527215 SDIM1Q6ZPB5 146 aa10.35□□□□□ -0.75
CTSB-213ENST00000527215 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.35□□□□□ -0.75
CTSB-213ENST00000527215 FCER1GP30273 86 aa10.34□□□□□ -0.75
CTSB-213ENST00000527215 MRPL54Q6P161 138 aaKnown RBP10.34□□□□□ -0.75
CTSB-213ENST00000527215 CFAP161Q6P656 301 aa10.34□□□□□ -0.75
CTSB-213ENST00000527215 MRPL52Q86TS9 123 aaKnown RBP10.34□□□□□ -0.75
CTSB-213ENST00000527215 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.33□□□□□ -0.76
CTSB-213ENST00000527215 LINC00959A0A1B0GUT2 108 aa10.33□□□□□ -0.76
CTSB-213ENST00000527215 PANO1I0J062 215 aa10.33□□□□□ -0.76
CTSB-213ENST00000527215 PPP1R2P9O14990 202 aa10.33□□□□□ -0.76
CTSB-213ENST00000527215 HIGD2BQ4VC39 106 aa10.33□□□□□ -0.76
CTSB-213ENST00000527215 IGHV3-64A0A075B6Q5 118 aa10.32□□□□□ -0.76
CTSB-213ENST00000527215 LINC00862A6NCI5 91 aa10.32□□□□□ -0.76
CTSB-213ENST00000527215 CKS2P33552 79 aa10.32□□□□□ -0.76
CTSB-213ENST00000527215 XCL1P47992 114 aa10.32□□□□□ -0.76
CTSB-213ENST00000527215 HBBP68871 147 aa10.32□□□□□ -0.76
CTSB-213ENST00000527215 FOXI1Q12951 378 aa10.32□□□□□ -0.76
CTSB-213ENST00000527215 KIR2DL4Q99706 377 aa10.32□□□□□ -0.76
CTSB-213ENST00000527215 CDC42SE2Q9NRR3 84 aa10.32□□□□□ -0.76
CTSB-213ENST00000527215 A0A1B0GXF2 115 aa10.31□□□□□ -0.76
CTSB-213ENST00000527215 CCL25O15444 150 aa10.31□□□□□ -0.76
CTSB-213ENST00000527215 S100A8P05109 93 aa10.31□□□□□ -0.76
CTSB-213ENST00000527215 KRTAP10-4P60372 401 aaPredicted RBP10.31□□□□□ -0.76
CTSB-213ENST00000527215 RAB14P61106 215 aa10.31□□□□□ -0.76
CTSB-213ENST00000527215 ZNF664Q8N3J9 261 aa10.31□□□□□ -0.76
CTSB-213ENST00000527215 TRBV24-1A0A075B6N3 115 aa10.3□□□□□ -0.76
CTSB-213ENST00000527215 D6R8Y8 96 aa10.3□□□□□ -0.76
CTSB-213ENST00000527215 F8W036 122 aa10.3□□□□□ -0.76
CTSB-213ENST00000527215 TNFRSF6BO95407 300 aa10.3□□□□□ -0.76
CTSB-213ENST00000527215 SS18Q15532 418 aa10.3□□□□□ -0.76
CTSB-213ENST00000527215 C20orf78Q9BR46 151 aa10.3□□□□□ -0.76
CTSB-213ENST00000527215 UBE2D4Q9Y2X8 147 aa10.3□□□□□ -0.76
CTSB-213ENST00000527215 GVQW2A0A096LPI5 108 aaPredicted RBP10.29□□□□□ -0.76
CTSB-213ENST00000527215 CHTF8P0CG12 524 aa10.28□□□□□ -0.76
CTSB-213ENST00000527215 RPL32P62910 135 aaKnown RBP10.28□□□□□ -0.76
CTSB-213ENST00000527215 SMAGPQ0VAQ4 97 aa10.28□□□□□ -0.76
CTSB-213ENST00000527215 CIRBPQ14011 172 aaKnown RBP10.28□□□□□ -0.76
CTSB-213ENST00000527215 CSDC2Q9Y534 153 aaKnown RBP10.28□□□□□ -0.76
CTSB-213ENST00000527215 KRTAP29-1A8MX34 341 aaPredicted RBP10.27□□□□□ -0.77
CTSB-213ENST00000527215 NPYP01303 97 aa10.27□□□□□ -0.77
CTSB-213ENST00000527215 PNRC1Q12796 327 aaPredicted RBP10.27□□□□□ -0.77
CTSB-213ENST00000527215 RNASE13Q5GAN3 156 aaKnown RBP10.27□□□□□ -0.77
CTSB-213ENST00000527215 CD164L2Q6UWJ8 174 aa10.27□□□□□ -0.77
CTSB-213ENST00000527215 ATP5L2Q7Z4Y8 100 aa10.27□□□□□ -0.77
CTSB-213ENST00000527215 SMIM2Q9BVW6 85 aa10.27□□□□□ -0.77
CTSB-213ENST00000527215 IGHV1-58A0A0C4DH39 117 aa10.26□□□□□ -0.77
CTSB-213ENST00000527215 RPL37AP61513 92 aaKnown RBP10.26□□□□□ -0.77
CTSB-213ENST00000527215 TMEM18Q96B42 140 aa10.26□□□□□ -0.77
CTSB-213ENST00000527215 TCAPO15273 167 aa10.25□□□□□ -0.77
CTSB-213ENST00000527215 PPBPP02775 128 aa10.25□□□□□ -0.77
CTSB-213ENST00000527215 COX6A2Q02221 97 aa10.25□□□□□ -0.77
CTSB-213ENST00000527215 CLLU1Q5K131 121 aa10.25□□□□□ -0.77
CTSB-213ENST00000527215 Q6ZUT4 128 aa10.25□□□□□ -0.77
CTSB-213ENST00000527215 SPACA4Q8TDM5 124 aa10.25□□□□□ -0.77
CTSB-213ENST00000527215 ANAPC16Q96DE5 110 aa10.25□□□□□ -0.77
CTSB-213ENST00000527215 LINC00526Q96FQ7 95 aa10.25□□□□□ -0.77
CTSB-213ENST00000527215 DPH3Q96FX2 82 aa10.25□□□□□ -0.77
CTSB-213ENST00000527215 TIMM21Q9BVV7 248 aa10.25□□□□□ -0.77
CTSB-213ENST00000527215 PKHD1L1Q86WI1 4243 aa10.25□□□□□ -0.77
CTSB-213ENST00000527215 C1orf196B1AJZ1 125 aa10.24□□□□□ -0.77
CTSB-213ENST00000527215 PHOX2AO14813 284 aa10.24□□□□□ -0.77
CTSB-213ENST00000527215 MT-ND4LP03901 98 aa10.24□□□□□ -0.77
CTSB-213ENST00000527215 RPL39P62891 51 aaKnown RBP10.24□□□□□ -0.77
CTSB-213ENST00000527215 A0A087WYN8 130 aa10.23□□□□□ -0.77
CTSB-213ENST00000527215 TRAV13-1A0A0B4J241 112 aa10.23□□□□□ -0.77
CTSB-213ENST00000527215 ORMDL3Q8N138 153 aa10.23□□□□□ -0.77
CTSB-213ENST00000527215 PRSS3P2Q8NHM4 247 aa10.23□□□□□ -0.77
CTSB-213ENST00000527215 TMEM136Q6ZRR5 245 aa10.22□□□□□ -0.77
CTSB-213ENST00000527215 PRELID3AQ96N28 172 aa10.22□□□□□ -0.77
CTSB-213ENST00000527215 LRP1Q07954 4544 aaKnown RBP10.22□□□□□ -0.77
CTSB-213ENST00000527215 FAT3Q8TDW7 4589 aa10.21□□□□□ -0.77
CTSB-213ENST00000527215 IGKV2-24A0A0C4DH68 120 aa10.21□□□□□ -0.77
CTSB-213ENST00000527215 ZNF561-AS1K7EIQ3 104 aa10.21□□□□□ -0.77
CTSB-213ENST00000527215 FAM104AQ969W3 186 aa10.21□□□□□ -0.77
CTSB-213ENST00000527215 COX7A2LO14548 114 aa10.2□□□□□ -0.78
CTSB-213ENST00000527215 MALP21145 153 aa10.2□□□□□ -0.78
CTSB-213ENST00000527215 IFITM2Q01629 132 aa10.2□□□□□ -0.78
CTSB-213ENST00000527215 MAJINQ3KP22 176 aa10.2□□□□□ -0.78
CTSB-213ENST00000527215 CARD19Q96LW7 228 aa10.2□□□□□ -0.78
CTSB-213ENST00000527215 PLAC8Q9NZF1 115 aa10.2□□□□□ -0.78
CTSB-213ENST00000527215 A0A096LNI7 61 aa10.19□□□□□ -0.78
CTSB-213ENST00000527215 HNRNPA3P51991 378 aaKnown RBP10.19□□□□□ -0.78
CTSB-213ENST00000527215 OPRPNQ99935 248 aaPredicted RBP10.19□□□□□ -0.78
CTSB-213ENST00000527215 SPANXA1Q9NS26 97 aa10.19□□□□□ -0.78
CTSB-213ENST00000527215 IGLV4-69A0A075B6H9 119 aa10.18□□□□□ -0.78
CTSB-213ENST00000527215 OXTP01178 125 aa10.18□□□□□ -0.78
CTSB-213ENST00000527215 ADCYAP1P18509 176 aa10.18□□□□□ -0.78
CTSB-213ENST00000527215 RAB5AP20339 215 aa10.18□□□□□ -0.78
CTSB-213ENST00000527215 SYCNQ0VAF6 134 aa10.18□□□□□ -0.78
CTSB-213ENST00000527215 SERTAD4-AS1Q5TG53 156 aa10.18□□□□□ -0.78
CTSB-213ENST00000527215 C5orf38Q86SI9 138 aa10.18□□□□□ -0.78
CTSB-213ENST00000527215 LOC389332A0A1B0GUA5 103 aa10.17□□□□□ -0.78
CTSB-213ENST00000527215 PRSS47A8MTI9 375 aa10.17□□□□□ -0.78
CTSB-213ENST00000527215 MRPS36P82909 103 aaKnown RBP10.17□□□□□ -0.78
CTSB-213ENST00000527215 LAMTOR2Q9Y2Q5 125 aa10.17□□□□□ -0.78
CTSB-213ENST00000527215 UQCC3Q6UW78 93 aa10.16□□□□□ -0.78
CTSB-213ENST00000527215 STPG4Q8N801 248 aa10.16□□□□□ -0.78
CTSB-213ENST00000527215 MAP1LC3AQ9H492 121 aa10.16□□□□□ -0.78
CTSB-213ENST00000527215 PKIGQ9Y2B9 76 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 1001.1 ms