RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 ATP6V1G1O75348 118 aa7.23□□□□□ -1.25
NEDD8-204ENST00000526430 GAGE6Q13070 117 aa7.23□□□□□ -1.25
NEDD8-204ENST00000526430 C20orf203Q8NBC4 194 aa7.23□□□□□ -1.25
NEDD8-204ENST00000526430 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
NEDD8-204ENST00000526430 LAMTOR2Q9Y2Q5 125 aa7.23□□□□□ -1.25
NEDD8-204ENST00000526430 LINC01546A6NGU7 62 aa7.22□□□□□ -1.25
NEDD8-204ENST00000526430 TCAPO15273 167 aa7.22□□□□□ -1.25
NEDD8-204ENST00000526430 MT-ND6P03923 174 aa7.22□□□□□ -1.25
NEDD8-204ENST00000526430 AMTP48728 403 aa7.22□□□□□ -1.25
NEDD8-204ENST00000526430 RBX1P62877 108 aa7.22□□□□□ -1.25
NEDD8-204ENST00000526430 FABP9Q0Z7S8 132 aa7.22□□□□□ -1.25
NEDD8-204ENST00000526430 ENHOQ6UWT2 76 aa7.22□□□□□ -1.25
NEDD8-204ENST00000526430 NTN5Q8WTR8 489 aaPredicted RBP7.22□□□□□ -1.25
NEDD8-204ENST00000526430 TMEM243Q9BU79 118 aa7.22□□□□□ -1.25
NEDD8-204ENST00000526430 KRTAP9-2Q9BYQ4 174 aa7.22□□□□□ -1.25
NEDD8-204ENST00000526430 TRAPPC1Q9Y5R8 145 aa7.22□□□□□ -1.25
NEDD8-204ENST00000526430 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.21□□□□□ -1.26
NEDD8-204ENST00000526430 IGLV5-52A0A0A0MRZ9 124 aa7.21□□□□□ -1.26
NEDD8-204ENST00000526430 LOC389332A0A1B0GUA5 103 aa7.21□□□□□ -1.26
NEDD8-204ENST00000526430 A0A1B0GUV1 79 aa7.21□□□□□ -1.26
NEDD8-204ENST00000526430 IGKV2-29A2NJV5 120 aaPredicted RBP7.21□□□□□ -1.26
NEDD8-204ENST00000526430 K7EP13 123 aa7.21□□□□□ -1.26
NEDD8-204ENST00000526430 IFI27P40305 119 aaPredicted RBP7.21□□□□□ -1.26
NEDD8-204ENST00000526430 KRTAP10-4P60372 401 aaPredicted RBP7.21□□□□□ -1.26
NEDD8-204ENST00000526430 Q8N8P6 123 aa7.21□□□□□ -1.26
NEDD8-204ENST00000526430 CHCHD5Q9BSY4 110 aa7.21□□□□□ -1.26
NEDD8-204ENST00000526430 TMEM262E9PQX1 116 aa7.2□□□□□ -1.26
NEDD8-204ENST00000526430 KRTAP26-1Q6PEX3 210 aa7.2□□□□□ -1.26
NEDD8-204ENST00000526430 Q6ZSA8 131 aa7.2□□□□□ -1.26
NEDD8-204ENST00000526430 PRR34Q9NV39 138 aa7.2□□□□□ -1.26
NEDD8-204ENST00000526430 FAM30AQ9NZY2 134 aa7.2□□□□□ -1.26
NEDD8-204ENST00000526430 KLK12Q9UKR0 248 aa7.2□□□□□ -1.26
NEDD8-204ENST00000526430 H7C423 109 aa7.19□□□□□ -1.26
NEDD8-204ENST00000526430 FGF6P10767 208 aa7.19□□□□□ -1.26
NEDD8-204ENST00000526430 S100A1P23297 94 aa7.19□□□□□ -1.26
NEDD8-204ENST00000526430 MRPL52Q86TS9 123 aaKnown RBP7.19□□□□□ -1.26
NEDD8-204ENST00000526430 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.19□□□□□ -1.26
NEDD8-204ENST00000526430 C18orf32Q8TCD1 76 aa7.19□□□□□ -1.26
NEDD8-204ENST00000526430 TRAV9-2A0A087WT02 112 aa7.18□□□□□ -1.26
NEDD8-204ENST00000526430 TRGC2P03986 189 aa7.18□□□□□ -1.26
NEDD8-204ENST00000526430 RAB5AP20339 215 aa7.18□□□□□ -1.26
NEDD8-204ENST00000526430 RPL39P62891 51 aaKnown RBP7.18□□□□□ -1.26
NEDD8-204ENST00000526430 KIR2DL4Q99706 377 aa7.18□□□□□ -1.26
NEDD8-204ENST00000526430 MAP1LC3AQ9H492 121 aa7.18□□□□□ -1.26
NEDD8-204ENST00000526430 UBE2D4Q9Y2X8 147 aa7.18□□□□□ -1.26
NEDD8-204ENST00000526430 TNXBP22105 4242 aa7.18□□□□□ -1.26
NEDD8-204ENST00000526430 A0A087WX48 190 aa7.17□□□□□ -1.26
NEDD8-204ENST00000526430 LAGE3Q14657 143 aa7.17□□□□□ -1.26
NEDD8-204ENST00000526430 LINC00269Q8N2A0 174 aa7.17□□□□□ -1.26
NEDD8-204ENST00000526430 C10orf126Q8N4M7 172 aa7.17□□□□□ -1.26
NEDD8-204ENST00000526430 OPRPNQ99935 248 aaPredicted RBP7.17□□□□□ -1.26
NEDD8-204ENST00000526430 CDC42SE2Q9NRR3 84 aa7.17□□□□□ -1.26
NEDD8-204ENST00000526430 CSDC2Q9Y534 153 aaKnown RBP7.17□□□□□ -1.26
NEDD8-204ENST00000526430 A0A096LNJ9 63 aa7.16□□□□□ -1.26
NEDD8-204ENST00000526430 KRTAP9-6A0A140TA67 174 aa7.16□□□□□ -1.26
NEDD8-204ENST00000526430 FCER1GP30273 86 aa7.16□□□□□ -1.26
NEDD8-204ENST00000526430 LINC00310P59036 64 aa7.16□□□□□ -1.26
NEDD8-204ENST00000526430 TIMM21Q9BVV7 248 aa7.16□□□□□ -1.26
NEDD8-204ENST00000526430 NXT2Q9NPJ8 142 aaKnown RBP7.16□□□□□ -1.26
NEDD8-204ENST00000526430 LRCOL1A6NCL2 159 aa7.15□□□□□ -1.26
NEDD8-204ENST00000526430 ANGP03950 147 aaKnown RBP7.15□□□□□ -1.26
NEDD8-204ENST00000526430 UBE2WQ96B02 151 aa7.15□□□□□ -1.26
NEDD8-204ENST00000526430 IGIPA6NJ69 53 aa7.14□□□□□ -1.27
NEDD8-204ENST00000526430 K7EMI3 77 aa7.14□□□□□ -1.27
NEDD8-204ENST00000526430 UBE2L6O14933 153 aa7.14□□□□□ -1.27
NEDD8-204ENST00000526430 ZNF25P17030 456 aaPredicted RBP7.14□□□□□ -1.27
NEDD8-204ENST00000526430 PKIAP61925 76 aa7.14□□□□□ -1.27
NEDD8-204ENST00000526430 REG3AQ06141 175 aa7.14□□□□□ -1.27
NEDD8-204ENST00000526430 WFDC2Q14508 124 aa7.14□□□□□ -1.27
NEDD8-204ENST00000526430 CLPSL2Q6UWE3 100 aa7.14□□□□□ -1.27
NEDD8-204ENST00000526430 PRSS3P2Q8NHM4 247 aa7.14□□□□□ -1.27
NEDD8-204ENST00000526430 Q9HAA7 133 aa7.14□□□□□ -1.27
NEDD8-204ENST00000526430 TRAV8-3A0A0A6YYJ7 113 aa7.13□□□□□ -1.27
NEDD8-204ENST00000526430 NUPR1O60356 82 aa7.13□□□□□ -1.27
NEDD8-204ENST00000526430 MT1HL1P0DM35 61 aa7.13□□□□□ -1.27
NEDD8-204ENST00000526430 Q0VG73 95 aa7.13□□□□□ -1.27
NEDD8-204ENST00000526430 RNASE13Q5GAN3 156 aaKnown RBP7.13□□□□□ -1.27
NEDD8-204ENST00000526430 RNASEKQ6P5S7 137 aaKnown RBP7.13□□□□□ -1.27
NEDD8-204ENST00000526430 C2orf66Q6UXQ4 117 aa7.13□□□□□ -1.27
NEDD8-204ENST00000526430 ZNF664Q8N3J9 261 aa7.13□□□□□ -1.27
NEDD8-204ENST00000526430 PYGO1Q9Y3Y4 419 aa7.13□□□□□ -1.27
NEDD8-204ENST00000526430 LINC00614P0C842 121 aa7.12□□□□□ -1.27
NEDD8-204ENST00000526430 MRPS36P82909 103 aaKnown RBP7.12□□□□□ -1.27
NEDD8-204ENST00000526430 ORMDL2Q53FV1 153 aa7.12□□□□□ -1.27
NEDD8-204ENST00000526430 AMMECR1LQ6DCA0 310 aa7.12□□□□□ -1.27
NEDD8-204ENST00000526430 Q6ZUT4 128 aa7.12□□□□□ -1.27
NEDD8-204ENST00000526430 LINC00173Q6ZV60 143 aa7.12□□□□□ -1.27
NEDD8-204ENST00000526430 Q8N814 137 aa7.12□□□□□ -1.27
NEDD8-204ENST00000526430 OR5A1Q8NGJ0 315 aa7.12□□□□□ -1.27
NEDD8-204ENST00000526430 TOMM6Q96B49 74 aa7.12□□□□□ -1.27
NEDD8-204ENST00000526430 IGLV4-3A0A075B6K6 122 aa7.11□□□□□ -1.27
NEDD8-204ENST00000526430 LINC00959A0A1B0GUT2 108 aa7.11□□□□□ -1.27
NEDD8-204ENST00000526430 MIAQ16674 131 aa7.11□□□□□ -1.27
NEDD8-204ENST00000526430 ZC2HC1BQ5TFG8 222 aa7.11□□□□□ -1.27
NEDD8-204ENST00000526430 SPANXA1Q9NS26 97 aa7.11□□□□□ -1.27
NEDD8-204ENST00000526430 IGLV10-54A0A075B6I4 117 aa7.1□□□□□ -1.27
NEDD8-204ENST00000526430 HIST1H2BKO60814 126 aa7.1□□□□□ -1.27
NEDD8-204ENST00000526430 HIST1H2BJP06899 126 aa7.1□□□□□ -1.27
NEDD8-204ENST00000526430 HIST1H2BOP23527 126 aa7.1□□□□□ -1.27
NEDD8-204ENST00000526430 HIST1H2BBP33778 126 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms