RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 EVI2AP22794 236 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 ZNF93P35789 620 aaPredicted RBP1.7□□□□□ -2.14
CD44-223ENST00000526553 KRTDAPP60985 99 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 GNG3P63215 75 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 BTG2P78543 158 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 LTC4SQ16873 150 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 Q1T7F1 81 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 Q6ZQT0 140 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 SNX29P2Q8IUI4 249 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 FAM24BQ8N5W8 94 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 C9orf163Q8N9P6 203 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 OR4S1Q8NGB4 309 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 MED29Q9NX70 200 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 TAS2R4Q9NYW5 299 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 PLCE1Q9P212 2302 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 NAT8BQ9UHF3 227 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 BOKQ9UMX3 212 aaPredicted RBP1.7□□□□□ -2.14
CD44-223ENST00000526553 LAMTOR2Q9Y2Q5 125 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 AMMECR1Q9Y4X0 333 aaPredicted RBP1.7□□□□□ -2.14
CD44-223ENST00000526553 SVEP1Q4LDE5 3571 aa1.7□□□□□ -2.14
CD44-223ENST00000526553 TENM1Q9UKZ4 2725 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 WNK1Q9H4A3 2382 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 TRGV10A0A0A0MS01 117 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 DUXBA0A1W2PPF3 345 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 C17orf112F2Z3M2 114 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 GPR31O00270 319 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 SNCGO76070 127 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 CTSDP07339 412 aaPredicted RBP1.69□□□□□ -2.14
CD44-223ENST00000526553 BAALC-AS2P0C853 105 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 FABP2P12104 132 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 CRYGSP22914 178 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 SRIP30626 198 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 BRS3P32247 399 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 TAS2R41P59536 307 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 RPS25P62851 125 aaKnown RBP1.69□□□□□ -2.14
CD44-223ENST00000526553 SURF2Q15527 256 aaPredicted RBP1.69□□□□□ -2.14
CD44-223ENST00000526553 MPV17LQ2QL34 196 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 RPL7L1Q6DKI1 246 aaKnown RBP1.69□□□□□ -2.14
CD44-223ENST00000526553 HEPN1Q6WQI6 88 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 ZCCHC23Q6ZST2 131 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 BAGE3Q86Y29 109 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 BAGE2Q86Y30 109 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 TMEM229BQ8NBD8 167 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 SMIM4Q8WVI0 70 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 ADAT3Q96EY9 351 aaPredicted RBP1.69□□□□□ -2.14
CD44-223ENST00000526553 PBOV1Q9GZY1 135 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 TMEM191AQ9H0A3 160 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 ACER3Q9NUN7 267 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 SMPXQ9UHP9 88 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 HSPB8Q9UJY1 196 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 TNFSF18Q9UNG2 199 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 MED31Q9Y3C7 131 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 DNAJC15Q9Y5T4 150 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 V9GYH0 126 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 ARFGEF3Q5TH69 2177 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 RYR3Q15413 4870 aa1.69□□□□□ -2.14
CD44-223ENST00000526553 TRGV2A0A075B6R0 118 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 IGKV1-9A0A0C4DH69 117 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 RIIAD1A6NNX1 92 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 DEFB108AA8MXU0 73 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 M0R129 80 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 SIX6O95475 246 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 MPC2O95563 127 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 CD14P08571 375 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 MPC1LP0DKB6 136 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 CRYGAP11844 174 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 ASIPP42127 132 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 CRYBA4P53673 196 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 GNG5P63218 68 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 SERF2P84101 59 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 PLCXD2Q0VAA5 305 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 MSMO1Q15800 293 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 RTL8BQ17RB0 113 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 FAM74A1Q5RGS3 127 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 GLYATL3Q5SZD4 288 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 SCIMPQ6UWF3 145 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 Q6ZRN7 208 aaPredicted RBP1.68□□□□□ -2.14
CD44-223ENST00000526553 OR8I2Q8N0Y5 310 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 OR2T10Q8NGZ9 312 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 OR10AG1Q8NH19 301 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 AQP10Q96PS8 301 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 LINC00470Q9BZP3 86 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 PRO1933Q9H354 126 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 ST20Q9HBF5 79 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 NPVFQ9HCQ7 196 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 MEGF8Q7Z7M0 2845 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 NBEAL2Q6ZNJ1 2754 aa1.68□□□□□ -2.14
CD44-223ENST00000526553 DOCK11Q5JSL3 2073 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 TRAV36DV7A0A075B6V5 113 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 ZNF736B4DX44 427 aaPredicted RBP1.67□□□□□ -2.14
CD44-223ENST00000526553 CDC42EP2O14613 210 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 HIST1H2BKO60814 126 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 CFDP00746 253 aaPredicted RBP1.67□□□□□ -2.14
CD44-223ENST00000526553 CRPP02741 224 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 HIST1H2BJP06899 126 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 SMIM13P0DJ93 91 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 MIFP14174 115 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 FKBP2P26885 142 aaKnown RBP1.67□□□□□ -2.14
CD44-223ENST00000526553 KRTAP12-1P59990 96 aa1.67□□□□□ -2.14
CD44-223ENST00000526553 RPS28P62857 69 aaKnown RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms