RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SSX8Q7RTT4 187 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 LINC00305Q7Z4B0 112 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 BORCS7Q96B45 105 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 ZC2HC1AQ96GY0 325 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 TMEM70Q9BUB7 260 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 TMEM191AQ9H0A3 160 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 KAAG1Q9UBP8 84 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 EPDR1Q9UM22 224 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 RIF1Q5UIP0 2472 aaKnown RBP1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 DOPEY2Q9Y3R5 2298 aa1.5□□□□□ -2.17
HMGN1P28-201ENST00000521340 SPTA1P02549 2419 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 NBASA2RRP1 2371 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 AKAP6Q13023 2319 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 TRBV19A0A075B6N1 114 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 A0A1B0GUT8 65 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 LINC01546A6NGU7 62 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 OR2T8A6NH00 312 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 I3L2K1 104 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 K7EIM0 57 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 LEPROTL1O95214 131 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 NCR2O95944 276 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 NBEAP1P0C6P0 100 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 ARMS2P0C7Q2 107 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 IGLC6P0CF74 106 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 COX8AP10176 69 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 HLA-DRB4P13762 266 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 CD24P25063 80 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 XCL1P47992 114 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 FOXA3P55318 350 aaPredicted RBP1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 ARF6P62330 175 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 SEC11AP67812 179 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 PSG9Q00887 426 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 PDE6HQ13956 83 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 HES1Q14469 280 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 TPRXLQ17RH7 258 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 AMTNQ6UX39 209 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 KRTAP13-1Q8IUC0 172 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 DEFB108BQ8NET1 73 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 SMCR5Q8TEV8 140 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 PMCHL2Q9BQD1 86 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 CNFNQ9BYD5 112 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 TTTY13Q9BZ97 58 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 TMEM133Q9H2Q1 129 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 HSPB8Q9UJY1 196 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 HIGD1AQ9Y241 93 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 HLA-DRB4X5D2U9 266 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 GPR98Q8WXG9 6306 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 VPS13AQ96RL7 3174 aa1.49□□□□□ -2.17
HMGN1P28-201ENST00000521340 SPENQ96T58 3664 aaKnown RBP1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 A0A0J9YX75 114 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 LY6LH3BQJ8 138 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 K7EP34 96 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 NDUFB3O43676 98 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 NDUFA3O95167 84 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 NPYP01303 97 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 IGHV1-69P01742 117 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 HBDP02042 147 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 IGKV4-1P06312 121 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 CRIP1P50238 77 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 CCL8P80075 99 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 HSD52Q0P140 79 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 DEFB109BQ30KR1 87 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 OCIAD2Q56VL3 154 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 GOLT1AQ6ZVE7 132 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 BPIFA4PQ86YQ2 179 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 EXOC3-AS1Q8N2X6 119 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 Q8N6K4 173 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 DEFB124Q8NES8 71 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 OR10AG1Q8NH19 301 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 CST9LQ9H4G1 147 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 PRO2289Q9P1D8 64 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 FRYLO94915 3013 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 IGF2RP11717 2491 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 SPTAN1Q13813 2472 aaKnown RBP1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 HRNRQ86YZ3 2850 aaPredicted RBP1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 FRYQ5TBA9 3013 aa1.48□□□□□ -2.17
HMGN1P28-201ENST00000521340 ZNF292O60281 2723 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 FREM2Q5SZK8 3169 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 PIEZO2Q9H5I5 2752 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 IGKV2-40A0A087WW87 121 aaPredicted RBP1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 SPAARA0A1B0GVQ0 90 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 C7orf71A4D174 169 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 D6R8Y8 96 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 H3BPC8 53 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 H3BRM9 83 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 BUB1B-PAK6H3BSN5 160 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 K7ERU9 68 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 M0R3E3 92 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 GNRH2O43555 120 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 IGKV2D-40P01614 121 aaPredicted RBP1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 APELAP0DMC3 54 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 IFI27P40305 119 aaPredicted RBP1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 CSN1S1P47710 185 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 PMAIP1Q13794 54 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 KLK9Q2XQG4 91 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 TMEM97Q5BJF2 176 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 OR4X2Q8NGF9 303 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 OR5A1Q8NGJ0 315 aa1.47□□□□□ -2.17
HMGN1P28-201ENST00000521340 Q8TAT8 98 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms