RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	FAM30A	Q9NZY2	134 aa		5.47	□□□□□ -1.53
CTNNA1-231	ENST00000521941	APOB	P04114	4563 aa	Known RBP	5.47	□□□□□ -1.53
CTNNA1-231	ENST00000521941	TRBV24-1	A0A075B6N3	115 aa		5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941	hDV102S1	A0JD36	115 aa		5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941	CCL25	O15444	150 aa		5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941	PPBP	P02775	128 aa		5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941	SMR3B	P02814	79 aa	Predicted RBP	5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941	PRSS1	P07477	247 aa		5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941	S100P	P25815	95 aa		5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941	XCL1	P47992	114 aa		5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941	RPL39	P62891	51 aa	Known RBP	5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941	HIGD2B	Q4VC39	106 aa		5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941		Q6ZUT4	128 aa		5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941	TMEM18	Q96B42	140 aa		5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941	CTDSP1	Q9GZU7	261 aa		5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941	RPS10P5	Q9NQ39	176 aa		5.46	□□□□□ -1.54
CTNNA1-231	ENST00000521941	RYR1	P21817	5038 aa		5.45	□□□□□ -1.54
CTNNA1-231	ENST00000521941	LINC00959	A0A1B0GUT2	108 aa		5.45	□□□□□ -1.54
CTNNA1-231	ENST00000521941	PHOX2A	O14813	284 aa		5.45	□□□□□ -1.54
CTNNA1-231	ENST00000521941	SMAGP	Q0VAQ4	97 aa		5.45	□□□□□ -1.54
CTNNA1-231	ENST00000521941	KIAA1644	Q3SXP7	199 aa		5.45	□□□□□ -1.54
CTNNA1-231	ENST00000521941	MRPL52	Q86TS9	123 aa	Known RBP	5.45	□□□□□ -1.54
CTNNA1-231	ENST00000521941		Q8N1X5	172 aa		5.45	□□□□□ -1.54
CTNNA1-231	ENST00000521941	MAP1LC3A	Q9H492	121 aa		5.45	□□□□□ -1.54
CTNNA1-231	ENST00000521941	CDC42SE2	Q9NRR3	84 aa		5.45	□□□□□ -1.54
CTNNA1-231	ENST00000521941	UBE2D4	Q9Y2X8	147 aa		5.45	□□□□□ -1.54
CTNNA1-231	ENST00000521941	TRAV13-1	A0A0B4J241	112 aa		5.44	□□□□□ -1.54
CTNNA1-231	ENST00000521941	RAB5A	P20339	215 aa		5.44	□□□□□ -1.54
CTNNA1-231	ENST00000521941	RPL32	P62910	135 aa	Known RBP	5.44	□□□□□ -1.54
CTNNA1-231	ENST00000521941	SS18	Q15532	418 aa		5.44	□□□□□ -1.54
CTNNA1-231	ENST00000521941	ZNF664	Q8N3J9	261 aa		5.44	□□□□□ -1.54
CTNNA1-231	ENST00000521941	C15orf56	Q8N910	161 aa		5.44	□□□□□ -1.54
CTNNA1-231	ENST00000521941	CLRN3	Q8NCR9	226 aa		5.44	□□□□□ -1.54
CTNNA1-231	ENST00000521941	IMMP2L	Q96T52	175 aa		5.44	□□□□□ -1.54
CTNNA1-231	ENST00000521941	AP5S1	Q9NUS5	200 aa		5.44	□□□□□ -1.54
CTNNA1-231	ENST00000521941	APOC3	P02656	99 aa		5.43	□□□□□ -1.54
CTNNA1-231	ENST00000521941	FOXI1	Q12951	378 aa		5.43	□□□□□ -1.54
CTNNA1-231	ENST00000521941	RHEB	Q15382	184 aa		5.43	□□□□□ -1.54
CTNNA1-231	ENST00000521941		Q5VSD8	79 aa		5.43	□□□□□ -1.54
CTNNA1-231	ENST00000521941	CARHSP1	Q9Y2V2	147 aa	Known RBP	5.43	□□□□□ -1.54
CTNNA1-231	ENST00000521941	TRAV9-1	A0A075B6T8	112 aa		5.42	□□□□□ -1.54
CTNNA1-231	ENST00000521941	EPM2A	B3EWF7	344 aa		5.42	□□□□□ -1.54
CTNNA1-231	ENST00000521941	NDUFA5	Q16718	116 aa		5.42	□□□□□ -1.54
CTNNA1-231	ENST00000521941	C10orf91	Q5T1B1	145 aa		5.42	□□□□□ -1.54
CTNNA1-231	ENST00000521941	CFAP161	Q6P656	301 aa		5.42	□□□□□ -1.54
CTNNA1-231	ENST00000521941	LINC00526	Q96FQ7	95 aa		5.42	□□□□□ -1.54
CTNNA1-231	ENST00000521941	OPRPN	Q99935	248 aa	Predicted RBP	5.42	□□□□□ -1.54
CTNNA1-231	ENST00000521941	LAMTOR2	Q9Y2Q5	125 aa		5.42	□□□□□ -1.54
CTNNA1-231	ENST00000521941	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.41	□□□□□ -1.54
CTNNA1-231	ENST00000521941	IFITM10	A6NMD0	228 aa		5.41	□□□□□ -1.54
CTNNA1-231	ENST00000521941	IFI27	P40305	119 aa	Predicted RBP	5.41	□□□□□ -1.54
CTNNA1-231	ENST00000521941		Q6ZSA8	131 aa		5.41	□□□□□ -1.54
CTNNA1-231	ENST00000521941	SCX	Q7RTU7	201 aa		5.41	□□□□□ -1.54
CTNNA1-231	ENST00000521941		Q8N8P6	123 aa		5.41	□□□□□ -1.54
CTNNA1-231	ENST00000521941	C9orf163	Q8N9P6	203 aa		5.41	□□□□□ -1.54
CTNNA1-231	ENST00000521941	TIMM21	Q9BVV7	248 aa		5.41	□□□□□ -1.54
CTNNA1-231	ENST00000521941	SPANXA1	Q9NS26	97 aa		5.41	□□□□□ -1.54
CTNNA1-231	ENST00000521941	CSDC2	Q9Y534	153 aa	Known RBP	5.41	□□□□□ -1.54
CTNNA1-231	ENST00000521941	IGHV1-58	A0A0C4DH39	117 aa		5.4	□□□□□ -1.54
CTNNA1-231	ENST00000521941	SNAPIN	O95295	136 aa		5.4	□□□□□ -1.54
CTNNA1-231	ENST00000521941	MAL	P21145	153 aa		5.4	□□□□□ -1.54
CTNNA1-231	ENST00000521941	CD164L2	Q6UWJ8	174 aa		5.4	□□□□□ -1.54
CTNNA1-231	ENST00000521941	C5orf38	Q86SI9	138 aa		5.4	□□□□□ -1.54
CTNNA1-231	ENST00000521941	MRPL18	Q9H0U6	180 aa	Known RBP	5.4	□□□□□ -1.54
CTNNA1-231	ENST00000521941	IGLV4-3	A0A075B6K6	122 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	IGHV3-64	A0A075B6Q5	118 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	GVQW2	A0A096LPI5	108 aa	Predicted RBP	5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	TGIF2-C20orf24	A0A0A6YYL0	155 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	C1orf196	B1AJZ1	125 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	FAM229A	H3BQW9	127 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	COX7A2L	O14548	114 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	SLPI	P03973	132 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	CNBP	P62633	177 aa	Known RBP	5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	FABP9	Q0Z7S8	132 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	ORMDL2	Q53FV1	153 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	ZC2HC1B	Q5TFG8	222 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	C2orf66	Q6UXQ4	117 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	LINC00528	Q8N1L1	170 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	SVBP	Q8N300	66 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	CIRBP-AS1	Q8TBR5	109 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	CHAC1	Q9BUX1	264 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	GNB1L	Q9BYB4	327 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	NXT2	Q9NPJ8	142 aa	Known RBP	5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	CYSLTR1	Q9Y271	337 aa		5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.39	□□□□□ -1.55
CTNNA1-231	ENST00000521941	PRSS47	A8MTI9	375 aa		5.38	□□□□□ -1.55
CTNNA1-231	ENST00000521941	PANO1	I0J062	215 aa		5.38	□□□□□ -1.55
CTNNA1-231	ENST00000521941	ZNF561-AS1	K7EIQ3	104 aa		5.38	□□□□□ -1.55
CTNNA1-231	ENST00000521941	MT-ND6	P03923	174 aa		5.38	□□□□□ -1.55
CTNNA1-231	ENST00000521941	CHTF8	P0CG12	524 aa		5.38	□□□□□ -1.55
CTNNA1-231	ENST00000521941	MRPS36	P82909	103 aa	Known RBP	5.38	□□□□□ -1.55
CTNNA1-231	ENST00000521941	COX19	Q49B96	90 aa		5.38	□□□□□ -1.55
CTNNA1-231	ENST00000521941		Q6ZN92	141 aa		5.38	□□□□□ -1.55
CTNNA1-231	ENST00000521941	PRSS3P2	Q8NHM4	247 aa		5.38	□□□□□ -1.55
CTNNA1-231	ENST00000521941	FAM104A	Q969W3	186 aa		5.38	□□□□□ -1.55
CTNNA1-231	ENST00000521941	DPH3	Q96FX2	82 aa		5.38	□□□□□ -1.55
CTNNA1-231	ENST00000521941	TMEM141	Q96I45	108 aa		5.38	□□□□□ -1.55
CTNNA1-231	ENST00000521941	IGKV2-24	A0A0C4DH68	120 aa		5.37	□□□□□ -1.55
CTNNA1-231	ENST00000521941	COX6A2	Q02221	97 aa		5.37	□□□□□ -1.55
CTNNA1-231	ENST00000521941	TEX43	Q6ZNM6	134 aa		5.37	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 167 ms