RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 HIST1H2BOP23527 126 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 HIST1H2BBP33778 126 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 HIST1H2BDP58876 126 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 HIST1H2BCP62807 126 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 HIST2H2BEQ16778 126 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.84□□□□□ -0.51
CAPN1-206ENST00000526966 FAM231DQ6ZW35 169 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 FER1L6-AS1Q8NA97 138 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 NUDT10Q8NFP7 164 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 HIST1H2BHQ93079 126 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 NUDT11Q96G61 164 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 HIST1H2BNQ99877 126 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 HIST1H2BMQ99879 126 aa11.84□□□□□ -0.51
CAPN1-206ENST00000526966 PHOX2AO14813 284 aa11.83□□□□□ -0.52
CAPN1-206ENST00000526966 COA6Q5JTJ3 125 aaKnown RBP11.83□□□□□ -0.52
CAPN1-206ENST00000526966 RASL11AQ6T310 242 aa11.83□□□□□ -0.52
CAPN1-206ENST00000526966 C15orf56Q8N910 161 aa11.83□□□□□ -0.52
CAPN1-206ENST00000526966 DPH3Q96FX2 82 aa11.83□□□□□ -0.52
CAPN1-206ENST00000526966 RPS20P60866 119 aaKnown RBP11.82□□□□□ -0.52
CAPN1-206ENST00000526966 CACNG7P62955 275 aa11.82□□□□□ -0.52
CAPN1-206ENST00000526966 TPPP3Q9BW30 176 aa11.82□□□□□ -0.52
CAPN1-206ENST00000526966 RNASE7Q9H1E1 156 aaKnown RBP11.82□□□□□ -0.52
CAPN1-206ENST00000526966 PCP4L1A6NKN8 68 aa11.81□□□□□ -0.52
CAPN1-206ENST00000526966 TRGC2P03986 189 aa11.81□□□□□ -0.52
CAPN1-206ENST00000526966 NDUFA6P56556 154 aa11.81□□□□□ -0.52
CAPN1-206ENST00000526966 WDR73Q6P4I2 378 aa11.81□□□□□ -0.52
CAPN1-206ENST00000526966 OR2D3Q8NGH3 330 aa11.81□□□□□ -0.52
CAPN1-206ENST00000526966 NIT2Q9NQR4 276 aa11.81□□□□□ -0.52
CAPN1-206ENST00000526966 OSTCQ9NRP0 149 aa11.81□□□□□ -0.52
CAPN1-206ENST00000526966 C7orf33Q8WU49 177 aa11.8□□□□□ -0.52
CAPN1-206ENST00000526966 RPP21Q9H633 154 aaKnown RBP11.8□□□□□ -0.52
CAPN1-206ENST00000526966 XKRY2A2RUG3 117 aa11.79□□□□□ -0.52
CAPN1-206ENST00000526966 TRGC1P0CF51 173 aa11.79□□□□□ -0.52
CAPN1-206ENST00000526966 HIST3H2BBQ8N257 126 aa11.79□□□□□ -0.52
CAPN1-206ENST00000526966 F2Z2F3 143 aa11.78□□□□□ -0.52
CAPN1-206ENST00000526966 UBE2L6O14933 153 aa11.78□□□□□ -0.52
CAPN1-206ENST00000526966 GATCO43716 136 aaKnown RBP11.78□□□□□ -0.52
CAPN1-206ENST00000526966 AMTP48728 403 aa11.78□□□□□ -0.52
CAPN1-206ENST00000526966 COX6A2Q02221 97 aa11.78□□□□□ -0.52
CAPN1-206ENST00000526966 COTL1Q14019 142 aa11.78□□□□□ -0.52
CAPN1-206ENST00000526966 CT83Q5H943 113 aa11.78□□□□□ -0.52
CAPN1-206ENST00000526966 LINC01600Q96MT4 127 aa11.78□□□□□ -0.52
CAPN1-206ENST00000526966 DPH3P1Q9H4G8 78 aa11.78□□□□□ -0.52
CAPN1-206ENST00000526966 GAGE12HA6NDE8 117 aa11.77□□□□□ -0.53
CAPN1-206ENST00000526966 PRR3P79522 188 aaKnown RBP11.77□□□□□ -0.53
CAPN1-206ENST00000526966 CFAP161Q6P656 301 aa11.77□□□□□ -0.53
CAPN1-206ENST00000526966 A8MWL6 223 aa11.76□□□□□ -0.53
CAPN1-206ENST00000526966 PRSS3P2Q8NHM4 247 aa11.76□□□□□ -0.53
CAPN1-206ENST00000526966 V9GYV3 84 aa11.76□□□□□ -0.53
CAPN1-206ENST00000526966 IFITM10A6NMD0 228 aa11.75□□□□□ -0.53
CAPN1-206ENST00000526966 NTF3P20783 257 aa11.75□□□□□ -0.53
CAPN1-206ENST00000526966 LYZL1Q6UWQ5 148 aa11.75□□□□□ -0.53
CAPN1-206ENST00000526966 GVQW2A0A096LPI5 108 aaPredicted RBP11.74□□□□□ -0.53
CAPN1-206ENST00000526966 CTRLP40313 264 aa11.74□□□□□ -0.53
CAPN1-206ENST00000526966 MAJINQ3KP22 176 aa11.74□□□□□ -0.53
CAPN1-206ENST00000526966 COX19Q49B96 90 aa11.74□□□□□ -0.53
CAPN1-206ENST00000526966 HIGD2BQ4VC39 106 aa11.74□□□□□ -0.53
CAPN1-206ENST00000526966 IGKV2-24A0A0C4DH68 120 aa11.73□□□□□ -0.53
CAPN1-206ENST00000526966 FAM231BA6NCW3 169 aa11.73□□□□□ -0.53
CAPN1-206ENST00000526966 FOXA3P55318 350 aaPredicted RBP11.73□□□□□ -0.53
CAPN1-206ENST00000526966 TSKUQ8WUA8 353 aa11.73□□□□□ -0.53
CAPN1-206ENST00000526966 GTSF1Q8WW33 167 aa11.73□□□□□ -0.53
CAPN1-206ENST00000526966 CNFNQ9BYD5 112 aa11.73□□□□□ -0.53
CAPN1-206ENST00000526966 IGKV3OR2-268A0A0C4DH90 116 aa11.72□□□□□ -0.53
CAPN1-206ENST00000526966 STPG4Q8N801 248 aa11.72□□□□□ -0.53
CAPN1-206ENST00000526966 CHCHD10Q8WYQ3 142 aaPredicted RBP11.72□□□□□ -0.53
CAPN1-206ENST00000526966 A0A0J9YXV3 536 aa11.71□□□□□ -0.53
CAPN1-206ENST00000526966 PYY3Q5JQD4 70 aa11.71□□□□□ -0.53
CAPN1-206ENST00000526966 GATD1Q8NB37 220 aa11.71□□□□□ -0.53
CAPN1-206ENST00000526966 OR10D4PQ8NGN7 298 aa11.71□□□□□ -0.53
CAPN1-206ENST00000526966 PACRGQ96M98 296 aaPredicted RBP11.71□□□□□ -0.53
CAPN1-206ENST00000526966 A0A096LNI7 61 aa11.7□□□□□ -0.54
CAPN1-206ENST00000526966 ODF1Q14990 250 aa11.7□□□□□ -0.54
CAPN1-206ENST00000526966 HIST1H2BLQ99880 126 aa11.7□□□□□ -0.54
CAPN1-206ENST00000526966 SMIM27A0A1W2PRY6 76 aa11.69□□□□□ -0.54
CAPN1-206ENST00000526966 H7C423 109 aa11.69□□□□□ -0.54
CAPN1-206ENST00000526966 NCR2O95944 276 aa11.69□□□□□ -0.54
CAPN1-206ENST00000526966 AMMECR1LQ6DCA0 310 aa11.69□□□□□ -0.54
CAPN1-206ENST00000526966 TMEM18Q96B42 140 aa11.69□□□□□ -0.54
CAPN1-206ENST00000526966 TRAV26-2A0A0B4J265 109 aa11.68□□□□□ -0.54
CAPN1-206ENST00000526966 HIGD1CA8MV81 97 aa11.68□□□□□ -0.54
CAPN1-206ENST00000526966 KRTAP10-8P60410 259 aa11.68□□□□□ -0.54
CAPN1-206ENST00000526966 FOXI1Q12951 378 aa11.68□□□□□ -0.54
CAPN1-206ENST00000526966 JOSD1Q15040 202 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-206ENST00000526966 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-206ENST00000526966 IGKV2-29A2NJV5 120 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-206ENST00000526966 LINC00587B1AMM8 73 aa11.67□□□□□ -0.54
CAPN1-206ENST00000526966 MT-ND6P03923 174 aa11.67□□□□□ -0.54
CAPN1-206ENST00000526966 FABP4P15090 132 aa11.67□□□□□ -0.54
CAPN1-206ENST00000526966 TWIST1Q15672 202 aa11.67□□□□□ -0.54
CAPN1-206ENST00000526966 SPINK6Q6UWN8 80 aa11.67□□□□□ -0.54
CAPN1-206ENST00000526966 LINC00474Q9P2X8 69 aa11.67□□□□□ -0.54
CAPN1-206ENST00000526966 NAT8BQ9UHF3 227 aa11.67□□□□□ -0.54
CAPN1-206ENST00000526966 APCSP02743 223 aa11.66□□□□□ -0.54
CAPN1-206ENST00000526966 FGF6P10767 208 aa11.66□□□□□ -0.54
CAPN1-206ENST00000526966 RNASEKQ6P5S7 137 aaKnown RBP11.66□□□□□ -0.54
CAPN1-206ENST00000526966 NUP35Q8NFH5 326 aa11.66□□□□□ -0.54
CAPN1-206ENST00000526966 RPL39LQ96EH5 51 aaKnown RBP11.66□□□□□ -0.54
CAPN1-206ENST00000526966 TRAPPC1Q9Y5R8 145 aa11.66□□□□□ -0.54
CAPN1-206ENST00000526966 TSTD3H0UI37 97 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms