RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 H7C1H1 209 aa6.67□□□□□ -1.34
CTNNA1-235ENST00000522730 M0QY20 66 aa6.67□□□□□ -1.34
CTNNA1-235ENST00000522730 MT-ND6P03923 174 aa6.67□□□□□ -1.34
CTNNA1-235ENST00000522730 RAB4AP20338 218 aa6.67□□□□□ -1.34
CTNNA1-235ENST00000522730 RPS10P46783 165 aaKnown RBP6.67□□□□□ -1.34
CTNNA1-235ENST00000522730 MIAQ16674 131 aa6.67□□□□□ -1.34
CTNNA1-235ENST00000522730 CIRBP-AS1Q8TBR5 109 aa6.67□□□□□ -1.34
CTNNA1-235ENST00000522730 TRAPPC1Q9Y5R8 145 aa6.67□□□□□ -1.34
CTNNA1-235ENST00000522730 APCSP02743 223 aa6.66□□□□□ -1.34
CTNNA1-235ENST00000522730 PRSS1P07477 247 aa6.66□□□□□ -1.34
CTNNA1-235ENST00000522730 MRPL51Q4U2R6 128 aaKnown RBP6.66□□□□□ -1.34
CTNNA1-235ENST00000522730 TRAV26-2A0A0B4J265 109 aa6.65□□□□□ -1.34
CTNNA1-235ENST00000522730 FABP9Q0Z7S8 132 aa6.65□□□□□ -1.34
CTNNA1-235ENST00000522730 KIAA1644Q3SXP7 199 aa6.65□□□□□ -1.34
CTNNA1-235ENST00000522730 DPH3Q96FX2 82 aa6.65□□□□□ -1.34
CTNNA1-235ENST00000522730 MRAP2Q96G30 205 aa6.65□□□□□ -1.34
CTNNA1-235ENST00000522730 SMKR1H3BMG3 65 aa6.64□□□□□ -1.35
CTNNA1-235ENST00000522730 UBE2L6O14933 153 aa6.64□□□□□ -1.35
CTNNA1-235ENST00000522730 NCR2O95944 276 aa6.64□□□□□ -1.35
CTNNA1-235ENST00000522730 TRGC2P03986 189 aa6.64□□□□□ -1.35
CTNNA1-235ENST00000522730 REG3AQ06141 175 aa6.64□□□□□ -1.35
CTNNA1-235ENST00000522730 IQCJQ1A5X6 159 aa6.64□□□□□ -1.35
CTNNA1-235ENST00000522730 TMEM243Q9BU79 118 aa6.64□□□□□ -1.35
CTNNA1-235ENST00000522730 NIT2Q9NQR4 276 aa6.64□□□□□ -1.35
CTNNA1-235ENST00000522730 IGLV4-60A0A075B6I1 120 aa6.63□□□□□ -1.35
CTNNA1-235ENST00000522730 IGKV3OR2-268A0A0C4DH90 116 aa6.63□□□□□ -1.35
CTNNA1-235ENST00000522730 D6R8Y8 96 aa6.63□□□□□ -1.35
CTNNA1-235ENST00000522730 PHOX2AO14813 284 aa6.63□□□□□ -1.35
CTNNA1-235ENST00000522730 GAS8-AS1O95177 125 aa6.63□□□□□ -1.35
CTNNA1-235ENST00000522730 PPBPP02775 128 aa6.63□□□□□ -1.35
CTNNA1-235ENST00000522730 CKS2P33552 79 aa6.63□□□□□ -1.35
CTNNA1-235ENST00000522730 ORMDL3Q8N138 153 aa6.63□□□□□ -1.35
CTNNA1-235ENST00000522730 PRR34Q9NV39 138 aa6.63□□□□□ -1.35
CTNNA1-235ENST00000522730 hDV102S1A0JD36 115 aa6.62□□□□□ -1.35
CTNNA1-235ENST00000522730 AMTP48728 403 aa6.62□□□□□ -1.35
CTNNA1-235ENST00000522730 COTL1Q14019 142 aa6.62□□□□□ -1.35
CTNNA1-235ENST00000522730 DGAT2L7PQ6IED9 249 aa6.62□□□□□ -1.35
CTNNA1-235ENST00000522730 KRTAP26-1Q6PEX3 210 aa6.62□□□□□ -1.35
CTNNA1-235ENST00000522730 NRACQ8N912 160 aa6.62□□□□□ -1.35
CTNNA1-235ENST00000522730 C20orf203Q8NBC4 194 aa6.62□□□□□ -1.35
CTNNA1-235ENST00000522730 RPL39LQ96EH5 51 aaKnown RBP6.62□□□□□ -1.35
CTNNA1-235ENST00000522730 PRELID3AQ96N28 172 aa6.62□□□□□ -1.35
CTNNA1-235ENST00000522730 PPP1R17O96001 155 aa6.61□□□□□ -1.35
CTNNA1-235ENST00000522730 NPYP01303 97 aa6.61□□□□□ -1.35
CTNNA1-235ENST00000522730 ANKRD39Q53RE8 183 aa6.61□□□□□ -1.35
CTNNA1-235ENST00000522730 C9orf163Q8N9P6 203 aa6.61□□□□□ -1.35
CTNNA1-235ENST00000522730 ALKBH7Q9BT30 221 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-235ENST00000522730 LAMTOR2Q9Y2Q5 125 aa6.61□□□□□ -1.35
CTNNA1-235ENST00000522730 TRAV8-4A0A0B4J246 113 aa6.6□□□□□ -1.35
CTNNA1-235ENST00000522730 TNFRSF6BO95407 300 aa6.6□□□□□ -1.35
CTNNA1-235ENST00000522730 RPL37AP61513 92 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-235ENST00000522730 AMMECR1LQ6DCA0 310 aa6.6□□□□□ -1.35
CTNNA1-235ENST00000522730 AP5S1Q9NUS5 200 aa6.6□□□□□ -1.35
CTNNA1-235ENST00000522730 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-235ENST00000522730 LRP1Q07954 4544 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-235ENST00000522730 TRBV6-5A0A0K0K1A5 114 aa6.59□□□□□ -1.35
CTNNA1-235ENST00000522730 A0A1B0GUV1 79 aa6.59□□□□□ -1.35
CTNNA1-235ENST00000522730 GAGE12HA6NDE8 117 aa6.59□□□□□ -1.35
CTNNA1-235ENST00000522730 KRTAP29-1A8MX34 341 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-235ENST00000522730 PANO1I0J062 215 aa6.59□□□□□ -1.35
CTNNA1-235ENST00000522730 RNASEKQ6P5S7 137 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-235ENST00000522730 ST20Q9HBF5 79 aa6.59□□□□□ -1.35
CTNNA1-235ENST00000522730 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-235ENST00000522730 IGKV2-29A2NJV5 120 aaPredicted RBP6.58□□□□□ -1.36
CTNNA1-235ENST00000522730 C1orf196B1AJZ1 125 aa6.58□□□□□ -1.36
CTNNA1-235ENST00000522730 PMCHP20382 165 aa6.58□□□□□ -1.36
CTNNA1-235ENST00000522730 SUMO2P61956 95 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-235ENST00000522730 SDIM1Q6ZPB5 146 aa6.58□□□□□ -1.36
CTNNA1-235ENST00000522730 C20orf78Q9BR46 151 aa6.58□□□□□ -1.36
CTNNA1-235ENST00000522730 MAP1LC3AQ9H492 121 aa6.58□□□□□ -1.36
CTNNA1-235ENST00000522730 IGHV3-64A0A075B6Q5 118 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 LOC389332A0A1B0GUA5 103 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 SDHAF1A6NFY7 115 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 PRSS47A8MTI9 375 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 HIST1H2BKO60814 126 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 HIST1H2BJP06899 126 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 HIST1H2BOP23527 126 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 HIST1H2BBP33778 126 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 POLR2KP53803 58 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 HIST1H2BDP58876 126 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 KRTAP10-4P60372 401 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 HIST1H2BCP62807 126 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 RPL32P62910 135 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 HIST2H2BEQ16778 126 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 C18orf32Q8TCD1 76 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 HIST1H2BHQ93079 126 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 HIST1H2BNQ99877 126 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 HIST1H2BMQ99879 126 aa6.57□□□□□ -1.36
CTNNA1-235ENST00000522730 FAT3Q8TDW7 4589 aa6.56□□□□□ -1.36
CTNNA1-235ENST00000522730 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.56□□□□□ -1.36
CTNNA1-235ENST00000522730 H3BS24 57 aa6.56□□□□□ -1.36
CTNNA1-235ENST00000522730 SLPIP03973 132 aa6.56□□□□□ -1.36
CTNNA1-235ENST00000522730 CHTF8P0CG12 524 aa6.56□□□□□ -1.36
CTNNA1-235ENST00000522730 RAB5BP61020 215 aa6.56□□□□□ -1.36
CTNNA1-235ENST00000522730 HIGD2BQ4VC39 106 aa6.56□□□□□ -1.36
CTNNA1-235ENST00000522730 CFAP161Q6P656 301 aa6.56□□□□□ -1.36
CTNNA1-235ENST00000522730 SMIM2Q9BVW6 85 aa6.56□□□□□ -1.36
CTNNA1-235ENST00000522730 TRBV27A0A0K0K1C4 114 aa6.55□□□□□ -1.36
CTNNA1-235ENST00000522730 I3L3M4 83 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms