RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 I3L2K1 104 aa-0.88□□□□□ -2.55
NPM1-206ENST00000519955 TMEM170BQ5T4T1 132 aa-0.88□□□□□ -2.55
NPM1-206ENST00000519955 RERGLQ9H628 205 aa-0.88□□□□□ -2.55
NPM1-206ENST00000519955 SERP1Q9Y6X1 66 aa-0.88□□□□□ -2.55
NPM1-206ENST00000519955 Q6AWC8 147 aa-0.89□□□□□ -2.55
NPM1-206ENST00000519955 LSM10Q969L4 123 aaKnown RBP-0.89□□□□□ -2.55
NPM1-206ENST00000519955 SPTBN1Q01082 2364 aaKnown RBP-0.89□□□□□ -2.55
NPM1-206ENST00000519955 COL6A3P12111 3177 aa-0.89□□□□□ -2.55
NPM1-206ENST00000519955 MAP1AP78559 2803 aaPredicted RBP-0.89□□□□□ -2.55
NPM1-206ENST00000519955 ACANP16112 2415 aa-0.9□□□□□ -2.55
NPM1-206ENST00000519955 PCLOQ9Y6V0 5065 aa-0.9□□□□□ -2.55
NPM1-206ENST00000519955 SNRNP25Q9BV90 132 aaKnown RBP-0.9□□□□□ -2.55
NPM1-206ENST00000519955 PATJQ8NI35 1801 aa-0.91□□□□□ -2.55
NPM1-206ENST00000519955 FXYD6-FXYD2A0A087WZ82 144 aa-0.91□□□□□ -2.56
NPM1-206ENST00000519955 TRBV6-1A0A0K0K1D8 114 aa-0.91□□□□□ -2.56
NPM1-206ENST00000519955 PIGYQ3MUY2 71 aa-0.91□□□□□ -2.56
NPM1-206ENST00000519955 NBEAL1Q6ZS30 2694 aa-0.91□□□□□ -2.56
NPM1-206ENST00000519955 HERC2O95714 4834 aa-0.91□□□□□ -2.56
NPM1-206ENST00000519955 MAP1BP46821 2468 aaKnown RBP-0.91□□□□□ -2.56
NPM1-206ENST00000519955 DOCK1Q14185 1865 aa-0.92□□□□□ -2.56
NPM1-206ENST00000519955 SELENOWP63302 87 aa-0.92□□□□□ -2.56
NPM1-206ENST00000519955 Q6JHZ5 121 aa-0.92□□□□□ -2.56
NPM1-206ENST00000519955 BAGE2Q86Y30 109 aa-0.92□□□□□ -2.56
NPM1-206ENST00000519955 ZNF236Q9UL36 1845 aa-0.92□□□□□ -2.56
NPM1-206ENST00000519955 PIEZO2Q9H5I5 2752 aa-0.92□□□□□ -2.56
NPM1-206ENST00000519955 UQCR11O14957 56 aa-0.93□□□□□ -2.56
NPM1-206ENST00000519955 PI4KAP42356 2102 aa-0.93□□□□□ -2.56
NPM1-206ENST00000519955 LINC00472Q9H8W2 130 aa-0.93□□□□□ -2.56
NPM1-206ENST00000519955 USF3Q68DE3 2245 aa-0.93□□□□□ -2.56
NPM1-206ENST00000519955 TPPP2P59282 170 aa-0.94□□□□□ -2.56
NPM1-206ENST00000519955 ARL11Q969Q4 196 aa-0.94□□□□□ -2.56
NPM1-206ENST00000519955 NAA60Q9H7X0 242 aa-0.94□□□□□ -2.56
NPM1-206ENST00000519955 NDUFA4L2Q9NRX3 87 aa-0.94□□□□□ -2.56
NPM1-206ENST00000519955 F8VRH5 84 aa-0.95□□□□□ -2.56
NPM1-206ENST00000519955 APOC3P02656 99 aa-0.95□□□□□ -2.56
NPM1-206ENST00000519955 DOCK2Q92608 1830 aa-0.95□□□□□ -2.56
NPM1-206ENST00000519955 BSNQ9UPA5 3926 aa-0.96□□□□□ -2.56
NPM1-206ENST00000519955 BICRAQ9NZM4 1560 aa-0.96□□□□□ -2.56
NPM1-206ENST00000519955 LAMA5O15230 3695 aa-0.96□□□□□ -2.56
NPM1-206ENST00000519955 MGST2Q99735 147 aa-0.96□□□□□ -2.56
NPM1-206ENST00000519955 LINC00470Q9BZP3 86 aa-0.96□□□□□ -2.56
NPM1-206ENST00000519955 DYNLRB1Q9NP97 96 aa-0.96□□□□□ -2.56
NPM1-206ENST00000519955 FAT2Q9NYQ8 4349 aa-0.96□□□□□ -2.56
NPM1-206ENST00000519955 PAPPAQ13219 1627 aa-0.97□□□□□ -2.56
NPM1-206ENST00000519955 KIF21AQ7Z4S6 1674 aa-0.97□□□□□ -2.56
NPM1-206ENST00000519955 FAM25AB3EWG3 89 aa-0.97□□□□□ -2.56
NPM1-206ENST00000519955 FAM25CB3EWG5 89 aa-0.97□□□□□ -2.56
NPM1-206ENST00000519955 FAM25GB3EWG6 89 aa-0.97□□□□□ -2.56
NPM1-206ENST00000519955 KRTAP19-8Q3LI54 63 aa-0.97□□□□□ -2.56
NPM1-206ENST00000519955 MEIG1Q5JSS6 88 aa-0.97□□□□□ -2.56
NPM1-206ENST00000519955 WNK1Q9H4A3 2382 aa-0.97□□□□□ -2.56
NPM1-206ENST00000519955 TRBV7-3A0A075B6L6 115 aa-0.98□□□□□ -2.57
NPM1-206ENST00000519955 K7EQZ3 153 aa-0.98□□□□□ -2.57
NPM1-206ENST00000519955 PPP3R2Q96LZ3 170 aa-0.98□□□□□ -2.57
NPM1-206ENST00000519955 NEBP20929 6669 aa-0.98□□□□□ -2.57
NPM1-206ENST00000519955 SBF2Q86WG5 1849 aa-0.99□□□□□ -2.57
NPM1-206ENST00000519955 CSPG4Q6UVK1 2322 aa-0.99□□□□□ -2.57
NPM1-206ENST00000519955 KRTAP20-2Q3LI61 65 aa-0.99□□□□□ -2.57
NPM1-206ENST00000519955 MYO7BQ6PIF6 2116 aa-1□□□□□ -2.57
NPM1-206ENST00000519955 TNFP01375 233 aa-1□□□□□ -2.57
NPM1-206ENST00000519955 LINC01558Q9Y6Z2 57 aa-1□□□□□ -2.57
NPM1-206ENST00000519955 FLNBO75369 2602 aaKnown RBP-1□□□□□ -2.57
NPM1-206ENST00000519955 RIMS1Q86UR5 1692 aaKnown RBP-1□□□□□ -2.57
NPM1-206ENST00000519955 IGLC7A0M8Q6 106 aa-1.01□□□□□ -2.57
NPM1-206ENST00000519955 COX6B1P14854 86 aa-1.01□□□□□ -2.57
NPM1-206ENST00000519955 BTG2P78543 158 aa-1.01□□□□□ -2.57
NPM1-206ENST00000519955 Q56UQ5 140 aa-1.01□□□□□ -2.57
NPM1-206ENST00000519955 GNG7O60262 68 aa-1.02□□□□□ -2.57
NPM1-206ENST00000519955 CCDC58Q4VC31 144 aa-1.02□□□□□ -2.57
NPM1-206ENST00000519955 SPANXDQ9BXN6 97 aa-1.02□□□□□ -2.57
NPM1-206ENST00000519955 WDR7Q9Y4E6 1490 aa-1.02□□□□□ -2.57
NPM1-206ENST00000519955 EP300Q09472 2414 aaPredicted RBP-1.03□□□□□ -2.57
NPM1-206ENST00000519955 SHANK2Q9UPX8 1470 aa-1.03□□□□□ -2.57
NPM1-206ENST00000519955 CPSF1Q10570 1443 aaKnown RBP-1.03□□□□□ -2.57
NPM1-206ENST00000519955 LOC285095A0A1B0GVY8 99 aa-1.03□□□□□ -2.57
NPM1-206ENST00000519955 TSLPQ969D9 159 aa-1.03□□□□□ -2.57
NPM1-206ENST00000519955 MIF4GDA9UHW6 222 aaKnown RBP-1.04□□□□□ -2.58
NPM1-206ENST00000519955 HMGN4O00479 90 aa-1.04□□□□□ -2.58
NPM1-206ENST00000519955 NAIPQ13075 1403 aa-1.05□□□□□ -2.58
NPM1-206ENST00000519955 TGP01266 2768 aa-1.05□□□□□ -2.58
NPM1-206ENST00000519955 SPRR1BP22528 89 aa-1.05□□□□□ -2.58
NPM1-206ENST00000519955 SPRR2BP35325 72 aa-1.05□□□□□ -2.58
NPM1-206ENST00000519955 MT4P47944 62 aa-1.05□□□□□ -2.58
NPM1-206ENST00000519955 GVINP1Q7Z2Y8 2422 aa-1.05□□□□□ -2.58
NPM1-206ENST00000519955 USH2AO75445 5202 aa-1.05□□□□□ -2.58
NPM1-206ENST00000519955 FLGP20930 4061 aaPredicted RBP-1.06□□□□□ -2.58
NPM1-206ENST00000519955 NDUFA2O43678 99 aa-1.06□□□□□ -2.58
NPM1-206ENST00000519955 C8orf59Q8N0T1 100 aaPredicted RBP-1.06□□□□□ -2.58
NPM1-206ENST00000519955 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.06□□□□□ -2.58
NPM1-206ENST00000519955 HIVEP1P15822 2718 aa-1.07□□□□□ -2.58
NPM1-206ENST00000519955 SSSCA1O60232 199 aa-1.07□□□□□ -2.58
NPM1-206ENST00000519955 APOC2P02655 101 aa-1.07□□□□□ -2.58
NPM1-206ENST00000519955 DEFB123Q8N688 67 aa-1.07□□□□□ -2.58
NPM1-206ENST00000519955 DOPEY1Q5JWR5 2465 aa-1.07□□□□□ -2.58
NPM1-206ENST00000519955 PHLPP1O60346 1717 aa-1.07□□□□□ -2.58
NPM1-206ENST00000519955 PKHD1P08F94 4074 aa-1.07□□□□□ -2.58
NPM1-206ENST00000519955 SFT2D2O95562 160 aa-1.08□□□□□ -2.58
NPM1-206ENST00000519955 FGF7P21781 194 aa-1.08□□□□□ -2.58
NPM1-206ENST00000519955 CATR1Q13166 79 aa-1.08□□□□□ -2.58
NPM1-206ENST00000519955 RAPGEF6Q8TEU7 1601 aa-1.08□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms