RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 UBE2WQ96B02 151 aa8.26□□□□□ -1.09
SMCO4-202ENST00000525141 RMI2Q96E14 147 aa8.26□□□□□ -1.09
SMCO4-202ENST00000525141 KIR2DL4Q99706 377 aa8.26□□□□□ -1.09
SMCO4-202ENST00000525141 PRR34Q9NV39 138 aa8.26□□□□□ -1.09
SMCO4-202ENST00000525141 LAMTOR2Q9Y2Q5 125 aa8.26□□□□□ -1.09
SMCO4-202ENST00000525141 PRSS47A8MTI9 375 aa8.25□□□□□ -1.09
SMCO4-202ENST00000525141 TCAPO15273 167 aa8.25□□□□□ -1.09
SMCO4-202ENST00000525141 ENHOQ6UWT2 76 aa8.25□□□□□ -1.09
SMCO4-202ENST00000525141 SLC7A5P1Q8MH63 180 aa8.25□□□□□ -1.09
SMCO4-202ENST00000525141 BAALCQ8WXS3 180 aa8.25□□□□□ -1.09
SMCO4-202ENST00000525141 PRELID3AQ96N28 172 aa8.25□□□□□ -1.09
SMCO4-202ENST00000525141 GNB1LQ9BYB4 327 aa8.25□□□□□ -1.09
SMCO4-202ENST00000525141 HERC1Q15751 4861 aa8.25□□□□□ -1.09
SMCO4-202ENST00000525141 LECT2O14960 151 aa8.24□□□□□ -1.09
SMCO4-202ENST00000525141 NPYP01303 97 aa8.24□□□□□ -1.09
SMCO4-202ENST00000525141 FCER1GP30273 86 aa8.24□□□□□ -1.09
SMCO4-202ENST00000525141 MIAQ16674 131 aa8.24□□□□□ -1.09
SMCO4-202ENST00000525141 C20orf203Q8NBC4 194 aa8.24□□□□□ -1.09
SMCO4-202ENST00000525141 IGLV4-60A0A075B6I1 120 aa8.23□□□□□ -1.09
SMCO4-202ENST00000525141 HLA-DQA1P01909 254 aa8.23□□□□□ -1.09
SMCO4-202ENST00000525141 CRPP02741 224 aa8.23□□□□□ -1.09
SMCO4-202ENST00000525141 INAFM2P0DMQ5 153 aa8.23□□□□□ -1.09
SMCO4-202ENST00000525141 ZNF25P17030 456 aaPredicted RBP8.23□□□□□ -1.09
SMCO4-202ENST00000525141 Q5VSD8 79 aa8.23□□□□□ -1.09
SMCO4-202ENST00000525141 LINC00269Q8N2A0 174 aa8.23□□□□□ -1.09
SMCO4-202ENST00000525141 SMIM2Q9BVW6 85 aa8.23□□□□□ -1.09
SMCO4-202ENST00000525141 IGKV2D-24A0A075B6R9 120 aa8.22□□□□□ -1.09
SMCO4-202ENST00000525141 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.22□□□□□ -1.09
SMCO4-202ENST00000525141 IGKV2-29A2NJV5 120 aaPredicted RBP8.22□□□□□ -1.09
SMCO4-202ENST00000525141 FGF6P10767 208 aa8.22□□□□□ -1.09
SMCO4-202ENST00000525141 REG3AQ06141 175 aa8.22□□□□□ -1.09
SMCO4-202ENST00000525141 AMMECR1LQ6DCA0 310 aa8.22□□□□□ -1.09
SMCO4-202ENST00000525141 MRPL52Q86TS9 123 aaKnown RBP8.22□□□□□ -1.09
SMCO4-202ENST00000525141 FLG2Q5D862 2391 aaPredicted RBP8.21□□□□□ -1.09
SMCO4-202ENST00000525141 TRAV8-4A0A0B4J246 113 aa8.21□□□□□ -1.1
SMCO4-202ENST00000525141 MT-ND6P03923 174 aa8.21□□□□□ -1.1
SMCO4-202ENST00000525141 SMAGPQ0VAQ4 97 aa8.21□□□□□ -1.1
SMCO4-202ENST00000525141 LINC01620Q4KN68 170 aa8.21□□□□□ -1.1
SMCO4-202ENST00000525141 RNASEKQ6P5S7 137 aaKnown RBP8.21□□□□□ -1.1
SMCO4-202ENST00000525141 TMEM18Q96B42 140 aa8.21□□□□□ -1.1
SMCO4-202ENST00000525141 C1orf43Q9BWL3 253 aa8.21□□□□□ -1.1
SMCO4-202ENST00000525141 CSDC2Q9Y534 153 aaKnown RBP8.21□□□□□ -1.1
SMCO4-202ENST00000525141 Q6ZSA8 131 aa8.2□□□□□ -1.1
SMCO4-202ENST00000525141 TMEM101Q96IK0 257 aa8.2□□□□□ -1.1
SMCO4-202ENST00000525141 MAP1LC3AQ9H492 121 aa8.2□□□□□ -1.1
SMCO4-202ENST00000525141 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.19□□□□□ -1.1
SMCO4-202ENST00000525141 K7EMI3 77 aa8.19□□□□□ -1.1
SMCO4-202ENST00000525141 RAB5AP20339 215 aa8.19□□□□□ -1.1
SMCO4-202ENST00000525141 OR5A1Q8NGJ0 315 aa8.19□□□□□ -1.1
SMCO4-202ENST00000525141 TIMM21Q9BVV7 248 aa8.19□□□□□ -1.1
SMCO4-202ENST00000525141 TGIF2-C20orf24A0A0A6YYL0 155 aa8.18□□□□□ -1.1
SMCO4-202ENST00000525141 LOC389332A0A1B0GUA5 103 aa8.18□□□□□ -1.1
SMCO4-202ENST00000525141 KIAA1644Q3SXP7 199 aa8.18□□□□□ -1.1
SMCO4-202ENST00000525141 DGAT2L7PQ6IED9 249 aa8.18□□□□□ -1.1
SMCO4-202ENST00000525141 KRTAP26-1Q6PEX3 210 aa8.18□□□□□ -1.1
SMCO4-202ENST00000525141 CLPSL2Q6UWE3 100 aa8.18□□□□□ -1.1
SMCO4-202ENST00000525141 Q8N8P6 123 aa8.18□□□□□ -1.1
SMCO4-202ENST00000525141 KRTAP4-8Q9BYQ9 185 aa8.18□□□□□ -1.1
SMCO4-202ENST00000525141 CDC42SE2Q9NRR3 84 aa8.18□□□□□ -1.1
SMCO4-202ENST00000525141 MYCBP2O75592 4640 aa8.18□□□□□ -1.1
SMCO4-202ENST00000525141 ZNF664Q8N3J9 261 aa8.17□□□□□ -1.1
SMCO4-202ENST00000525141 YPEL4Q96NS1 127 aa8.17□□□□□ -1.1
SMCO4-202ENST00000525141 ALKBH7Q9BT30 221 aaPredicted RBP8.17□□□□□ -1.1
SMCO4-202ENST00000525141 MRPL18Q9H0U6 180 aaKnown RBP8.17□□□□□ -1.1
SMCO4-202ENST00000525141 NXT2Q9NPJ8 142 aaKnown RBP8.17□□□□□ -1.1
SMCO4-202ENST00000525141 UBE2D4Q9Y2X8 147 aa8.17□□□□□ -1.1
SMCO4-202ENST00000525141 FABP9Q0Z7S8 132 aa8.16□□□□□ -1.1
SMCO4-202ENST00000525141 SMCO4Q9NRQ5 59 aa8.16□□□□□ -1.1
SMCO4-202ENST00000525141 IGLV10-54A0A075B6I4 117 aa8.15□□□□□ -1.1
SMCO4-202ENST00000525141 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
SMCO4-202ENST00000525141 IFI27P40305 119 aaPredicted RBP8.15□□□□□ -1.1
SMCO4-202ENST00000525141 ORMDL2Q53FV1 153 aa8.15□□□□□ -1.1
SMCO4-202ENST00000525141 SPANXA1Q9NS26 97 aa8.15□□□□□ -1.1
SMCO4-202ENST00000525141 TRAPPC1Q9Y5R8 145 aa8.15□□□□□ -1.1
SMCO4-202ENST00000525141 CCL25O15444 150 aa8.14□□□□□ -1.11
SMCO4-202ENST00000525141 G0S2P27469 103 aa8.14□□□□□ -1.11
SMCO4-202ENST00000525141 RPL39P62891 51 aaKnown RBP8.14□□□□□ -1.11
SMCO4-202ENST00000525141 PYGO1Q9Y3Y4 419 aa8.14□□□□□ -1.11
SMCO4-202ENST00000525141 LINC00959A0A1B0GUT2 108 aa8.13□□□□□ -1.11
SMCO4-202ENST00000525141 LINC01546A6NGU7 62 aa8.13□□□□□ -1.11
SMCO4-202ENST00000525141 MRPS36P82909 103 aaKnown RBP8.13□□□□□ -1.11
SMCO4-202ENST00000525141 C14orf177Q52M58 125 aa8.13□□□□□ -1.11
SMCO4-202ENST00000525141 PRSS3P2Q8NHM4 247 aa8.13□□□□□ -1.11
SMCO4-202ENST00000525141 IGKV3OR2-268A0A0C4DH90 116 aa8.12□□□□□ -1.11
SMCO4-202ENST00000525141 A6NJY4 79 aa8.12□□□□□ -1.11
SMCO4-202ENST00000525141 KRTAP10-4P60372 401 aaPredicted RBP8.12□□□□□ -1.11
SMCO4-202ENST00000525141 SS18Q15532 418 aa8.12□□□□□ -1.11
SMCO4-202ENST00000525141 CBLN2Q8IUK8 224 aa8.12□□□□□ -1.11
SMCO4-202ENST00000525141 CHCHD10Q8WYQ3 142 aaPredicted RBP8.12□□□□□ -1.11
SMCO4-202ENST00000525141 FAM104AQ969W3 186 aa8.12□□□□□ -1.11
SMCO4-202ENST00000525141 CYSLTR1Q9Y271 337 aa8.12□□□□□ -1.11
SMCO4-202ENST00000525141 DMBT1Q9UGM3 2413 aaPredicted RBP8.12□□□□□ -1.11
SMCO4-202ENST00000525141 C1orf196B1AJZ1 125 aa8.11□□□□□ -1.11
SMCO4-202ENST00000525141 USP17L23D6RBM5 183 aa8.11□□□□□ -1.11
SMCO4-202ENST00000525141 PRSS1P07477 247 aa8.11□□□□□ -1.11
SMCO4-202ENST00000525141 C2orf66Q6UXQ4 117 aa8.11□□□□□ -1.11
SMCO4-202ENST00000525141 SCXQ7RTU7 201 aa8.11□□□□□ -1.11
SMCO4-202ENST00000525141 GAGE12HA6NDE8 117 aa8.1□□□□□ -1.11
SMCO4-202ENST00000525141 LINC01549A6NIU2 74 aa8.1□□□□□ -1.11
SMCO4-202ENST00000525141 NPSP0C0P6 89 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms