RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 NSUN5P1Q3KNT7 163 aa3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 HIGD2BQ4VC39 106 aa3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 SLC25A34Q6PIV7 304 aa3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 C11orf72Q8NBR9 251 aa3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 ZNF418Q8TF45 676 aaPredicted RBP3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 TOMM6Q96B49 74 aa3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 LINC00467Q9BRT7 94 aa3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 GEMIN7Q9H840 131 aaKnown RBP3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 SETXQ7Z333 2677 aaKnown RBP3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 NIPBLQ6KC79 2804 aaeCLIP3.38□□□□□ -1.87
CTNNA1-212ENST00000518919 DNAH3Q8TD57 4116 aa3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 C2CD3Q4AC94 2353 aa3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 IGKV2D-26A0A0A0MRZ7 120 aa3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 KRTAP16-1A8MUX0 517 aa3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 M0QY20 66 aa3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 INSP01308 110 aa3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 HINT1P49773 126 aaPredicted RBP3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 RIPPLY3P57055 190 aa3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 TCTAP57738 103 aa3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 ZNF56Q15929 161 aa3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 ORMDL2Q53FV1 153 aa3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 FAM74A4Q5TZK3 123 aa3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 WFDC10AQ9H1F0 79 aa3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 EDA2RQ9HAV5 297 aa3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 MRPL35Q9NZE8 188 aaKnown RBP3.37□□□□□ -1.87
CTNNA1-212ENST00000518919 HIVEP1P15822 2718 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 IGLV8-61A0A075B6I0 122 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 A0A087WX48 190 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 TRAV12-1A0A0B4J245 112 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 TRBV27A0A0K0K1C4 114 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 SDHAF1A6NFY7 115 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 OR11H12B2RN74 326 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 K7EMI3 77 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 M0R2P5 195 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 DPM2O94777 84 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 PPP1R17O96001 155 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 IGLV1-51P01701 117 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 IGKCP01834 107 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 GIG44P09565 113 aaPredicted RBP3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 P0DMU3 169 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 FAM231AP0DMU4 169 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 FAM231CP0DMU5 169 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 MT3P25713 68 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 Q1RN00 199 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 COL5A1-AS1Q5SY13 56 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 BVES-AS1Q5T3Y7 98 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 ZFP2Q6ZN57 461 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 KRTAP7-1Q8IUC3 87 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 PCP2Q8IVA1 136 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 BOD1L2Q8IYS8 172 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 C1orf158Q8N1D5 194 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 DEFB104AQ8WTQ1 72 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 BAALCQ8WXS3 180 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 PTH2Q96A98 100 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 SCGB3A1Q96QR1 104 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 KIR2DL4Q99706 377 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 MRPL16Q9NX20 251 aaKnown RBP3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 HHLA3Q9XRX5 114 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 TP53TG1Q9Y2A0 90 aa3.36□□□□□ -1.87
CTNNA1-212ENST00000518919 IGLV4-69A0A075B6H9 119 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 IGIPA6NJ69 53 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 F8VRH5 84 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 DLEU1O43261 78 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 AZU1P20160 251 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 NMUP48645 174 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 RPL39P62891 51 aaKnown RBP3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 RHOHQ15669 191 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 PRR4Q16378 134 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 MPV17L2Q567V2 206 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 CFAP126Q5VTH2 177 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 Q6ZVH6 145 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 GTSCR1Q86UQ5 136 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 NDUFA11Q86Y39 141 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 LINC00469Q8N7U9 141 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 SPATA3Q8NHX4 192 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 CHCHD10Q8WYQ3 142 aaPredicted RBP3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 VSIG2Q96IQ7 327 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 LINC01587Q99440 93 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 TTTY13Q9BZ97 58 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 XCL2Q9UBD3 114 aa3.35□□□□□ -1.87
CTNNA1-212ENST00000518919 IGHV3-73A0A0B4J1V6 119 aa3.34□□□□□ -1.87
CTNNA1-212ENST00000518919 PLAC8L1A1L4L8 177 aa3.34□□□□□ -1.87
CTNNA1-212ENST00000518919 A8MWV9 139 aa3.34□□□□□ -1.87
CTNNA1-212ENST00000518919 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.34□□□□□ -1.87
CTNNA1-212ENST00000518919 H7C1H1 209 aa3.34□□□□□ -1.87
CTNNA1-212ENST00000518919 HTN1P15515 57 aa3.34□□□□□ -1.87
CTNNA1-212ENST00000518919 PLNP26678 52 aa3.34□□□□□ -1.87
CTNNA1-212ENST00000518919 G0S2P27469 103 aa3.34□□□□□ -1.87
CTNNA1-212ENST00000518919 MRPL23Q16540 153 aaKnown RBP3.34□□□□□ -1.87
CTNNA1-212ENST00000518919 TIMM17AQ99595 171 aa3.34□□□□□ -1.87
CTNNA1-212ENST00000518919 Q9UF83 564 aa3.34□□□□□ -1.87
CTNNA1-212ENST00000518919 CYSLTR1Q9Y271 337 aa3.34□□□□□ -1.87
CTNNA1-212ENST00000518919 CHTOPQ9Y3Y2 248 aaKnown RBP3.34□□□□□ -1.87
CTNNA1-212ENST00000518919 VWFP04275 2813 aa3.34□□□□□ -1.88
CTNNA1-212ENST00000518919 NACAE9PAV3 2078 aa3.33□□□□□ -1.88
CTNNA1-212ENST00000518919 C11orf86A6NJI1 115 aa3.33□□□□□ -1.88
CTNNA1-212ENST00000518919 TAX1BP3O14907 124 aa3.33□□□□□ -1.88
CTNNA1-212ENST00000518919 ZNF25P17030 456 aaPredicted RBP3.33□□□□□ -1.88
CTNNA1-212ENST00000518919 HSD52Q0P140 79 aa3.33□□□□□ -1.88
CTNNA1-212ENST00000518919 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms