RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 SUMO2P61956 95 aaKnown RBP13.79□□□□□ -0.2
HOXA3-204ENST00000521401 TMEM101Q96IK0 257 aa13.79□□□□□ -0.2
HOXA3-204ENST00000521401 BTF3L4Q96K17 158 aa13.79□□□□□ -0.2
HOXA3-204ENST00000521401 CDC42SE2Q9NRR3 84 aa13.79□□□□□ -0.2
HOXA3-204ENST00000521401 PKHD1L1Q86WI1 4243 aa13.79□□□□□ -0.2
HOXA3-204ENST00000521401 LRP1Q07954 4544 aaKnown RBP13.79□□□□□ -0.2
HOXA3-204ENST00000521401 LINC00959A0A1B0GUT2 108 aa13.78□□□□□ -0.2
HOXA3-204ENST00000521401 C7orf77A4D0Y5 90 aa13.78□□□□□ -0.2
HOXA3-204ENST00000521401 PPP1R17O96001 155 aa13.78□□□□□ -0.2
HOXA3-204ENST00000521401 CIRBPQ14011 172 aaKnown RBP13.78□□□□□ -0.2
HOXA3-204ENST00000521401 CFAP161Q6P656 301 aa13.78□□□□□ -0.2
HOXA3-204ENST00000521401 IGHV3-64A0A075B6Q5 118 aa13.76□□□□□ -0.21
HOXA3-204ENST00000521401 A0A1B0GW15 77 aa13.76□□□□□ -0.21
HOXA3-204ENST00000521401 HIGD2BQ4VC39 106 aa13.76□□□□□ -0.21
HOXA3-204ENST00000521401 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.75□□□□□ -0.21
HOXA3-204ENST00000521401 A0A1B0GXF2 115 aa13.75□□□□□ -0.21
HOXA3-204ENST00000521401 LINC00862A6NCI5 91 aa13.75□□□□□ -0.21
HOXA3-204ENST00000521401 TRBV24-1A0A075B6N3 115 aa13.74□□□□□ -0.21
HOXA3-204ENST00000521401 GVQW2A0A096LPI5 108 aaPredicted RBP13.74□□□□□ -0.21
HOXA3-204ENST00000521401 PPP1R2P9O14990 202 aa13.74□□□□□ -0.21
HOXA3-204ENST00000521401 CCL25O15444 150 aa13.74□□□□□ -0.21
HOXA3-204ENST00000521401 FCER1GP30273 86 aa13.74□□□□□ -0.21
HOXA3-204ENST00000521401 XCL1P47992 114 aa13.74□□□□□ -0.21
HOXA3-204ENST00000521401 MRPL54Q6P161 138 aaKnown RBP13.74□□□□□ -0.21
HOXA3-204ENST00000521401 ZNF664Q8N3J9 261 aa13.74□□□□□ -0.21
HOXA3-204ENST00000521401 C20orf78Q9BR46 151 aa13.73□□□□□ -0.21
HOXA3-204ENST00000521401 UBE2D4Q9Y2X8 147 aa13.73□□□□□ -0.21
HOXA3-204ENST00000521401 DMBT1Q9UGM3 2413 aaPredicted RBP13.73□□□□□ -0.21
HOXA3-204ENST00000521401 CHTF8P0CG12 524 aa13.72□□□□□ -0.21
HOXA3-204ENST00000521401 CKS2P33552 79 aa13.72□□□□□ -0.21
HOXA3-204ENST00000521401 RPL32P62910 135 aaKnown RBP13.72□□□□□ -0.21
HOXA3-204ENST00000521401 HBBP68871 147 aa13.72□□□□□ -0.21
HOXA3-204ENST00000521401 KIR2DL4Q99706 377 aa13.72□□□□□ -0.21
HOXA3-204ENST00000521401 CSDC2Q9Y534 153 aaKnown RBP13.72□□□□□ -0.21
HOXA3-204ENST00000521401 KRTAP29-1A8MX34 341 aaPredicted RBP13.71□□□□□ -0.21
HOXA3-204ENST00000521401 TNFRSF6BO95407 300 aa13.7□□□□□ -0.22
HOXA3-204ENST00000521401 RPL37AP61513 92 aaKnown RBP13.7□□□□□ -0.22
HOXA3-204ENST00000521401 SS18Q15532 418 aa13.7□□□□□ -0.22
HOXA3-204ENST00000521401 CD164L2Q6UWJ8 174 aa13.7□□□□□ -0.22
HOXA3-204ENST00000521401 SPACA4Q8TDM5 124 aa13.7□□□□□ -0.22
HOXA3-204ENST00000521401 D6R8Y8 96 aa13.69□□□□□ -0.22
HOXA3-204ENST00000521401 S100A8P05109 93 aa13.69□□□□□ -0.22
HOXA3-204ENST00000521401 A0A087WYN8 130 aa13.68□□□□□ -0.22
HOXA3-204ENST00000521401 IGHV1-58A0A0C4DH39 117 aa13.68□□□□□ -0.22
HOXA3-204ENST00000521401 F8W036 122 aa13.68□□□□□ -0.22
HOXA3-204ENST00000521401 COX6A2Q02221 97 aa13.68□□□□□ -0.22
HOXA3-204ENST00000521401 PRSS3P2Q8NHM4 247 aa13.68□□□□□ -0.22
HOXA3-204ENST00000521401 NPYP01303 97 aa13.67□□□□□ -0.22
HOXA3-204ENST00000521401 RNASE13Q5GAN3 156 aaKnown RBP13.67□□□□□ -0.22
HOXA3-204ENST00000521401 ATP5L2Q7Z4Y8 100 aa13.67□□□□□ -0.22
HOXA3-204ENST00000521401 TIMM21Q9BVV7 248 aa13.67□□□□□ -0.22
HOXA3-204ENST00000521401 SMIM2Q9BVW6 85 aa13.67□□□□□ -0.22
HOXA3-204ENST00000521401 J3QL48 77 aa13.66□□□□□ -0.22
HOXA3-204ENST00000521401 HNRNPA3P51991 378 aaKnown RBP13.66□□□□□ -0.22
HOXA3-204ENST00000521401 RAB14P61106 215 aa13.66□□□□□ -0.22
HOXA3-204ENST00000521401 Q6ZUT4 128 aa13.66□□□□□ -0.22
HOXA3-204ENST00000521401 FAM104AQ969W3 186 aa13.66□□□□□ -0.22
HOXA3-204ENST00000521401 LINC00526Q96FQ7 95 aa13.66□□□□□ -0.22
HOXA3-204ENST00000521401 PHOX2AO14813 284 aa13.65□□□□□ -0.22
HOXA3-204ENST00000521401 SMAGPQ0VAQ4 97 aa13.65□□□□□ -0.22
HOXA3-204ENST00000521401 PNRC1Q12796 327 aaPredicted RBP13.65□□□□□ -0.22
HOXA3-204ENST00000521401 PLAC8Q9NZF1 115 aa13.65□□□□□ -0.22
HOXA3-204ENST00000521401 C1orf196B1AJZ1 125 aa13.64□□□□□ -0.23
HOXA3-204ENST00000521401 PPBPP02775 128 aa13.64□□□□□ -0.23
HOXA3-204ENST00000521401 RPL39P62891 51 aaKnown RBP13.64□□□□□ -0.23
HOXA3-204ENST00000521401 TMEM18Q96B42 140 aa13.64□□□□□ -0.23
HOXA3-204ENST00000521401 DPH3Q96FX2 82 aa13.64□□□□□ -0.23
HOXA3-204ENST00000521401 TCAPO15273 167 aa13.63□□□□□ -0.23
HOXA3-204ENST00000521401 CLLU1Q5K131 121 aa13.63□□□□□ -0.23
HOXA3-204ENST00000521401 TRAV13-1A0A0B4J241 112 aa13.62□□□□□ -0.23
HOXA3-204ENST00000521401 ANAPC16Q96DE5 110 aa13.62□□□□□ -0.23
HOXA3-204ENST00000521401 TMEM136Q6ZRR5 245 aa13.61□□□□□ -0.23
HOXA3-204ENST00000521401 ORMDL3Q8N138 153 aa13.61□□□□□ -0.23
HOXA3-204ENST00000521401 IGKV2-24A0A0C4DH68 120 aa13.6□□□□□ -0.23
HOXA3-204ENST00000521401 MT-ND4LP03901 98 aa13.6□□□□□ -0.23
HOXA3-204ENST00000521401 MAJINQ3KP22 176 aa13.6□□□□□ -0.23
HOXA3-204ENST00000521401 A0A096LNI7 61 aa13.59□□□□□ -0.23
HOXA3-204ENST00000521401 COX7A2LO14548 114 aa13.59□□□□□ -0.23
HOXA3-204ENST00000521401 CARD19Q96LW7 228 aa13.59□□□□□ -0.23
HOXA3-204ENST00000521401 PRELID3AQ96N28 172 aa13.59□□□□□ -0.23
HOXA3-204ENST00000521401 ZNF561-AS1K7EIQ3 104 aa13.58□□□□□ -0.24
HOXA3-204ENST00000521401 OXTP01178 125 aa13.58□□□□□ -0.24
HOXA3-204ENST00000521401 OPRPNQ99935 248 aaPredicted RBP13.58□□□□□ -0.24
HOXA3-204ENST00000521401 SPANXA1Q9NS26 97 aa13.58□□□□□ -0.24
HOXA3-204ENST00000521401 IGLV4-69A0A075B6H9 119 aa13.57□□□□□ -0.24
HOXA3-204ENST00000521401 PRSS47A8MTI9 375 aa13.57□□□□□ -0.24
HOXA3-204ENST00000521401 MALP21145 153 aa13.57□□□□□ -0.24
HOXA3-204ENST00000521401 MRPS36P82909 103 aaKnown RBP13.57□□□□□ -0.24
HOXA3-204ENST00000521401 IFITM2Q01629 132 aa13.57□□□□□ -0.24
HOXA3-204ENST00000521401 SYCNQ0VAF6 134 aa13.57□□□□□ -0.24
HOXA3-204ENST00000521401 C5orf38Q86SI9 138 aa13.57□□□□□ -0.24
HOXA3-204ENST00000521401 ADCYAP1P18509 176 aa13.55□□□□□ -0.24
HOXA3-204ENST00000521401 STPG4Q8N801 248 aa13.55□□□□□ -0.24
HOXA3-204ENST00000521401 Q6ZRU5 148 aa13.54□□□□□ -0.24
HOXA3-204ENST00000521401 LAMTOR2Q9Y2Q5 125 aa13.54□□□□□ -0.24
HOXA3-204ENST00000521401 IGHV3OR16-9A0A0B4J2B5 98 aa13.52□□□□□ -0.25
HOXA3-204ENST00000521401 LOC389332A0A1B0GUA5 103 aa13.52□□□□□ -0.25
HOXA3-204ENST00000521401 RAB5AP20339 215 aa13.52□□□□□ -0.25
HOXA3-204ENST00000521401 C2orf48Q96LS8 159 aa13.52□□□□□ -0.25
HOXA3-204ENST00000521401 LINC00474Q9P2X8 69 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms