RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 RBMY1DP0C7P1 496 aaKnown RBP9.57□□□□□ -0.88
CAPN1-202ENST00000524773 PSMB8P28062 276 aa9.57□□□□□ -0.88
CAPN1-202ENST00000524773 DEFB112Q30KQ8 113 aa9.57□□□□□ -0.88
CAPN1-202ENST00000524773 TMEM61Q8N0U2 210 aa9.57□□□□□ -0.88
CAPN1-202ENST00000524773 BBC3Q96PG8 261 aaPredicted RBP9.57□□□□□ -0.88
CAPN1-202ENST00000524773 TRGV11A0A075B6L2 103 aa9.56□□□□□ -0.88
CAPN1-202ENST00000524773 K7EMT4 169 aa9.56□□□□□ -0.88
CAPN1-202ENST00000524773 ATP5J2P56134 94 aa9.56□□□□□ -0.88
CAPN1-202ENST00000524773 UBE2D4Q9Y2X8 147 aa9.56□□□□□ -0.88
CAPN1-202ENST00000524773 SLURP1P55000 103 aa9.56□□□□□ -0.88
CAPN1-202ENST00000524773 CITED2Q99967 270 aaPredicted RBP9.56□□□□□ -0.88
CAPN1-202ENST00000524773 ZNF469Q96JG9 3925 aaPredicted RBP9.55□□□□□ -0.88
CAPN1-202ENST00000524773 PIMREGQ9BSJ6 248 aa9.55□□□□□ -0.88
CAPN1-202ENST00000524773 HOXD3P31249 432 aaPredicted RBP9.55□□□□□ -0.88
CAPN1-202ENST00000524773 ANKRD17O75179 2603 aaKnown RBP9.55□□□□□ -0.88
CAPN1-202ENST00000524773 IGHV3-53P01767 116 aa9.54□□□□□ -0.88
CAPN1-202ENST00000524773 COX6CP09669 75 aa9.54□□□□□ -0.88
CAPN1-202ENST00000524773 NAV2Q8IVL1 2488 aa9.54□□□□□ -0.88
CAPN1-202ENST00000524773 CCL19Q99731 98 aa9.54□□□□□ -0.88
CAPN1-202ENST00000524773 Q9H8V8 135 aa9.54□□□□□ -0.88
CAPN1-202ENST00000524773 TRAV13-1A0A0B4J241 112 aa9.54□□□□□ -0.88
CAPN1-202ENST00000524773 MEIG1Q5JSS6 88 aa9.54□□□□□ -0.88
CAPN1-202ENST00000524773 TMEM101Q96IK0 257 aa9.54□□□□□ -0.88
CAPN1-202ENST00000524773 LST1O00453 97 aa9.54□□□□□ -0.88
CAPN1-202ENST00000524773 RS1O15537 224 aa9.54□□□□□ -0.88
CAPN1-202ENST00000524773 LINC00694P0DN24 101 aa9.54□□□□□ -0.88
CAPN1-202ENST00000524773 MSMBP08118 114 aa9.53□□□□□ -0.88
CAPN1-202ENST00000524773 SOSTDC1Q6X4U4 206 aa9.53□□□□□ -0.88
CAPN1-202ENST00000524773 C10orf105Q8TEF2 133 aa9.53□□□□□ -0.88
CAPN1-202ENST00000524773 HERV-K104P63124 156 aa9.52□□□□□ -0.88
CAPN1-202ENST00000524773 DGAT2L7PQ6IED9 249 aa9.52□□□□□ -0.88
CAPN1-202ENST00000524773 SPANXDQ9BXN6 97 aa9.52□□□□□ -0.88
CAPN1-202ENST00000524773 SPANXCQ9NY87 97 aa9.52□□□□□ -0.88
CAPN1-202ENST00000524773 SHISA2Q6UWI4 295 aa9.52□□□□□ -0.89
CAPN1-202ENST00000524773 ZNF843Q8N446 348 aa9.52□□□□□ -0.89
CAPN1-202ENST00000524773 SMCR5Q8TEV8 140 aa9.52□□□□□ -0.89
CAPN1-202ENST00000524773 LINC01587Q99440 93 aa9.52□□□□□ -0.89
CAPN1-202ENST00000524773 PIK3CD-AS1Q5SR53 167 aa9.51□□□□□ -0.89
CAPN1-202ENST00000524773 TINCRA0A1B0GVN0 87 aa9.51□□□□□ -0.89
CAPN1-202ENST00000524773 KHDC1LQ5JSQ8 128 aa9.51□□□□□ -0.89
CAPN1-202ENST00000524773 Q9HAA7 133 aa9.51□□□□□ -0.89
CAPN1-202ENST00000524773 PYGO1Q9Y3Y4 419 aa9.51□□□□□ -0.89
CAPN1-202ENST00000524773 IGKV3OR2-268A0A0C4DH90 116 aa9.51□□□□□ -0.89
CAPN1-202ENST00000524773 UBE2E2Q96LR5 201 aa9.51□□□□□ -0.89
CAPN1-202ENST00000524773 M0QXV9 152 aa9.5□□□□□ -0.89
CAPN1-202ENST00000524773 NBEAL2Q6ZNJ1 2754 aa9.5□□□□□ -0.89
CAPN1-202ENST00000524773 FAM236AA0A1B0GUQ0 79 aa9.5□□□□□ -0.89
CAPN1-202ENST00000524773 FAM236BA0A1B0GV22 79 aa9.5□□□□□ -0.89
CAPN1-202ENST00000524773 LINC00308Q8TCZ7 52 aa9.5□□□□□ -0.89
CAPN1-202ENST00000524773 XCL2Q9UBD3 114 aa9.5□□□□□ -0.89
CAPN1-202ENST00000524773 FAM218AQ96MZ4 157 aa9.49□□□□□ -0.89
CAPN1-202ENST00000524773 SETXQ7Z333 2677 aaKnown RBP9.49□□□□□ -0.89
CAPN1-202ENST00000524773 H3BT86 120 aa9.48□□□□□ -0.89
CAPN1-202ENST00000524773 C11orf44Q8N8P7 122 aa9.48□□□□□ -0.89
CAPN1-202ENST00000524773 CCDC168Q8NDH2 2452 aa9.48□□□□□ -0.89
CAPN1-202ENST00000524773 UBR5O95071 2799 aaPredicted RBP9.48□□□□□ -0.89
CAPN1-202ENST00000524773 FN1P02751 2386 aaKnown RBP9.47□□□□□ -0.89
CAPN1-202ENST00000524773 LINC00242Q5T6M2 205 aa9.47□□□□□ -0.89
CAPN1-202ENST00000524773 DAZ2Q13117 558 aaKnown RBP9.47□□□□□ -0.89
CAPN1-202ENST00000524773 DAZ4Q86SG3 579 aaKnown RBP9.47□□□□□ -0.89
CAPN1-202ENST00000524773 PRIMA1Q86XR5 153 aa9.47□□□□□ -0.89
CAPN1-202ENST00000524773 DAZ3Q9NR90 486 aaKnown RBP9.47□□□□□ -0.89
CAPN1-202ENST00000524773 TMEM89A2RUT3 159 aa9.46□□□□□ -0.89
CAPN1-202ENST00000524773 SPANXA1Q9NS26 97 aa9.45□□□□□ -0.9
CAPN1-202ENST00000524773 NDUFA1O15239 70 aa9.45□□□□□ -0.9
CAPN1-202ENST00000524773 KLK5Q9Y337 293 aaPredicted RBP9.45□□□□□ -0.9
CAPN1-202ENST00000524773 TRGV1A0A0A0MS02 117 aa9.45□□□□□ -0.9
CAPN1-202ENST00000524773 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
CAPN1-202ENST00000524773 Q6Q795 121 aa9.45□□□□□ -0.9
CAPN1-202ENST00000524773 YAE1D1Q9NRH1 226 aa9.45□□□□□ -0.9
CAPN1-202ENST00000524773 RNF152Q8N8N0 203 aa9.44□□□□□ -0.9
CAPN1-202ENST00000524773 BAALC-AS2P0C853 105 aa9.44□□□□□ -0.9
CAPN1-202ENST00000524773 PLA2G2AP14555 144 aa9.44□□□□□ -0.9
CAPN1-202ENST00000524773 ZNF415Q09FC8 603 aa9.44□□□□□ -0.9
CAPN1-202ENST00000524773 CIRBPQ14011 172 aaKnown RBP9.44□□□□□ -0.9
CAPN1-202ENST00000524773 C11orf72Q8NBR9 251 aa9.44□□□□□ -0.9
CAPN1-202ENST00000524773 TOMM7Q9P0U1 55 aa9.44□□□□□ -0.9
CAPN1-202ENST00000524773 Q96MF0 132 aa9.43□□□□□ -0.9
CAPN1-202ENST00000524773 SMIM1B2RUZ4 78 aa9.43□□□□□ -0.9
CAPN1-202ENST00000524773 GAGE2AQ6NT46 116 aa9.43□□□□□ -0.9
CAPN1-202ENST00000524773 NTM-AS1Q6ZSK4 140 aa9.43□□□□□ -0.9
CAPN1-202ENST00000524773 C22orf24Q9Y442 160 aa9.42□□□□□ -0.9
CAPN1-202ENST00000524773 B4DSR2 109 aa9.42□□□□□ -0.9
CAPN1-202ENST00000524773 COX7A2LO14548 114 aa9.42□□□□□ -0.9
CAPN1-202ENST00000524773 EDA2RQ9HAV5 297 aa9.42□□□□□ -0.9
CAPN1-202ENST00000524773 LOC100131303A0A0U1RQF7 123 aa9.41□□□□□ -0.9
CAPN1-202ENST00000524773 Q6ZTI0 123 aa9.41□□□□□ -0.9
CAPN1-202ENST00000524773 C11orf68Q9H3H3 251 aaKnown RBP9.41□□□□□ -0.9
CAPN1-202ENST00000524773 MAP6D1Q9H9H5 199 aa9.41□□□□□ -0.9
CAPN1-202ENST00000524773 A0A1W2PRX2 142 aa9.41□□□□□ -0.9
CAPN1-202ENST00000524773 ATP5G1P05496 136 aa9.4□□□□□ -0.9
CAPN1-202ENST00000524773 TIRAPP58753 221 aa9.4□□□□□ -0.9
CAPN1-202ENST00000524773 LINC01600Q96MT4 127 aa9.4□□□□□ -0.9
CAPN1-202ENST00000524773 ZNF702PQ9H963 129 aa9.4□□□□□ -0.9
CAPN1-202ENST00000524773 DEFB121Q5J5C9 76 aa9.39□□□□□ -0.91
CAPN1-202ENST00000524773 PPDPFQ9H3Y8 114 aa9.39□□□□□ -0.91
CAPN1-202ENST00000524773 GCN1Q92616 2671 aaKnown RBP9.39□□□□□ -0.91
CAPN1-202ENST00000524773 DSCR9P59020 149 aa9.39□□□□□ -0.91
CAPN1-202ENST00000524773 DYNLRB2Q8TF09 96 aa9.39□□□□□ -0.91
CAPN1-202ENST00000524773 IGLV5-39A0A0G2JS06 123 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms