RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 PLXND1Q9Y4D7 1925 aa6.95□□□□□ -1.3
CTNND1-213ENST00000526357 A8MZ25 164 aa6.94□□□□□ -1.3
CTNND1-213ENST00000526357 LINC00208Q96KT6 92 aa6.94□□□□□ -1.3
CTNND1-213ENST00000526357 ZNF843Q8N446 348 aa6.94□□□□□ -1.3
CTNND1-213ENST00000526357 LINC00526Q96FQ7 95 aa6.94□□□□□ -1.3
CTNND1-213ENST00000526357 NUPR2A6NF83 97 aa6.94□□□□□ -1.3
CTNND1-213ENST00000526357 LINC00694P0DN24 101 aa6.94□□□□□ -1.3
CTNND1-213ENST00000526357 PRORYQ9H606 182 aa6.94□□□□□ -1.3
CTNND1-213ENST00000526357 CELA1Q9UNI1 258 aa6.94□□□□□ -1.3
CTNND1-213ENST00000526357 REG3GQ6UW15 175 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 CIRBP-AS1Q8TBR5 109 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 TANC1Q9C0D5 1861 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 HELZP42694 1942 aaKnown RBP6.93□□□□□ -1.3
CTNND1-213ENST00000526357 LOC100131303A0A0U1RQF7 123 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 M0QXV9 152 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 NTM-AS1Q6ZSK4 140 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 PSMG3-AS1Q96PY0 264 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 ABCA4P78363 2273 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 POLEQ07864 2286 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 CRIP1P50238 77 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 MSMPQ1L6U9 139 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 Q6Q795 121 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 RLFQ13129 1914 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 MED12Q93074 2177 aa6.93□□□□□ -1.3
CTNND1-213ENST00000526357 IGHV6-1A0A0B4J1U7 121 aa6.92□□□□□ -1.3
CTNND1-213ENST00000526357 MRGPRG-AS1Q2M3A8 158 aa6.92□□□□□ -1.3
CTNND1-213ENST00000526357 C1orf137Q5JT78 98 aa6.92□□□□□ -1.3
CTNND1-213ENST00000526357 DOCK8Q8NF50 2099 aa6.92□□□□□ -1.3
CTNND1-213ENST00000526357 EP300Q09472 2414 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-213ENST00000526357 DOCK10Q96BY6 2186 aa6.91□□□□□ -1.3
CTNND1-213ENST00000526357 NRACQ8N912 160 aa6.91□□□□□ -1.3
CTNND1-213ENST00000526357 CYSRT1A8MQ03 144 aa6.91□□□□□ -1.3
CTNND1-213ENST00000526357 Q8NA96 180 aa6.91□□□□□ -1.3
CTNND1-213ENST00000526357 C19orf84I3L1E1 186 aa6.91□□□□□ -1.3
CTNND1-213ENST00000526357 ZNF702PQ9H963 129 aa6.9□□□□□ -1.3
CTNND1-213ENST00000526357 EGFEM1PQ0D2K5 195 aa6.9□□□□□ -1.3
CTNND1-213ENST00000526357 FRMPD3Q5JV73 1810 aa6.9□□□□□ -1.3
CTNND1-213ENST00000526357 LY6G6DO95868 133 aa6.9□□□□□ -1.31
CTNND1-213ENST00000526357 RNASE3P12724 160 aaKnown RBP6.9□□□□□ -1.31
CTNND1-213ENST00000526357 Q8N814 137 aa6.9□□□□□ -1.31
CTNND1-213ENST00000526357 DOCK7Q96N67 2140 aa6.9□□□□□ -1.31
CTNND1-213ENST00000526357 TRBV7-7A0A0K0K1E9 115 aa6.9□□□□□ -1.31
CTNND1-213ENST00000526357 SOSTDC1Q6X4U4 206 aa6.89□□□□□ -1.31
CTNND1-213ENST00000526357 POM121L12Q8N7R1 296 aa6.89□□□□□ -1.31
CTNND1-213ENST00000526357 RETNLBQ9BQ08 111 aa6.89□□□□□ -1.31
CTNND1-213ENST00000526357 CDC42SE2Q9NRR3 84 aa6.89□□□□□ -1.31
CTNND1-213ENST00000526357 NANOS2P60321 138 aaKnown RBP6.89□□□□□ -1.31
CTNND1-213ENST00000526357 FSHBP01225 129 aa6.89□□□□□ -1.31
CTNND1-213ENST00000526357 SPTBN1Q01082 2364 aaKnown RBP6.88□□□□□ -1.31
CTNND1-213ENST00000526357 XGP55808 180 aa6.88□□□□□ -1.31
CTNND1-213ENST00000526357 ZDBF2Q9HCK1 2354 aa6.88□□□□□ -1.31
CTNND1-213ENST00000526357 DIDO1Q9BTC0 2240 aaKnown RBP6.88□□□□□ -1.31
CTNND1-213ENST00000526357 IGLV5-52A0A0A0MRZ9 124 aa6.88□□□□□ -1.31
CTNND1-213ENST00000526357 EIF4EBP1Q13541 118 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-213ENST00000526357 SPINK1P00995 79 aa6.88□□□□□ -1.31
CTNND1-213ENST00000526357 BRWD1-AS2P59051 145 aa6.88□□□□□ -1.31
CTNND1-213ENST00000526357 KLLNB2CW77 178 aa6.88□□□□□ -1.31
CTNND1-213ENST00000526357 LINC01547P58512 204 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-213ENST00000526357 F8WDY8 70 aa6.88□□□□□ -1.31
CTNND1-213ENST00000526357 CHCHD7Q9BUK0 85 aa6.88□□□□□ -1.31
CTNND1-213ENST00000526357 OBSL1O75147 1896 aa6.87□□□□□ -1.31
CTNND1-213ENST00000526357 IGLV2-11P01706 119 aa6.87□□□□□ -1.31
CTNND1-213ENST00000526357 POLR2KP53803 58 aaKnown RBP6.87□□□□□ -1.31
CTNND1-213ENST00000526357 H0Y9P7 68 aa6.87□□□□□ -1.31
CTNND1-213ENST00000526357 PCOTHQ58A44 107 aa6.87□□□□□ -1.31
CTNND1-213ENST00000526357 C2orf91Q6ZV80 131 aa6.87□□□□□ -1.31
CTNND1-213ENST00000526357 CADP27708 2225 aa6.87□□□□□ -1.31
CTNND1-213ENST00000526357 USF3Q68DE3 2245 aa6.87□□□□□ -1.31
CTNND1-213ENST00000526357 Q6ZS46 218 aa6.87□□□□□ -1.31
CTNND1-213ENST00000526357 DOPEY2Q9Y3R5 2298 aa6.87□□□□□ -1.31
CTNND1-213ENST00000526357 C1orf229Q6ZS94 237 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-213ENST00000526357 NUP210Q8TEM1 1887 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-213ENST00000526357 C10orf99Q6UWK7 81 aa6.86□□□□□ -1.31
CTNND1-213ENST00000526357 Q9BRP9 147 aa6.86□□□□□ -1.31
CTNND1-213ENST00000526357 CACNA1EQ15878 2313 aa6.86□□□□□ -1.31
CTNND1-213ENST00000526357 BEAN1Q3B7T3 259 aa6.86□□□□□ -1.31
CTNND1-213ENST00000526357 LINC01006Q8NI28 216 aa6.86□□□□□ -1.31
CTNND1-213ENST00000526357 DYSFO75923 2080 aa6.85□□□□□ -1.31
CTNND1-213ENST00000526357 TRBV10-3A0A0K0K1G6 114 aa6.85□□□□□ -1.31
CTNND1-213ENST00000526357 LIMD2Q9BT23 127 aa6.85□□□□□ -1.31
CTNND1-213ENST00000526357 A0A1W2PNU3 283 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-213ENST00000526357 C6orf223Q8N319 242 aa6.85□□□□□ -1.31
CTNND1-213ENST00000526357 CSDC2Q9Y534 153 aaKnown RBP6.85□□□□□ -1.31
CTNND1-213ENST00000526357 PSPHP1O15172 72 aa6.85□□□□□ -1.31
CTNND1-213ENST00000526357 PRR9Q5T870 116 aa6.84□□□□□ -1.31
CTNND1-213ENST00000526357 C11orf71Q6IPW1 123 aa6.84□□□□□ -1.31
CTNND1-213ENST00000526357 UNQ6190/PRO20217Q6UXQ8 127 aa6.84□□□□□ -1.31
CTNND1-213ENST00000526357 ZNF295-AS1Q8N0V1 137 aa6.84□□□□□ -1.31
CTNND1-213ENST00000526357 hDV103S1A0JD37 113 aa6.84□□□□□ -1.31
CTNND1-213ENST00000526357 TRIOBPQ9H2D6 2365 aa6.83□□□□□ -1.32
CTNND1-213ENST00000526357 IGLV1-40P01703 118 aa6.83□□□□□ -1.32
CTNND1-213ENST00000526357 LINC01556Q5JQF7 62 aa6.83□□□□□ -1.32
CTNND1-213ENST00000526357 ABCA1O95477 2261 aa6.83□□□□□ -1.32
CTNND1-213ENST00000526357 CEP290O15078 2479 aa6.83□□□□□ -1.32
CTNND1-213ENST00000526357 TMEM131Q92545 1883 aa6.83□□□□□ -1.32
CTNND1-213ENST00000526357 PLA2G5P39877 138 aa6.83□□□□□ -1.32
CTNND1-213ENST00000526357 Q8N6K4 173 aa6.83□□□□□ -1.32
CTNND1-213ENST00000526357 CRYGAP11844 174 aa6.82□□□□□ -1.32
CTNND1-213ENST00000526357 A0A087WYN8 130 aa6.82□□□□□ -1.32
CTNND1-213ENST00000526357 LINC00242Q5T6M2 205 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms