RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 K7EQM0 130 aa3.33□□□□□ -1.88
CTNNA1-216ENST00000519489 SFT2D2O95562 160 aa3.33□□□□□ -1.88
CTNNA1-216ENST00000519489 SPRR2DP22532 72 aa3.33□□□□□ -1.88
CTNNA1-216ENST00000519489 SSTP61278 116 aa3.33□□□□□ -1.88
CTNNA1-216ENST00000519489 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
CTNNA1-216ENST00000519489 LINC00167Q96N53 147 aa3.33□□□□□ -1.88
CTNNA1-216ENST00000519489 SPRR2FQ96RM1 72 aa3.33□□□□□ -1.88
CTNNA1-216ENST00000519489 PRRT1Q99946 306 aa3.33□□□□□ -1.88
CTNNA1-216ENST00000519489 MARVELD1Q9BSK0 173 aa3.33□□□□□ -1.88
CTNNA1-216ENST00000519489 VCXQ9H320 206 aa3.33□□□□□ -1.88
CTNNA1-216ENST00000519489 CHTOPQ9Y3Y2 248 aaKnown RBP3.33□□□□□ -1.88
CTNNA1-216ENST00000519489 IGSF23A1L1A6 192 aa3.32□□□□□ -1.88
CTNNA1-216ENST00000519489 A6NN06 94 aa3.32□□□□□ -1.88
CTNNA1-216ENST00000519489 SLC25A20O43772 301 aa3.32□□□□□ -1.88
CTNNA1-216ENST00000519489 AKAIN1P0CW23 69 aa3.32□□□□□ -1.88
CTNNA1-216ENST00000519489 UBE2AP49459 152 aa3.32□□□□□ -1.88
CTNNA1-216ENST00000519489 COTL1Q14019 142 aa3.32□□□□□ -1.88
CTNNA1-216ENST00000519489 TMEM128Q5BJH2 165 aa3.32□□□□□ -1.88
CTNNA1-216ENST00000519489 LINC00469Q8N7U9 141 aa3.32□□□□□ -1.88
CTNNA1-216ENST00000519489 THAP6Q8TBB0 222 aa3.32□□□□□ -1.88
CTNNA1-216ENST00000519489 BLOC1S6Q9UL45 172 aa3.32□□□□□ -1.88
CTNNA1-216ENST00000519489 ARL2-SNX15V9GYD0 113 aa3.32□□□□□ -1.88
CTNNA1-216ENST00000519489 GAGE10A6NGK3 116 aa3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 UBE2G2P60604 165 aa3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 RPS29P62273 56 aaKnown RBP3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 LSM3P62310 102 aaKnown RBP3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 KIAA0087Q14695 138 aa3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 LBHQ53QV2 105 aaPredicted RBP3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 FAM74A1Q5RGS3 127 aa3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 MRPL55Q7Z7F7 128 aaKnown RBP3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 FAM19A2Q8N3H0 131 aa3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 XAGE1AQ9HD64 81 aa3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 CDC42SE2Q9NRR3 84 aa3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 MCUBQ9NWR8 336 aa3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 GSKIPQ9P0R6 139 aa3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 EXTL2Q9UBQ6 330 aa3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 SCP2D1Q9UJQ7 156 aa3.31□□□□□ -1.88
CTNNA1-216ENST00000519489 IFITM10A6NMD0 228 aa3.3□□□□□ -1.88
CTNNA1-216ENST00000519489 NDUFC2-KCTD14E9PQ53 114 aa3.3□□□□□ -1.88
CTNNA1-216ENST00000519489 NDUFA1O15239 70 aa3.3□□□□□ -1.88
CTNNA1-216ENST00000519489 BCAP31P51572 246 aa3.3□□□□□ -1.88
CTNNA1-216ENST00000519489 SAPCD1Q5SSQ6 148 aa3.3□□□□□ -1.88
CTNNA1-216ENST00000519489 ORAOV1Q8WV07 137 aa3.3□□□□□ -1.88
CTNNA1-216ENST00000519489 PACRGQ96M98 296 aaPredicted RBP3.3□□□□□ -1.88
CTNNA1-216ENST00000519489 SPRR4Q96PI1 79 aa3.3□□□□□ -1.88
CTNNA1-216ENST00000519489 ANKRD20A5PA0PJZ0 165 aa3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 SNAI2O43623 268 aa3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 MGPP08493 103 aa3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 OR5AL1P0C617 328 aa3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 AQP4P55087 323 aa3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 TMEM241Q24JQ0 296 aa3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 IAH1Q2TAA2 248 aaPredicted RBP3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 RNASE13Q5GAN3 156 aaKnown RBP3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 RASL11AQ6T310 242 aa3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 C2orf82Q6UX34 121 aa3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 C5orf17Q8NAS9 161 aa3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 OR10D4PQ8NGN7 298 aa3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 CNBD2Q96M20 576 aa3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 TP73-AS1Q9UF72 201 aa3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 EPDR1Q9UM22 224 aa3.29□□□□□ -1.88
CTNNA1-216ENST00000519489 SERTM2A0A1B0GWG4 89 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 PRSS47A8MTI9 375 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 H3BMQ9 156 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 L7N2F9 121 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 HMGB3O15347 200 aaKnown RBP3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 SCO1O75880 301 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 IGLV6-57P01721 117 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 VAMP2P63027 116 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 PNRC1Q12796 327 aaPredicted RBP3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 LRRC37A5PQ49AS3 106 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 KHDC3LQ587J8 217 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 COX8CQ7Z4L0 72 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 TMEM252Q8N6L7 170 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 SMIM4Q8WVI0 70 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 NIT2Q9NQR4 276 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 ALG5Q9Y673 324 aa3.28□□□□□ -1.88
CTNNA1-216ENST00000519489 C20orf202A1L168 122 aa3.27□□□□□ -1.89
CTNNA1-216ENST00000519489 H7C423 109 aa3.27□□□□□ -1.89
CTNNA1-216ENST00000519489 ZNF25P17030 456 aaPredicted RBP3.27□□□□□ -1.89
CTNNA1-216ENST00000519489 SULT1A1P50225 295 aa3.27□□□□□ -1.89
CTNNA1-216ENST00000519489 SSBP1Q04837 148 aaKnown RBP3.27□□□□□ -1.89
CTNNA1-216ENST00000519489 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
CTNNA1-216ENST00000519489 C15orf40Q8WUR7 153 aa3.27□□□□□ -1.89
CTNNA1-216ENST00000519489 C20orf166-AS1Q96NR2 134 aa3.27□□□□□ -1.89
CTNNA1-216ENST00000519489 SLC25A21Q9BQT8 299 aaPredicted RBP3.27□□□□□ -1.89
CTNNA1-216ENST00000519489 C9orf170A2RU37 121 aa3.26□□□□□ -1.89
CTNNA1-216ENST00000519489 UPK1BO75841 260 aa3.26□□□□□ -1.89
CTNNA1-216ENST00000519489 S100A11P31949 105 aa3.26□□□□□ -1.89
CTNNA1-216ENST00000519489 FOXA3P55318 350 aaPredicted RBP3.26□□□□□ -1.89
CTNNA1-216ENST00000519489 NEDD8Q15843 81 aa3.26□□□□□ -1.89
CTNNA1-216ENST00000519489 URB1-AS1Q96HZ7 61 aa3.26□□□□□ -1.89
CTNNA1-216ENST00000519489 TRAV13-1A0A0B4J241 112 aa3.25□□□□□ -1.89
CTNNA1-216ENST00000519489 C1orf196B1AJZ1 125 aa3.25□□□□□ -1.89
CTNNA1-216ENST00000519489 TMEM238C9JI98 176 aa3.25□□□□□ -1.89
CTNNA1-216ENST00000519489 F8WDY8 70 aa3.25□□□□□ -1.89
CTNNA1-216ENST00000519489 ARL14EPLP0DKL9 152 aa3.25□□□□□ -1.89
CTNNA1-216ENST00000519489 RPS20P60866 119 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-216ENST00000519489 SPANXN1Q5VSR9 72 aa3.25□□□□□ -1.89
CTNNA1-216ENST00000519489 LYZL1Q6UWQ5 148 aa3.25□□□□□ -1.89
CTNNA1-216ENST00000519489 MCFD2Q8NI22 146 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms