RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 MRPL54Q6P161 138 aaKnown RBP3.08□□□□□ -1.92
USP48-211ENST00000526044 RASL11AQ6T310 242 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 ZFP2Q6ZN57 461 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 ATP5L2Q7Z4Y8 100 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 CNFNQ9BYD5 112 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 SAMD10Q9BYL1 202 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 TMEM191AQ9H0A3 160 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 EDA2RQ9HAV5 297 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 PRR34Q9NV39 138 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 HHLA3Q9XRX5 114 aa3.08□□□□□ -1.92
USP48-211ENST00000526044 NACAE9PAV3 2078 aa3.07□□□□□ -1.92
USP48-211ENST00000526044 TRBV24-1A0A075B6N3 115 aa3.07□□□□□ -1.92
USP48-211ENST00000526044 DEFB131BA0A096LNP1 70 aa3.07□□□□□ -1.92
USP48-211ENST00000526044 TRAV10A0A0B4J240 114 aa3.07□□□□□ -1.92
USP48-211ENST00000526044 CRYBA4P53673 196 aa3.07□□□□□ -1.92
USP48-211ENST00000526044 HBBP68871 147 aa3.07□□□□□ -1.92
USP48-211ENST00000526044 LINC00242Q5T6M2 205 aa3.07□□□□□ -1.92
USP48-211ENST00000526044 FAM74A4Q5TZK3 123 aa3.07□□□□□ -1.92
USP48-211ENST00000526044 FAM210BQ96KR6 192 aa3.07□□□□□ -1.92
USP48-211ENST00000526044 AP1S3Q96PC3 154 aa3.07□□□□□ -1.92
USP48-211ENST00000526044 DPH3P1Q9H4G8 78 aa3.07□□□□□ -1.92
USP48-211ENST00000526044 PRO0255Q9UI72 69 aa3.07□□□□□ -1.92
USP48-211ENST00000526044 KIF25-AS1Q9Y6Z4 181 aa3.07□□□□□ -1.92
USP48-211ENST00000526044 A0A1B0GWB2 263 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 TRBV6-4A0A1B0GX49 114 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 A0A1B0GXF2 115 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 COLCA2A8K830 154 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 H7C1H1 209 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 SCO1O75880 301 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 MGPP08493 103 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 LINC00315P59091 139 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 RPL18AQ02543 176 aaKnown RBP3.06□□□□□ -1.92
USP48-211ENST00000526044 ZNF56Q15929 161 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 MGAM2Q2M2H8 2515 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 FAM104BQ5XKR9 115 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 UFSP1Q6NVU6 142 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 FAM19A5Q7Z5A7 132 aaPredicted RBP3.06□□□□□ -1.92
USP48-211ENST00000526044 AMN1Q8IY45 258 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 SLC25A29Q8N8R3 303 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 GATD1Q8NB37 220 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 FRZBQ92765 325 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 PRADC1Q9BSG0 188 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 GNB1LQ9BYB4 327 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 MAP1LC3AQ9H492 121 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 TRAPPC1Q9Y5R8 145 aa3.06□□□□□ -1.92
USP48-211ENST00000526044 NBEAL2Q6ZNJ1 2754 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 NOTCH1P46531 2555 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 A0A0J9YY99 117 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 A0A1B0GV72 72 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 RPL37AP8A6NKH3 93 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 IGLL5B9A064 214 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 H3BNG1 76 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 M0QY20 66 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 PPP1R17O96001 155 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 HLA-DQA1P01909 254 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 APCSP02743 223 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 PPBPP02775 128 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 RAB5AP20339 215 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 CKS2P33552 79 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 RPS10P46783 165 aaKnown RBP3.05□□□□□ -1.92
USP48-211ENST00000526044 HNRNPA3P51991 378 aaKnown RBP3.05□□□□□ -1.92
USP48-211ENST00000526044 FABP9Q0Z7S8 132 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 RHOHQ15669 191 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 MRPL51Q4U2R6 128 aaKnown RBP3.05□□□□□ -1.92
USP48-211ENST00000526044 CEMP1Q6PRD7 247 aaPredicted RBP3.05□□□□□ -1.92
USP48-211ENST00000526044 TMEM136Q6ZRR5 245 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 ZNRF2Q8NHG8 242 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 MRAP2Q96G30 205 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 RNF185Q96GF1 192 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 VSIG2Q96IQ7 327 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 DNAJC30Q96LL9 226 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 YPEL4Q96NS1 127 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 NIT2Q9NQR4 276 aa3.05□□□□□ -1.92
USP48-211ENST00000526044 KLK5Q9Y337 293 aaPredicted RBP3.05□□□□□ -1.92
USP48-211ENST00000526044 NBEAL1Q6ZS30 2694 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 TRBV7-3A0A075B6L6 115 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 TRAV26-2A0A0B4J265 109 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 TRBV10-1A0A0K0K1A3 114 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 FAM240AA0A1B0GVK7 77 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 NUPR2A6NF83 97 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 E9PLD3 99 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 PHOX2AO14813 284 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 MT-ND6P03923 174 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 REG3GQ6UW15 175 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 ORMDL3Q8N138 153 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 MUC7Q8TAX7 377 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 PRELID3AQ96N28 172 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 KIR2DL4Q99706 377 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 ICOSQ9Y6W8 199 aa3.04□□□□□ -1.92
USP48-211ENST00000526044 A0A096LPF7 62 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 D6R8Y8 96 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 TRGC2P03986 189 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 P0DMU3 169 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 FAM231AP0DMU4 169 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 FAM231CP0DMU5 169 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 TCTAP57738 103 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 RPL32P62910 135 aaKnown RBP3.03□□□□□ -1.92
USP48-211ENST00000526044 SMAGPQ0VAQ4 97 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 ZFAND6Q6FIF0 208 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 Q6ZN92 141 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms