RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 DEFB4AO15263 64 aa5□□□□□ -1.61
VPS11-201ENST00000524454 P0DMU3 169 aa5□□□□□ -1.61
VPS11-201ENST00000524454 FAM231AP0DMU4 169 aa5□□□□□ -1.61
VPS11-201ENST00000524454 FAM231CP0DMU5 169 aa5□□□□□ -1.61
VPS11-201ENST00000524454 LINC00694P0DN24 101 aa5□□□□□ -1.61
VPS11-201ENST00000524454 FGF6P10767 208 aa5□□□□□ -1.61
VPS11-201ENST00000524454 UBE2D3P61077 147 aa5□□□□□ -1.61
VPS11-201ENST00000524454 HERVK_113P61574 105 aa5□□□□□ -1.61
VPS11-201ENST00000524454 UBE2D2P62837 147 aa5□□□□□ -1.61
VPS11-201ENST00000524454 MAJINQ3KP22 176 aa5□□□□□ -1.61
VPS11-201ENST00000524454 ZC2HC1BQ5TFG8 222 aa5□□□□□ -1.61
VPS11-201ENST00000524454 RNF183Q96D59 192 aa5□□□□□ -1.61
VPS11-201ENST00000524454 AMELXQ99217 191 aa5□□□□□ -1.61
VPS11-201ENST00000524454 PRADC1Q9BSG0 188 aa5□□□□□ -1.61
VPS11-201ENST00000524454 SNHG12Q9BXW3 62 aa5□□□□□ -1.61
VPS11-201ENST00000524454 CST9LQ9H4G1 147 aa5□□□□□ -1.61
VPS11-201ENST00000524454 IGLV4-3A0A075B6K6 122 aa4.99□□□□□ -1.61
VPS11-201ENST00000524454 ZNF25P17030 456 aaPredicted RBP4.99□□□□□ -1.61
VPS11-201ENST00000524454 SEC11AP67812 179 aa4.99□□□□□ -1.61
VPS11-201ENST00000524454 COL5A1-AS1Q5SY13 56 aa4.99□□□□□ -1.61
VPS11-201ENST00000524454 FAM19A3Q7Z5A8 133 aa4.99□□□□□ -1.61
VPS11-201ENST00000524454 SLC25A29Q8N8R3 303 aa4.99□□□□□ -1.61
VPS11-201ENST00000524454 OR11H2Q8NH07 326 aa4.99□□□□□ -1.61
VPS11-201ENST00000524454 ZNF479Q96JC4 524 aa4.99□□□□□ -1.61
VPS11-201ENST00000524454 CHCHD7Q9BUK0 85 aa4.99□□□□□ -1.61
VPS11-201ENST00000524454 NACAE9PAV3 2078 aa4.99□□□□□ -1.61
VPS11-201ENST00000524454 LYSTQ99698 3801 aa4.98□□□□□ -1.61
VPS11-201ENST00000524454 IGLV4-69A0A075B6H9 119 aa4.98□□□□□ -1.61
VPS11-201ENST00000524454 TRAV26-1A0A087WT03 109 aa4.98□□□□□ -1.61
VPS11-201ENST00000524454 RPL39P62891 51 aaKnown RBP4.98□□□□□ -1.61
VPS11-201ENST00000524454 HSD52Q0P140 79 aa4.98□□□□□ -1.61
VPS11-201ENST00000524454 TAL2Q16559 108 aa4.98□□□□□ -1.61
VPS11-201ENST00000524454 Q6ZSN1 163 aa4.98□□□□□ -1.61
VPS11-201ENST00000524454 NEGR1Q7Z3B1 354 aa4.98□□□□□ -1.61
VPS11-201ENST00000524454 VCX2Q9H322 139 aa4.98□□□□□ -1.61
VPS11-201ENST00000524454 UBE2D4Q9Y2X8 147 aa4.98□□□□□ -1.61
VPS11-201ENST00000524454 DYNC2H1Q8NCM8 4307 aaKnown RBP4.97□□□□□ -1.61
VPS11-201ENST00000524454 RYR2Q92736 4967 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 IGHV3-73A0A0B4J1V6 119 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 TRGV4A0A0C4DH28 118 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 TINCRA0A1B0GVN0 87 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 GAGE12BA1L429 117 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 GAGE7O76087 117 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 PLA2G1BP04054 148 aaKnown RBP4.97□□□□□ -1.61
VPS11-201ENST00000524454 PRM2P04554 102 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 GAGE12FP0CL80 117 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 GAGE12GP0CL81 117 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 GAGE12IP0CL82 117 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 FHL2Q14192 279 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 C2orf91Q6ZV80 131 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 SH2D6Q7Z4S9 175 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 STPG4Q8N801 248 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 PRO0255Q9UI72 69 aa4.97□□□□□ -1.61
VPS11-201ENST00000524454 TRBV25-1A0A075B6N4 114 aa4.96□□□□□ -1.62
VPS11-201ENST00000524454 IGLV5-45A0A087WSX0 123 aa4.96□□□□□ -1.62
VPS11-201ENST00000524454 NMUP48645 174 aa4.96□□□□□ -1.62
VPS11-201ENST00000524454 NANOS2P60321 138 aaKnown RBP4.96□□□□□ -1.62
VPS11-201ENST00000524454 Q8NAQ8 132 aa4.96□□□□□ -1.62
VPS11-201ENST00000524454 ZNRF2Q8NHG8 242 aa4.96□□□□□ -1.62
VPS11-201ENST00000524454 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
VPS11-201ENST00000524454 KRTAP9-4Q9BYQ2 154 aa4.96□□□□□ -1.62
VPS11-201ENST00000524454 C11orf68Q9H3H3 251 aaKnown RBP4.96□□□□□ -1.62
VPS11-201ENST00000524454 IGHV4-28A0A0C4DH34 117 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 LCE6AA0A183 80 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 MYMXA0A1B0GTQ4 84 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 A6NDN8 102 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 H3BNG1 76 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 CCL25O15444 150 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 SPART-AS1P0CW21 52 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 TIRAPP58753 221 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 HERVK_113P63121 156 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 BVES-AS1Q5T3Y7 98 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 PLEKHB2Q96CS7 222 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 TMEM243Q9BU79 118 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 CHAC1Q9BUX1 264 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 HYDINQ4G0P3 5121 aa4.95□□□□□ -1.62
VPS11-201ENST00000524454 TENM2Q9NT68 2774 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 IGKV2D-26A0A0A0MRZ7 120 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 TRBV6-8A0A0A6YYG3 113 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 TMEM223A0PJW6 202 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 H3BRM9 83 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 ATP5G1P05496 136 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 MPV17L2Q567V2 206 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 FAM222AQ5U5X8 452 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 DGAT2L7PQ6IED9 249 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 PCP2Q8IVA1 136 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 FAM104AQ969W3 186 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 TMEM101Q96IK0 257 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 TM2D2Q9BX73 214 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 CELA1Q9UNI1 258 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 ALMS1Q8TCU4 4167 aa4.94□□□□□ -1.62
VPS11-201ENST00000524454 PLECQ15149 4684 aaKnown RBP4.93□□□□□ -1.62
VPS11-201ENST00000524454 SACSQ9NZJ4 4579 aa4.93□□□□□ -1.62
VPS11-201ENST00000524454 A0A1B0GUV1 79 aa4.93□□□□□ -1.62
VPS11-201ENST00000524454 UBE2L6O14933 153 aa4.93□□□□□ -1.62
VPS11-201ENST00000524454 LEPROTO15243 131 aa4.93□□□□□ -1.62
VPS11-201ENST00000524454 ZNF22P17026 224 aaPredicted RBP4.93□□□□□ -1.62
VPS11-201ENST00000524454 UBE2D1P51668 147 aa4.93□□□□□ -1.62
VPS11-201ENST00000524454 EMP1P54849 157 aa4.93□□□□□ -1.62
VPS11-201ENST00000524454 DAD1P61803 113 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms