RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 SLPIP03973 132 aa8.28□□□□□ -1.08
TRAPPC4-205ENST00000525079 XCL1P47992 114 aa8.28□□□□□ -1.08
TRAPPC4-205ENST00000525079 HIGD2BQ4VC39 106 aa8.28□□□□□ -1.08
TRAPPC4-205ENST00000525079 CLLU1Q5K131 121 aa8.28□□□□□ -1.08
TRAPPC4-205ENST00000525079 C15orf56Q8N910 161 aa8.28□□□□□ -1.08
TRAPPC4-205ENST00000525079 KIR2DL4Q99706 377 aa8.28□□□□□ -1.08
TRAPPC4-205ENST00000525079 AP5S1Q9NUS5 200 aa8.28□□□□□ -1.08
TRAPPC4-205ENST00000525079 LINC00959A0A1B0GUT2 108 aa8.27□□□□□ -1.09
TRAPPC4-205ENST00000525079 LINC00862A6NCI5 91 aa8.27□□□□□ -1.09
TRAPPC4-205ENST00000525079 D6R8Y8 96 aa8.27□□□□□ -1.09
TRAPPC4-205ENST00000525079 F8W036 122 aa8.27□□□□□ -1.09
TRAPPC4-205ENST00000525079 CCL25O15444 150 aa8.27□□□□□ -1.09
TRAPPC4-205ENST00000525079 S100A8P05109 93 aa8.27□□□□□ -1.09
TRAPPC4-205ENST00000525079 IFITM2Q01629 132 aa8.27□□□□□ -1.09
TRAPPC4-205ENST00000525079 FOXI1Q12951 378 aa8.27□□□□□ -1.09
TRAPPC4-205ENST00000525079 MRPL52Q86TS9 123 aaKnown RBP8.27□□□□□ -1.09
TRAPPC4-205ENST00000525079 ZNF664Q8N3J9 261 aa8.27□□□□□ -1.09
TRAPPC4-205ENST00000525079 CDC42SE2Q9NRR3 84 aa8.27□□□□□ -1.09
TRAPPC4-205ENST00000525079 VPS13BQ7Z7G8 4022 aa8.27□□□□□ -1.09
TRAPPC4-205ENST00000525079 PANO1I0J062 215 aa8.26□□□□□ -1.09
TRAPPC4-205ENST00000525079 NPYP01303 97 aa8.26□□□□□ -1.09
TRAPPC4-205ENST00000525079 CNBPP62633 177 aaKnown RBP8.26□□□□□ -1.09
TRAPPC4-205ENST00000525079 PNRC1Q12796 327 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC4-205ENST00000525079 RNASE13Q5GAN3 156 aaKnown RBP8.26□□□□□ -1.09
TRAPPC4-205ENST00000525079 CFAP161Q6P656 301 aa8.26□□□□□ -1.09
TRAPPC4-205ENST00000525079 SDIM1Q6ZPB5 146 aa8.26□□□□□ -1.09
TRAPPC4-205ENST00000525079 C20orf78Q9BR46 151 aa8.26□□□□□ -1.09
TRAPPC4-205ENST00000525079 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC4-205ENST00000525079 SRRM2Q9UQ35 2752 aaKnown RBP8.26□□□□□ -1.09
TRAPPC4-205ENST00000525079 TRBV24-1A0A075B6N3 115 aa8.25□□□□□ -1.09
TRAPPC4-205ENST00000525079 MT-ND4LP03901 98 aa8.25□□□□□ -1.09
TRAPPC4-205ENST00000525079 PLA2G1BP04054 148 aaKnown RBP8.25□□□□□ -1.09
TRAPPC4-205ENST00000525079 SS18Q15532 418 aa8.25□□□□□ -1.09
TRAPPC4-205ENST00000525079 ANAPC16Q96DE5 110 aa8.25□□□□□ -1.09
TRAPPC4-205ENST00000525079 UBE2D4Q9Y2X8 147 aa8.25□□□□□ -1.09
TRAPPC4-205ENST00000525079 IGHV3-64A0A075B6Q5 118 aa8.24□□□□□ -1.09
TRAPPC4-205ENST00000525079 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC4-205ENST00000525079 TCAPO15273 167 aa8.24□□□□□ -1.09
TRAPPC4-205ENST00000525079 ATP5L2Q7Z4Y8 100 aa8.24□□□□□ -1.09
TRAPPC4-205ENST00000525079 SMIM2Q9BVW6 85 aa8.24□□□□□ -1.09
TRAPPC4-205ENST00000525079 RPL39P62891 51 aaKnown RBP8.23□□□□□ -1.09
TRAPPC4-205ENST00000525079 RPL32P62910 135 aaKnown RBP8.23□□□□□ -1.09
TRAPPC4-205ENST00000525079 TMEM136Q6ZRR5 245 aa8.23□□□□□ -1.09
TRAPPC4-205ENST00000525079 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
TRAPPC4-205ENST00000525079 PRELID3AQ96N28 172 aa8.23□□□□□ -1.09
TRAPPC4-205ENST00000525079 PPBPP02775 128 aa8.22□□□□□ -1.09
TRAPPC4-205ENST00000525079 CHTF8P0CG12 524 aa8.22□□□□□ -1.09
TRAPPC4-205ENST00000525079 ADCYAP1P18509 176 aa8.22□□□□□ -1.09
TRAPPC4-205ENST00000525079 Q6ZUT4 128 aa8.22□□□□□ -1.09
TRAPPC4-205ENST00000525079 ORMDL3Q8N138 153 aa8.22□□□□□ -1.09
TRAPPC4-205ENST00000525079 TMEM18Q96B42 140 aa8.22□□□□□ -1.09
TRAPPC4-205ENST00000525079 DPH3Q96FX2 82 aa8.22□□□□□ -1.09
TRAPPC4-205ENST00000525079 GVQW2A0A096LPI5 108 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC4-205ENST00000525079 TRAV13-1A0A0B4J241 112 aa8.21□□□□□ -1.1
TRAPPC4-205ENST00000525079 SMAGPQ0VAQ4 97 aa8.21□□□□□ -1.1
TRAPPC4-205ENST00000525079 CD164L2Q6UWJ8 174 aa8.21□□□□□ -1.1
TRAPPC4-205ENST00000525079 OPRPNQ99935 248 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC4-205ENST00000525079 CSDC2Q9Y534 153 aaKnown RBP8.21□□□□□ -1.1
TRAPPC4-205ENST00000525079 IGHV1-58A0A0C4DH39 117 aa8.2□□□□□ -1.1
TRAPPC4-205ENST00000525079 LOC389332A0A1B0GUA5 103 aa8.2□□□□□ -1.1
TRAPPC4-205ENST00000525079 TMEM218A2RU14 115 aa8.2□□□□□ -1.1
TRAPPC4-205ENST00000525079 PHOX2AO14813 284 aa8.2□□□□□ -1.1
TRAPPC4-205ENST00000525079 COX6A2Q02221 97 aa8.2□□□□□ -1.1
TRAPPC4-205ENST00000525079 TIMM21Q9BVV7 248 aa8.2□□□□□ -1.1
TRAPPC4-205ENST00000525079 C1orf196B1AJZ1 125 aa8.19□□□□□ -1.1
TRAPPC4-205ENST00000525079 KRTAP10-4P60372 401 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC4-205ENST00000525079 UQCC3Q6UW78 93 aa8.19□□□□□ -1.1
TRAPPC4-205ENST00000525079 PRSS3P2Q8NHM4 247 aa8.19□□□□□ -1.1
TRAPPC4-205ENST00000525079 FAM104AQ969W3 186 aa8.19□□□□□ -1.1
TRAPPC4-205ENST00000525079 RAB5AP20339 215 aa8.18□□□□□ -1.1
TRAPPC4-205ENST00000525079 MALP21145 153 aa8.18□□□□□ -1.1
TRAPPC4-205ENST00000525079 CIRBPQ14011 172 aaKnown RBP8.18□□□□□ -1.1
TRAPPC4-205ENST00000525079 C5orf38Q86SI9 138 aa8.18□□□□□ -1.1
TRAPPC4-205ENST00000525079 COMMD7Q86VX2 200 aa8.18□□□□□ -1.1
TRAPPC4-205ENST00000525079 FLG2Q5D862 2391 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC4-205ENST00000525079 A0A087WYN8 130 aa8.17□□□□□ -1.1
TRAPPC4-205ENST00000525079 IGKV2-24A0A0C4DH68 120 aa8.17□□□□□ -1.1
TRAPPC4-205ENST00000525079 ZNF561-AS1K7EIQ3 104 aa8.17□□□□□ -1.1
TRAPPC4-205ENST00000525079 COX7A2LO14548 114 aa8.17□□□□□ -1.1
TRAPPC4-205ENST00000525079 RPL37AP61513 92 aaKnown RBP8.17□□□□□ -1.1
TRAPPC4-205ENST00000525079 MAP1LC3AQ9H492 121 aa8.17□□□□□ -1.1
TRAPPC4-205ENST00000525079 SPACA4Q8TDM5 124 aa8.16□□□□□ -1.1
TRAPPC4-205ENST00000525079 CARD19Q96LW7 228 aa8.16□□□□□ -1.1
TRAPPC4-205ENST00000525079 SPANXA1Q9NS26 97 aa8.16□□□□□ -1.1
TRAPPC4-205ENST00000525079 IGLV4-69A0A075B6H9 119 aa8.15□□□□□ -1.1
TRAPPC4-205ENST00000525079 PRSS47A8MTI9 375 aa8.15□□□□□ -1.1
TRAPPC4-205ENST00000525079 SYCNQ0VAF6 134 aa8.15□□□□□ -1.1
TRAPPC4-205ENST00000525079 MAJINQ3KP22 176 aa8.15□□□□□ -1.1
TRAPPC4-205ENST00000525079 Q8N8P6 123 aa8.15□□□□□ -1.1
TRAPPC4-205ENST00000525079 IMMP2LQ96T52 175 aa8.15□□□□□ -1.1
TRAPPC4-205ENST00000525079 SEC11CQ9BY50 192 aa8.15□□□□□ -1.1
TRAPPC4-205ENST00000525079 CTDSP1Q9GZU7 261 aa8.15□□□□□ -1.1
TRAPPC4-205ENST00000525079 LAMTOR2Q9Y2Q5 125 aa8.15□□□□□ -1.1
TRAPPC4-205ENST00000525079 A0A096LNI7 61 aa8.14□□□□□ -1.11
TRAPPC4-205ENST00000525079 IFITM10A6NMD0 228 aa8.14□□□□□ -1.11
TRAPPC4-205ENST00000525079 MRPS36P82909 103 aaKnown RBP8.14□□□□□ -1.11
TRAPPC4-205ENST00000525079 KIAA1644Q3SXP7 199 aa8.14□□□□□ -1.11
TRAPPC4-205ENST00000525079 J3QL48 77 aa8.13□□□□□ -1.11
TRAPPC4-205ENST00000525079 IFI27P40305 119 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC4-205ENST00000525079 HNRNPA3P51991 378 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms