RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 PRR3P79522 188 aaKnown RBP9.36□□□□□ -0.91
PRKDC-204ENST00000521331 HIGD2BQ4VC39 106 aa9.36□□□□□ -0.91
PRKDC-204ENST00000521331 EIF5A2Q9GZV4 153 aaKnown RBP9.36□□□□□ -0.91
PRKDC-204ENST00000521331 GVQW2A0A096LPI5 108 aaPredicted RBP9.35□□□□□ -0.91
PRKDC-204ENST00000521331 IGKV2-24A0A0C4DH68 120 aa9.35□□□□□ -0.91
PRKDC-204ENST00000521331 IGKV3OR2-268A0A0C4DH90 116 aa9.35□□□□□ -0.91
PRKDC-204ENST00000521331 FABP9Q0Z7S8 132 aa9.35□□□□□ -0.91
PRKDC-204ENST00000521331 AMMECR1LQ6DCA0 310 aa9.35□□□□□ -0.91
PRKDC-204ENST00000521331 STPG4Q8N801 248 aa9.35□□□□□ -0.91
PRKDC-204ENST00000521331 PRSS3P2Q8NHM4 247 aa9.35□□□□□ -0.91
PRKDC-204ENST00000521331 CHCHD10Q8WYQ3 142 aaPredicted RBP9.35□□□□□ -0.91
PRKDC-204ENST00000521331 NCR2O95944 276 aa9.34□□□□□ -0.91
PRKDC-204ENST00000521331 LINC00474Q9P2X8 69 aa9.34□□□□□ -0.91
PRKDC-204ENST00000521331 PKIGQ9Y2B9 76 aa9.34□□□□□ -0.91
PRKDC-204ENST00000521331 H7C423 109 aa9.33□□□□□ -0.92
PRKDC-204ENST00000521331 GATCO43716 136 aaKnown RBP9.33□□□□□ -0.92
PRKDC-204ENST00000521331 PDE6DO43924 150 aa9.33□□□□□ -0.92
PRKDC-204ENST00000521331 CTRLP40313 264 aa9.33□□□□□ -0.92
PRKDC-204ENST00000521331 PNRC1Q12796 327 aaPredicted RBP9.33□□□□□ -0.92
PRKDC-204ENST00000521331 TWIST1Q15672 202 aa9.33□□□□□ -0.92
PRKDC-204ENST00000521331 GATD1Q8NB37 220 aa9.33□□□□□ -0.92
PRKDC-204ENST00000521331 CNFNQ9BYD5 112 aa9.33□□□□□ -0.92
PRKDC-204ENST00000521331 LINC00587B1AMM8 73 aa9.32□□□□□ -0.92
PRKDC-204ENST00000521331 MEF2BQ02080 365 aaPredicted RBP9.32□□□□□ -0.92
PRKDC-204ENST00000521331 RNASEKQ6P5S7 137 aaKnown RBP9.32□□□□□ -0.92
PRKDC-204ENST00000521331 ISOC2Q96AB3 205 aa9.32□□□□□ -0.92
PRKDC-204ENST00000521331 A0A0J9YXV3 536 aa9.31□□□□□ -0.92
PRKDC-204ENST00000521331 REG3GQ6UW15 175 aa9.31□□□□□ -0.92
PRKDC-204ENST00000521331 SPINK6Q6UWN8 80 aa9.31□□□□□ -0.92
PRKDC-204ENST00000521331 TRBV20OR9-2A0A075B6H5 130 aa9.3□□□□□ -0.92
PRKDC-204ENST00000521331 TRBV24-1A0A075B6N3 115 aa9.3□□□□□ -0.92
PRKDC-204ENST00000521331 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.3□□□□□ -0.92
PRKDC-204ENST00000521331 A0A096LNI7 61 aa9.3□□□□□ -0.92
PRKDC-204ENST00000521331 TRAV26-2A0A0B4J265 109 aa9.3□□□□□ -0.92
PRKDC-204ENST00000521331 IGKV2-29A2NJV5 120 aaPredicted RBP9.3□□□□□ -0.92
PRKDC-204ENST00000521331 APCSP02743 223 aa9.3□□□□□ -0.92
PRKDC-204ENST00000521331 FGF6P10767 208 aa9.3□□□□□ -0.92
PRKDC-204ENST00000521331 FOXI1Q12951 378 aa9.3□□□□□ -0.92
PRKDC-204ENST00000521331 NUDT10Q8NFP7 164 aa9.3□□□□□ -0.92
PRKDC-204ENST00000521331 NUDT11Q96G61 164 aa9.3□□□□□ -0.92
PRKDC-204ENST00000521331 IFITM10A6NMD0 228 aa9.29□□□□□ -0.92
PRKDC-204ENST00000521331 ZNF25P17030 456 aaPredicted RBP9.29□□□□□ -0.92
PRKDC-204ENST00000521331 TAGLN2P37802 199 aaKnown RBP9.29□□□□□ -0.92
PRKDC-204ENST00000521331 SMIM15Q7Z3B0 74 aa9.29□□□□□ -0.92
PRKDC-204ENST00000521331 CTDSP1Q9GZU7 261 aa9.29□□□□□ -0.92
PRKDC-204ENST00000521331 KRTAP10-8P60410 259 aa9.28□□□□□ -0.92
PRKDC-204ENST00000521331 OR5A1Q8NGJ0 315 aa9.28□□□□□ -0.92
PRKDC-204ENST00000521331 RPL39LQ96EH5 51 aaKnown RBP9.28□□□□□ -0.92
PRKDC-204ENST00000521331 TMEM101Q96IK0 257 aa9.28□□□□□ -0.92
PRKDC-204ENST00000521331 RPP21Q9H633 154 aaKnown RBP9.28□□□□□ -0.92
PRKDC-204ENST00000521331 IGHV1-58A0A0C4DH39 117 aa9.27□□□□□ -0.93
PRKDC-204ENST00000521331 SDHAF1A6NFY7 115 aa9.27□□□□□ -0.93
PRKDC-204ENST00000521331 BCL2P10415 239 aa9.27□□□□□ -0.93
PRKDC-204ENST00000521331 XCL1P47992 114 aa9.27□□□□□ -0.93
PRKDC-204ENST00000521331 COA6Q5JTJ3 125 aaKnown RBP9.27□□□□□ -0.93
PRKDC-204ENST00000521331 BTF3L4Q96K17 158 aa9.27□□□□□ -0.93
PRKDC-204ENST00000521331 CARD19Q96LW7 228 aa9.27□□□□□ -0.93
PRKDC-204ENST00000521331 RNF213Q63HN8 5207 aa9.26□□□□□ -0.93
PRKDC-204ENST00000521331 SMCPP49901 116 aaPredicted RBP9.26□□□□□ -0.93
PRKDC-204ENST00000521331 Q6ZRP5 223 aa9.26□□□□□ -0.93
PRKDC-204ENST00000521331 LINC00959A0A1B0GUT2 108 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 I3L3M4 83 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 CCL25O15444 150 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 HIST1H2BKO60814 126 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 HIST1H2BJP06899 126 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 HIST1H2BOP23527 126 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 HIST1H2BBP33778 126 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 HIST1H2BDP58876 126 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 HIST1H2BCP62807 126 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 ODF1Q14990 250 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 HIST2H2BEQ16778 126 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 PYY3Q5JQD4 70 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.25□□□□□ -0.93
PRKDC-204ENST00000521331 HIST3H2BBQ8N257 126 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 LINC00469Q8N7U9 141 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 HIST1H2BHQ93079 126 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 HIST1H2BNQ99877 126 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 HIST1H2BMQ99879 126 aa9.25□□□□□ -0.93
PRKDC-204ENST00000521331 RNASE7Q9H1E1 156 aaKnown RBP9.25□□□□□ -0.93
PRKDC-204ENST00000521331 ZNF727A8MUV8 499 aa9.24□□□□□ -0.93
PRKDC-204ENST00000521331 TMEM250H0YL14 139 aa9.24□□□□□ -0.93
PRKDC-204ENST00000521331 PMCHP20382 165 aa9.24□□□□□ -0.93
PRKDC-204ENST00000521331 SRSF9Q13242 221 aaKnown RBP eCLIP9.24□□□□□ -0.93
PRKDC-204ENST00000521331 TRBV6-5A0A0K0K1A5 114 aa9.23□□□□□ -0.93
PRKDC-204ENST00000521331 FAM231BA6NCW3 169 aa9.23□□□□□ -0.93
PRKDC-204ENST00000521331 ZNF561-AS1K7EIQ3 104 aa9.23□□□□□ -0.93
PRKDC-204ENST00000521331 K7EN84 100 aa9.23□□□□□ -0.93
PRKDC-204ENST00000521331 S100A2P29034 98 aa9.23□□□□□ -0.93
PRKDC-204ENST00000521331 FOXA3P55318 350 aaPredicted RBP9.23□□□□□ -0.93
PRKDC-204ENST00000521331 SYCNQ0VAF6 134 aa9.23□□□□□ -0.93
PRKDC-204ENST00000521331 SS18Q15532 418 aa9.23□□□□□ -0.93
PRKDC-204ENST00000521331 MRAP2Q96G30 205 aa9.23□□□□□ -0.93
PRKDC-204ENST00000521331 ESDP10768 282 aa9.22□□□□□ -0.93
PRKDC-204ENST00000521331 CD164L2Q6UWJ8 174 aa9.22□□□□□ -0.93
PRKDC-204ENST00000521331 OCC1Q8TAD7 63 aa9.22□□□□□ -0.93
PRKDC-204ENST00000521331 LINC00526Q96FQ7 95 aa9.22□□□□□ -0.93
PRKDC-204ENST00000521331 NAT8Q9UHE5 227 aa9.22□□□□□ -0.93
PRKDC-204ENST00000521331 TGIF2-C20orf24A0A0A6YYL0 155 aa9.21□□□□□ -0.94
PRKDC-204ENST00000521331 PPP1R2P9O14990 202 aa9.21□□□□□ -0.94
PRKDC-204ENST00000521331 PTTG1IPP53801 180 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms