RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 TMEM223A0PJW6 202 aa4.77□□□□□ -1.65
CTNNA1-228ENST00000521640 LEPROTO15243 131 aa4.77□□□□□ -1.65
CTNNA1-228ENST00000521640 ZNF22P17026 224 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-228ENST00000521640 HIST2H2BDQ6DRA6 164 aa4.77□□□□□ -1.65
CTNNA1-228ENST00000521640 Q6ZTI0 123 aa4.77□□□□□ -1.65
CTNNA1-228ENST00000521640 ZNRF2Q8NHG8 242 aa4.77□□□□□ -1.65
CTNNA1-228ENST00000521640 ZNF469Q96JG9 3925 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-228ENST00000521640 IGHV3OR16-12A0A075B7B8 117 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 IGLV5-45A0A087WSX0 123 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 IGHV3-73A0A0B4J1V6 119 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 ZNF815PA8K554 130 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 SMIM13P0DJ93 91 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 LINC00694P0DN24 101 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 RPL35AP18077 110 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 APOC4P55056 127 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 TIRAPP58753 221 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 TMEM170BQ5T4T1 132 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 SBSPONQ8IVN8 264 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 MAPKAPK5-AS1Q8N8E1 139 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 OR5A1Q8NGJ0 315 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 FAM104AQ969W3 186 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 ZNF479Q96JC4 524 aa4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 NOP10Q9NPE3 64 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-228ENST00000521640 MTORP42345 2549 aa4.75□□□□□ -1.65
CTNNA1-228ENST00000521640 TRGV2A0A075B6R0 118 aa4.75□□□□□ -1.65
CTNNA1-228ENST00000521640 LYRM9A8MSI8 78 aa4.75□□□□□ -1.65
CTNNA1-228ENST00000521640 J3QQQ9 107 aa4.75□□□□□ -1.65
CTNNA1-228ENST00000521640 PRM2P04554 102 aa4.75□□□□□ -1.65
CTNNA1-228ENST00000521640 LGALS3P17931 250 aaKnown RBP4.75□□□□□ -1.65
CTNNA1-228ENST00000521640 GTF2H5Q6ZYL4 71 aa4.75□□□□□ -1.65
CTNNA1-228ENST00000521640 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.75□□□□□ -1.65
CTNNA1-228ENST00000521640 SLC25A29Q8N8R3 303 aa4.75□□□□□ -1.65
CTNNA1-228ENST00000521640 TTTY13Q9BZ97 58 aa4.75□□□□□ -1.65
CTNNA1-228ENST00000521640 WFDC10AQ9H1F0 79 aa4.75□□□□□ -1.65
CTNNA1-228ENST00000521640 AKAP9Q99996 3911 aa4.75□□□□□ -1.65
CTNNA1-228ENST00000521640 GCN1Q92616 2671 aaKnown RBP4.75□□□□□ -1.65
CTNNA1-228ENST00000521640 IGHV1-58A0A0C4DH39 117 aa4.74□□□□□ -1.65
CTNNA1-228ENST00000521640 A0A0J9YY99 117 aa4.74□□□□□ -1.65
CTNNA1-228ENST00000521640 UBE2D1P51668 147 aa4.74□□□□□ -1.65
CTNNA1-228ENST00000521640 FXYD2P54710 66 aa4.74□□□□□ -1.65
CTNNA1-228ENST00000521640 HERVK_113P63121 156 aa4.74□□□□□ -1.65
CTNNA1-228ENST00000521640 VAMP3Q15836 100 aa4.74□□□□□ -1.65
CTNNA1-228ENST00000521640 SCGB1D4Q6XE38 83 aa4.74□□□□□ -1.65
CTNNA1-228ENST00000521640 Q6ZVH6 145 aa4.74□□□□□ -1.65
CTNNA1-228ENST00000521640 PHLDA1Q8WV24 401 aaPredicted RBP4.74□□□□□ -1.65
CTNNA1-228ENST00000521640 HIST1H4GQ99525 98 aa4.74□□□□□ -1.65
CTNNA1-228ENST00000521640 NBPF19A0A087WUL8 3843 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 NSD1Q96L73 2696 aaPredicted RBP4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 TRGV4A0A0C4DH28 118 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 A0A0J9YXV3 536 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 TEX48A0A1B0GUV7 120 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 A0A1W2PPM0 123 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 TMEM238C9JI98 176 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 TIMM17BO60830 172 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 GAGE7O76087 117 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 GAGE12FP0CL80 117 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 GAGE12GP0CL81 117 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 GAGE12IP0CL82 117 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 MIFP14174 115 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 TCTAP57738 103 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 FOXI1Q12951 378 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 DGAT2L7PQ6IED9 249 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 Q6ZUT4 128 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 LINC00476Q8WZB0 136 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 RNF183Q96D59 192 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 TMEM243Q9BU79 118 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 PPDPFQ9H3Y8 114 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 OTOGQ6ZRI0 2925 aa4.73□□□□□ -1.65
CTNNA1-228ENST00000521640 WNK1Q9H4A3 2382 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 A0A0J9YXY3 114 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 IGKV2-29A2NJV5 120 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 A8MZ25 164 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 K7EP34 96 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 IGHV3-30-3P0DP02 117 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 FABP2P12104 132 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 TSPEAR-AS2P59090 65 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 C12orf74Q32Q52 190 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 ZFAND6Q6FIF0 208 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 NTM-AS1Q6ZSK4 140 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 TMEM101Q96IK0 257 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 VSIG2Q96IQ7 327 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 OPRPNQ99935 248 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 GEMIN7Q9H840 131 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 CDC42SE2Q9NRR3 84 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 NHP2Q9NX24 153 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 Q9UF83 564 aa4.72□□□□□ -1.65
CTNNA1-228ENST00000521640 FN1P02751 2386 aaKnown RBP4.71□□□□□ -1.65
CTNNA1-228ENST00000521640 C2CD3Q4AC94 2353 aa4.71□□□□□ -1.65
CTNNA1-228ENST00000521640 HECTD1Q9ULT8 2610 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 TRAV26-1A0A087WT03 109 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 TRBV6-8A0A0A6YYG3 113 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 IGHV3-38A0A0C4DH36 116 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 IGLV5-39A0A0G2JS06 123 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 GAGE12JA6NER3 117 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 GAGE10A6NGK3 116 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 K7EP13 123 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 UBE2L6O14933 153 aa4.71□□□□□ -1.66
CTNNA1-228ENST00000521640 CCL25O15444 150 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms