RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 F2Z2F3 143 aa3.88□□□□□ -1.79
PABPC1-220ENST00000522658 M0QY20 66 aa3.88□□□□□ -1.79
PABPC1-220ENST00000522658 GIPP09681 153 aaPredicted RBP3.88□□□□□ -1.79
PABPC1-220ENST00000522658 XCL1P47992 114 aa3.88□□□□□ -1.79
PABPC1-220ENST00000522658 UBE2D1P51668 147 aa3.88□□□□□ -1.79
PABPC1-220ENST00000522658 RPL18AQ02543 176 aaKnown RBP3.88□□□□□ -1.79
PABPC1-220ENST00000522658 GAGE2BQ13066 116 aa3.88□□□□□ -1.79
PABPC1-220ENST00000522658 KCNRGQ8N5I3 272 aa3.88□□□□□ -1.79
PABPC1-220ENST00000522658 FAM213BQ8TBF2 198 aa3.88□□□□□ -1.79
PABPC1-220ENST00000522658 SFT2D1Q8WV19 159 aa3.88□□□□□ -1.79
PABPC1-220ENST00000522658 BIN3Q9NQY0 253 aa3.88□□□□□ -1.79
PABPC1-220ENST00000522658 LRP2P98164 4655 aa3.88□□□□□ -1.79
PABPC1-220ENST00000522658 IGLV5-39A0A0G2JS06 123 aa3.87□□□□□ -1.79
PABPC1-220ENST00000522658 LOC107984640A0A0U1RRK4 108 aa3.87□□□□□ -1.79
PABPC1-220ENST00000522658 TEX46H3BTG2 121 aa3.87□□□□□ -1.79
PABPC1-220ENST00000522658 NCR2O95944 276 aa3.87□□□□□ -1.79
PABPC1-220ENST00000522658 IFNA1P01562 189 aa3.87□□□□□ -1.79
PABPC1-220ENST00000522658 ZNF25P17030 456 aaPredicted RBP3.87□□□□□ -1.79
PABPC1-220ENST00000522658 EIF5AP63241 154 aaKnown RBP3.87□□□□□ -1.79
PABPC1-220ENST00000522658 SS18Q15532 418 aa3.87□□□□□ -1.79
PABPC1-220ENST00000522658 EIF5AL1Q6IS14 154 aaKnown RBP3.87□□□□□ -1.79
PABPC1-220ENST00000522658 TSKUQ8WUA8 353 aa3.87□□□□□ -1.79
PABPC1-220ENST00000522658 GFRA4Q9GZZ7 299 aa3.87□□□□□ -1.79
PABPC1-220ENST00000522658 PSORS1C2Q9UIG4 136 aa3.87□□□□□ -1.79
PABPC1-220ENST00000522658 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.86□□□□□ -1.79
PABPC1-220ENST00000522658 IGKV2-29A2NJV5 120 aaPredicted RBP3.86□□□□□ -1.79
PABPC1-220ENST00000522658 UMAD1C9J7I0 102 aa3.86□□□□□ -1.79
PABPC1-220ENST00000522658 H7C423 109 aa3.86□□□□□ -1.79
PABPC1-220ENST00000522658 FGF6P10767 208 aa3.86□□□□□ -1.79
PABPC1-220ENST00000522658 RPL35P42766 123 aaKnown RBP3.86□□□□□ -1.79
PABPC1-220ENST00000522658 CAMPP49913 170 aa3.86□□□□□ -1.79
PABPC1-220ENST00000522658 GNG4P50150 75 aa3.86□□□□□ -1.79
PABPC1-220ENST00000522658 SYCNQ0VAF6 134 aa3.86□□□□□ -1.79
PABPC1-220ENST00000522658 SMAGPQ0VAQ4 97 aa3.86□□□□□ -1.79
PABPC1-220ENST00000522658 PRR4Q16378 134 aa3.86□□□□□ -1.79
PABPC1-220ENST00000522658 C1orf137Q5JT78 98 aa3.86□□□□□ -1.79
PABPC1-220ENST00000522658 OR5A1Q8NGJ0 315 aa3.86□□□□□ -1.79
PABPC1-220ENST00000522658 DIRC1Q969H9 104 aa3.86□□□□□ -1.79
PABPC1-220ENST00000522658 MANBALQ9NQG1 85 aa3.86□□□□□ -1.79
PABPC1-220ENST00000522658 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
PABPC1-220ENST00000522658 TRAV1-1A0A0B4J248 108 aa3.85□□□□□ -1.79
PABPC1-220ENST00000522658 CCL25O15444 150 aa3.85□□□□□ -1.79
PABPC1-220ENST00000522658 ARPC5O15511 151 aa3.85□□□□□ -1.79
PABPC1-220ENST00000522658 PMCHP20382 165 aa3.85□□□□□ -1.79
PABPC1-220ENST00000522658 KRTAP10-8P60410 259 aa3.85□□□□□ -1.79
PABPC1-220ENST00000522658 CENPWQ5EE01 88 aa3.85□□□□□ -1.79
PABPC1-220ENST00000522658 TEX261Q6UWH6 196 aa3.85□□□□□ -1.79
PABPC1-220ENST00000522658 TMUB2Q71RG4 321 aa3.85□□□□□ -1.79
PABPC1-220ENST00000522658 BORCS7Q96B45 105 aa3.85□□□□□ -1.79
PABPC1-220ENST00000522658 MRAP2Q96G30 205 aa3.85□□□□□ -1.79
PABPC1-220ENST00000522658 CAMK2N2Q96S95 79 aa3.85□□□□□ -1.79
PABPC1-220ENST00000522658 TNXBP22105 4242 aa3.85□□□□□ -1.79
PABPC1-220ENST00000522658 IGLV4-69A0A075B6H9 119 aa3.84□□□□□ -1.79
PABPC1-220ENST00000522658 KANTRA0A1W2PQU2 76 aa3.84□□□□□ -1.79
PABPC1-220ENST00000522658 APOMO95445 188 aa3.84□□□□□ -1.79
PABPC1-220ENST00000522658 IGLC6P0CF74 106 aa3.84□□□□□ -1.79
PABPC1-220ENST00000522658 NTF3P20783 257 aa3.84□□□□□ -1.79
PABPC1-220ENST00000522658 IFITM3Q01628 133 aa3.84□□□□□ -1.79
PABPC1-220ENST00000522658 LYZL1Q6UWQ5 148 aa3.84□□□□□ -1.79
PABPC1-220ENST00000522658 SMIM12Q96EX1 92 aa3.84□□□□□ -1.79
PABPC1-220ENST00000522658 LINC00526Q96FQ7 95 aa3.84□□□□□ -1.79
PABPC1-220ENST00000522658 GNG13Q9P2W3 67 aa3.84□□□□□ -1.79
PABPC1-220ENST00000522658 LINC00959A0A1B0GUT2 108 aa3.83□□□□□ -1.8
PABPC1-220ENST00000522658 SDHAF1A6NFY7 115 aa3.83□□□□□ -1.8
PABPC1-220ENST00000522658 COX7A2LO14548 114 aa3.83□□□□□ -1.8
PABPC1-220ENST00000522658 RPL13AP40429 203 aaKnown RBP3.83□□□□□ -1.8
PABPC1-220ENST00000522658 UBE2BP63146 152 aa3.83□□□□□ -1.8
PABPC1-220ENST00000522658 CD164L2Q6UWJ8 174 aa3.83□□□□□ -1.8
PABPC1-220ENST00000522658 A0A087WZ39 114 aa3.82□□□□□ -1.8
PABPC1-220ENST00000522658 C7orf77A4D0Y5 90 aa3.82□□□□□ -1.8
PABPC1-220ENST00000522658 I3L3M4 83 aa3.82□□□□□ -1.8
PABPC1-220ENST00000522658 PDE6DO43924 150 aa3.82□□□□□ -1.8
PABPC1-220ENST00000522658 BCL2P10415 239 aa3.82□□□□□ -1.8
PABPC1-220ENST00000522658 FCER1GP30273 86 aa3.82□□□□□ -1.8
PABPC1-220ENST00000522658 CTRLP40313 264 aa3.82□□□□□ -1.8
PABPC1-220ENST00000522658 C9orf116Q5BN46 136 aaPredicted RBP3.82□□□□□ -1.8
PABPC1-220ENST00000522658 RPP21Q9H633 154 aaKnown RBP3.82□□□□□ -1.8
PABPC1-220ENST00000522658 ST20Q9HBF5 79 aa3.82□□□□□ -1.8
PABPC1-220ENST00000522658 IGLV1-50A0A075B6I6 118 aa3.81□□□□□ -1.8
PABPC1-220ENST00000522658 C1orf196B1AJZ1 125 aa3.81□□□□□ -1.8
PABPC1-220ENST00000522658 CCL20P78556 96 aa3.81□□□□□ -1.8
PABPC1-220ENST00000522658 SPAG11BQ08648 103 aa3.81□□□□□ -1.8
PABPC1-220ENST00000522658 SRSF9Q13242 221 aaKnown RBP eCLIP3.81□□□□□ -1.8
PABPC1-220ENST00000522658 Q5BKY6 102 aa3.81□□□□□ -1.8
PABPC1-220ENST00000522658 PRR26Q8N8Z3 221 aa3.81□□□□□ -1.8
PABPC1-220ENST00000522658 GATD1Q8NB37 220 aa3.81□□□□□ -1.8
PABPC1-220ENST00000522658 MBD3L1Q8WWY6 194 aa3.81□□□□□ -1.8
PABPC1-220ENST00000522658 C11orf52Q96A22 123 aa3.81□□□□□ -1.8
PABPC1-220ENST00000522658 TMEM18Q96B42 140 aa3.81□□□□□ -1.8
PABPC1-220ENST00000522658 RPL39LQ96EH5 51 aaKnown RBP3.81□□□□□ -1.8
PABPC1-220ENST00000522658 FAM210AQ96ND0 272 aa3.81□□□□□ -1.8
PABPC1-220ENST00000522658 MED9Q9NWA0 146 aa3.81□□□□□ -1.8
PABPC1-220ENST00000522658 TMEM242Q9NWH2 141 aa3.81□□□□□ -1.8
PABPC1-220ENST00000522658 TRAV13-1A0A0B4J241 112 aa3.8□□□□□ -1.8
PABPC1-220ENST00000522658 C19orf71A6NCJ1 209 aa3.8□□□□□ -1.8
PABPC1-220ENST00000522658 H0Y9J4 135 aa3.8□□□□□ -1.8
PABPC1-220ENST00000522658 NDUFA1O15239 70 aa3.8□□□□□ -1.8
PABPC1-220ENST00000522658 BCL2L11O43521 198 aa3.8□□□□□ -1.8
PABPC1-220ENST00000522658 IGLV7-43P04211 117 aa3.8□□□□□ -1.8
PABPC1-220ENST00000522658 MEF2BQ02080 365 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 169.9 ms