RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 DEFB131BA0A096LNP1 70 aa6.6□□□□□ -1.35
SHPRH-209ENST00000521977 TRAV10A0A0B4J240 114 aa6.6□□□□□ -1.35
SHPRH-209ENST00000521977 TRAV12-1A0A0B4J245 112 aa6.6□□□□□ -1.35
SHPRH-209ENST00000521977 IGKV2-29A2NJV5 120 aaPredicted RBP6.6□□□□□ -1.35
SHPRH-209ENST00000521977 H7C423 109 aa6.6□□□□□ -1.35
SHPRH-209ENST00000521977 SCGB1D1O95968 90 aa6.6□□□□□ -1.35
SHPRH-209ENST00000521977 TEX43Q6ZNM6 134 aa6.6□□□□□ -1.35
SHPRH-209ENST00000521977 MRPL52Q86TS9 123 aaKnown RBP6.6□□□□□ -1.35
SHPRH-209ENST00000521977 BAALCQ8WXS3 180 aa6.6□□□□□ -1.35
SHPRH-209ENST00000521977 TMEM243Q9BU79 118 aa6.6□□□□□ -1.35
SHPRH-209ENST00000521977 SPANXA1Q9NS26 97 aa6.6□□□□□ -1.35
SHPRH-209ENST00000521977 DNAH7Q8WXX0 4024 aa6.6□□□□□ -1.35
SHPRH-209ENST00000521977 IGLV4-3A0A075B6K6 122 aa6.59□□□□□ -1.35
SHPRH-209ENST00000521977 C20orf202A1L168 122 aa6.59□□□□□ -1.35
SHPRH-209ENST00000521977 TIRAPP58753 221 aa6.59□□□□□ -1.35
SHPRH-209ENST00000521977 ODF1Q14990 250 aa6.59□□□□□ -1.35
SHPRH-209ENST00000521977 Q6ZN92 141 aa6.59□□□□□ -1.35
SHPRH-209ENST00000521977 C12orf57Q99622 126 aa6.59□□□□□ -1.35
SHPRH-209ENST00000521977 CSDC2Q9Y534 153 aaKnown RBP6.59□□□□□ -1.35
SHPRH-209ENST00000521977 A0A087WX48 190 aa6.58□□□□□ -1.36
SHPRH-209ENST00000521977 H0Y8G0 127 aa6.58□□□□□ -1.36
SHPRH-209ENST00000521977 PRSS1P07477 247 aa6.58□□□□□ -1.36
SHPRH-209ENST00000521977 MRPS36P82909 103 aaKnown RBP6.58□□□□□ -1.36
SHPRH-209ENST00000521977 AMELXQ99217 191 aa6.58□□□□□ -1.36
SHPRH-209ENST00000521977 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
SHPRH-209ENST00000521977 COL7A1Q02388 2944 aa6.57□□□□□ -1.36
SHPRH-209ENST00000521977 PRSS29PA6NIE9 313 aa6.57□□□□□ -1.36
SHPRH-209ENST00000521977 FGF6P10767 208 aa6.57□□□□□ -1.36
SHPRH-209ENST00000521977 SMAGPQ0VAQ4 97 aa6.57□□□□□ -1.36
SHPRH-209ENST00000521977 PMVKQ15126 192 aa6.57□□□□□ -1.36
SHPRH-209ENST00000521977 PAPPA-AS1Q5QFB9 102 aa6.57□□□□□ -1.36
SHPRH-209ENST00000521977 CEMP1Q6PRD7 247 aaPredicted RBP6.57□□□□□ -1.36
SHPRH-209ENST00000521977 OPRPNQ99935 248 aaPredicted RBP6.57□□□□□ -1.36
SHPRH-209ENST00000521977 F8VRH5 84 aa6.56□□□□□ -1.36
SHPRH-209ENST00000521977 ZNF25P17030 456 aaPredicted RBP6.56□□□□□ -1.36
SHPRH-209ENST00000521977 LELP1Q5T871 98 aa6.56□□□□□ -1.36
SHPRH-209ENST00000521977 LYPD5Q6UWN5 251 aa6.56□□□□□ -1.36
SHPRH-209ENST00000521977 Q6ZUT4 128 aa6.56□□□□□ -1.36
SHPRH-209ENST00000521977 PMCHL2Q9BQD1 86 aa6.56□□□□□ -1.36
SHPRH-209ENST00000521977 CST9LQ9H4G1 147 aa6.56□□□□□ -1.36
SHPRH-209ENST00000521977 MRPL35Q9NZE8 188 aaKnown RBP6.56□□□□□ -1.36
SHPRH-209ENST00000521977 MEGF8Q7Z7M0 2845 aa6.55□□□□□ -1.36
SHPRH-209ENST00000521977 UBE2L6O14933 153 aa6.55□□□□□ -1.36
SHPRH-209ENST00000521977 ZC2HC1BQ5TFG8 222 aa6.55□□□□□ -1.36
SHPRH-209ENST00000521977 C15orf53Q8NAA6 179 aa6.55□□□□□ -1.36
SHPRH-209ENST00000521977 VCX2Q9H322 139 aa6.55□□□□□ -1.36
SHPRH-209ENST00000521977 CDC42SE2Q9NRR3 84 aa6.55□□□□□ -1.36
SHPRH-209ENST00000521977 CHTOPQ9Y3Y2 248 aaKnown RBP6.55□□□□□ -1.36
SHPRH-209ENST00000521977 IGLV4-69A0A075B6H9 119 aa6.54□□□□□ -1.36
SHPRH-209ENST00000521977 TRAV9-2A0A087WT02 112 aa6.54□□□□□ -1.36
SHPRH-209ENST00000521977 A0A1B0GUV1 79 aa6.54□□□□□ -1.36
SHPRH-209ENST00000521977 DPM2O94777 84 aa6.54□□□□□ -1.36
SHPRH-209ENST00000521977 IGKCP01834 107 aa6.54□□□□□ -1.36
SHPRH-209ENST00000521977 PLNP26678 52 aa6.54□□□□□ -1.36
SHPRH-209ENST00000521977 GAGE6Q13070 117 aa6.54□□□□□ -1.36
SHPRH-209ENST00000521977 LCE4AQ5TA78 99 aa6.54□□□□□ -1.36
SHPRH-209ENST00000521977 ATOH7Q8N100 152 aa6.54□□□□□ -1.36
SHPRH-209ENST00000521977 CHCHD5Q9BSY4 110 aa6.54□□□□□ -1.36
SHPRH-209ENST00000521977 IGLV4-60A0A075B6I1 120 aa6.53□□□□□ -1.36
SHPRH-209ENST00000521977 IGLC3P0DOY3 106 aa6.53□□□□□ -1.36
SHPRH-209ENST00000521977 PKIAP61925 76 aa6.53□□□□□ -1.36
SHPRH-209ENST00000521977 S100A12P80511 92 aa6.53□□□□□ -1.36
SHPRH-209ENST00000521977 AMMECR1LQ6DCA0 310 aa6.53□□□□□ -1.36
SHPRH-209ENST00000521977 DGAT2L7PQ6IED9 249 aa6.53□□□□□ -1.36
SHPRH-209ENST00000521977 FAM19A3Q7Z5A8 133 aa6.53□□□□□ -1.36
SHPRH-209ENST00000521977 NFE4Q86UQ8 179 aa6.53□□□□□ -1.36
SHPRH-209ENST00000521977 ZNF664Q8N3J9 261 aa6.53□□□□□ -1.36
SHPRH-209ENST00000521977 OR5A1Q8NGJ0 315 aa6.53□□□□□ -1.36
SHPRH-209ENST00000521977 TMEM101Q96IK0 257 aa6.53□□□□□ -1.36
SHPRH-209ENST00000521977 hDV102S1A0JD36 115 aa6.52□□□□□ -1.37
SHPRH-209ENST00000521977 UBE2D1P51668 147 aa6.52□□□□□ -1.37
SHPRH-209ENST00000521977 RBX1P62877 108 aa6.52□□□□□ -1.37
SHPRH-209ENST00000521977 ESRGQ1W209 222 aa6.52□□□□□ -1.37
SHPRH-209ENST00000521977 MAJINQ3KP22 176 aa6.52□□□□□ -1.37
SHPRH-209ENST00000521977 MPV17L2Q567V2 206 aa6.52□□□□□ -1.37
SHPRH-209ENST00000521977 RNASE13Q5GAN3 156 aaKnown RBP6.52□□□□□ -1.37
SHPRH-209ENST00000521977 C2orf88Q9BSF0 95 aa6.52□□□□□ -1.37
SHPRH-209ENST00000521977 VAMP8Q9BV40 100 aa6.52□□□□□ -1.37
SHPRH-209ENST00000521977 C11orf86A6NJI1 115 aa6.51□□□□□ -1.37
SHPRH-209ENST00000521977 PAM16Q9Y3D7 125 aa6.51□□□□□ -1.37
SHPRH-209ENST00000521977 STARD9Q9P2P6 4700 aa6.51□□□□□ -1.37
SHPRH-209ENST00000521977 PLECQ15149 4684 aaKnown RBP6.5□□□□□ -1.37
SHPRH-209ENST00000521977 STAB2Q8WWQ8 2551 aa6.5□□□□□ -1.37
SHPRH-209ENST00000521977 TRAV8-6A0A0B4J262 113 aa6.5□□□□□ -1.37
SHPRH-209ENST00000521977 A0A0J9YXV3 536 aa6.5□□□□□ -1.37
SHPRH-209ENST00000521977 TINCRA0A1B0GVN0 87 aa6.5□□□□□ -1.37
SHPRH-209ENST00000521977 IGLL5B9A064 214 aa6.5□□□□□ -1.37
SHPRH-209ENST00000521977 TMEM262E9PQX1 116 aa6.5□□□□□ -1.37
SHPRH-209ENST00000521977 SPATA45Q537H7 98 aa6.5□□□□□ -1.37
SHPRH-209ENST00000521977 IGLV5-45A0A087WSX0 123 aa6.49□□□□□ -1.37
SHPRH-209ENST00000521977 HSBP1L1C9JCN9 74 aa6.49□□□□□ -1.37
SHPRH-209ENST00000521977 ZNF22P17026 224 aaPredicted RBP6.49□□□□□ -1.37
SHPRH-209ENST00000521977 STPG4Q8N801 248 aa6.49□□□□□ -1.37
SHPRH-209ENST00000521977 CHAC1Q9BUX1 264 aa6.49□□□□□ -1.37
SHPRH-209ENST00000521977 APLNQ9ULZ1 77 aa6.49□□□□□ -1.37
SHPRH-209ENST00000521977 CSMD3Q7Z407 3707 aa6.49□□□□□ -1.37
SHPRH-209ENST00000521977 NUPR2A6NF83 97 aa6.48□□□□□ -1.37
SHPRH-209ENST00000521977 SEC11AP67812 179 aa6.48□□□□□ -1.37
SHPRH-209ENST00000521977 LINC00242Q5T6M2 205 aa6.48□□□□□ -1.37
SHPRH-209ENST00000521977 WFDC10BQ8IUB3 73 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms