RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 HBDP02042 147 aa12.3□□□□□ -0.44
TFF3-204ENST00000518498 INAFM2P0DMQ5 153 aa12.3□□□□□ -0.44
TFF3-204ENST00000518498 LINC00310P59036 64 aa12.3□□□□□ -0.44
TFF3-204ENST00000518498 PKIAP61925 76 aa12.3□□□□□ -0.44
TFF3-204ENST00000518498 LYPD5Q6UWN5 251 aa12.3□□□□□ -0.44
TFF3-204ENST00000518498 NTM-AS1Q6ZSK4 140 aa12.3□□□□□ -0.44
TFF3-204ENST00000518498 CYSLTR1Q9Y271 337 aa12.3□□□□□ -0.44
TFF3-204ENST00000518498 C20orf203Q8NBC4 194 aa12.29□□□□□ -0.44
TFF3-204ENST00000518498 CHCHD7Q9BUK0 85 aa12.29□□□□□ -0.44
TFF3-204ENST00000518498 TRAV8-6A0A0B4J262 113 aa12.28□□□□□ -0.44
TFF3-204ENST00000518498 UBE2L6O14933 153 aa12.28□□□□□ -0.44
TFF3-204ENST00000518498 FUSP35637 526 aaKnown RBP eCLIP12.28□□□□□ -0.44
TFF3-204ENST00000518498 CDPF1Q6NVV7 123 aa12.28□□□□□ -0.44
TFF3-204ENST00000518498 C5orf52A6NGY3 159 aa12.27□□□□□ -0.45
TFF3-204ENST00000518498 NUPR1O60356 82 aa12.27□□□□□ -0.45
TFF3-204ENST00000518498 S100A2P29034 98 aa12.27□□□□□ -0.45
TFF3-204ENST00000518498 XGP55808 180 aa12.27□□□□□ -0.45
TFF3-204ENST00000518498 SNRPEP62304 92 aaKnown RBP12.27□□□□□ -0.45
TFF3-204ENST00000518498 C2orf66Q6UXQ4 117 aa12.27□□□□□ -0.45
TFF3-204ENST00000518498 NFE4Q86UQ8 179 aa12.27□□□□□ -0.45
TFF3-204ENST00000518498 DEFB104AQ8WTQ1 72 aa12.27□□□□□ -0.45
TFF3-204ENST00000518498 PACRGQ96M98 296 aaPredicted RBP12.27□□□□□ -0.45
TFF3-204ENST00000518498 TRAV9-2A0A087WT02 112 aa12.26□□□□□ -0.45
TFF3-204ENST00000518498 TOMM6Q96B49 74 aa12.26□□□□□ -0.45
TFF3-204ENST00000518498 CHCHD5Q9BSY4 110 aa12.26□□□□□ -0.45
TFF3-204ENST00000518498 FAM19A2Q8N3H0 131 aa12.25□□□□□ -0.45
TFF3-204ENST00000518498 TIMM21Q9BVV7 248 aa12.25□□□□□ -0.45
TFF3-204ENST00000518498 PMCHL1Q16048 86 aa12.24□□□□□ -0.45
TFF3-204ENST00000518498 HIST3H2BBQ8N257 126 aa12.24□□□□□ -0.45
TFF3-204ENST00000518498 SPANXA1Q9NS26 97 aa12.24□□□□□ -0.45
TFF3-204ENST00000518498 HSPB8Q9UJY1 196 aa12.24□□□□□ -0.45
TFF3-204ENST00000518498 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.23□□□□□ -0.45
TFF3-204ENST00000518498 A0A087WTM6 91 aa12.23□□□□□ -0.45
TFF3-204ENST00000518498 A0A096LNJ9 63 aa12.23□□□□□ -0.45
TFF3-204ENST00000518498 IGKV2-29A2NJV5 120 aaPredicted RBP12.23□□□□□ -0.45
TFF3-204ENST00000518498 ATP5LO75964 103 aa12.23□□□□□ -0.45
TFF3-204ENST00000518498 LEPROTL1O95214 131 aa12.23□□□□□ -0.45
TFF3-204ENST00000518498 NPSP0C0P6 89 aa12.23□□□□□ -0.45
TFF3-204ENST00000518498 ZNF25P17030 456 aaPredicted RBP12.23□□□□□ -0.45
TFF3-204ENST00000518498 PDZD11Q5EBL8 140 aa12.23□□□□□ -0.45
TFF3-204ENST00000518498 AMMECR1LQ6DCA0 310 aa12.23□□□□□ -0.45
TFF3-204ENST00000518498 MRPL52Q86TS9 123 aaKnown RBP12.23□□□□□ -0.45
TFF3-204ENST00000518498 SCGB3A1Q96QR1 104 aa12.23□□□□□ -0.45
TFF3-204ENST00000518498 PYGO1Q9Y3Y4 419 aa12.23□□□□□ -0.45
TFF3-204ENST00000518498 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
TFF3-204ENST00000518498 PAPPA-AS1Q5QFB9 102 aa12.22□□□□□ -0.45
TFF3-204ENST00000518498 Q5VSD8 79 aa12.22□□□□□ -0.45
TFF3-204ENST00000518498 DGAT2L7PQ6IED9 249 aa12.22□□□□□ -0.45
TFF3-204ENST00000518498 ERASQ7Z444 233 aa12.22□□□□□ -0.45
TFF3-204ENST00000518498 TMEM141Q96I45 108 aa12.22□□□□□ -0.45
TFF3-204ENST00000518498 TMEM101Q96IK0 257 aa12.22□□□□□ -0.45
TFF3-204ENST00000518498 TIMM17AQ99595 171 aa12.22□□□□□ -0.45
TFF3-204ENST00000518498 CSDC2Q9Y534 153 aaKnown RBP12.22□□□□□ -0.45
TFF3-204ENST00000518498 DNAH10OSP0CZ25 163 aa12.21□□□□□ -0.45
TFF3-204ENST00000518498 FGF6P10767 208 aa12.21□□□□□ -0.45
TFF3-204ENST00000518498 KRTAP10-1P60331 282 aa12.21□□□□□ -0.45
TFF3-204ENST00000518498 UBE2D4Q9Y2X8 147 aa12.21□□□□□ -0.45
TFF3-204ENST00000518498 A0A1B0GUV1 79 aa12.2□□□□□ -0.46
TFF3-204ENST00000518498 TMEM262E9PQX1 116 aa12.2□□□□□ -0.46
TFF3-204ENST00000518498 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.2□□□□□ -0.46
TFF3-204ENST00000518498 K7EP13 123 aa12.2□□□□□ -0.46
TFF3-204ENST00000518498 GAGE6Q13070 117 aa12.2□□□□□ -0.46
TFF3-204ENST00000518498 A0A087WX48 190 aa12.19□□□□□ -0.46
TFF3-204ENST00000518498 OR5A1Q8NGJ0 315 aa12.19□□□□□ -0.46
TFF3-204ENST00000518498 IGIPA6NJ69 53 aa12.18□□□□□ -0.46
TFF3-204ENST00000518498 FABP4P15090 132 aa12.18□□□□□ -0.46
TFF3-204ENST00000518498 MRPS36P82909 103 aaKnown RBP12.18□□□□□ -0.46
TFF3-204ENST00000518498 Q6ZN92 141 aa12.18□□□□□ -0.46
TFF3-204ENST00000518498 IFI27L1Q96BM0 104 aa12.18□□□□□ -0.46
TFF3-204ENST00000518498 HIST1H2BLQ99880 126 aa12.18□□□□□ -0.46
TFF3-204ENST00000518498 SMR3BP02814 79 aaPredicted RBP12.17□□□□□ -0.46
TFF3-204ENST00000518498 GCSHP23434 173 aa12.17□□□□□ -0.46
TFF3-204ENST00000518498 WFDC10BQ8IUB3 73 aa12.16□□□□□ -0.46
TFF3-204ENST00000518498 MAP1LC3CQ9BXW4 147 aa12.16□□□□□ -0.46
TFF3-204ENST00000518498 HERC1Q15751 4861 aa12.16□□□□□ -0.46
TFF3-204ENST00000518498 FAM229AH3BQW9 127 aa12.15□□□□□ -0.46
TFF3-204ENST00000518498 RBX1P62877 108 aa12.15□□□□□ -0.46
TFF3-204ENST00000518498 MPV17L2Q567V2 206 aa12.15□□□□□ -0.46
TFF3-204ENST00000518498 LINC01556Q5JQF7 62 aa12.15□□□□□ -0.46
TFF3-204ENST00000518498 IGLV4-3A0A075B6K6 122 aa12.14□□□□□ -0.47
TFF3-204ENST00000518498 ZNF664Q8N3J9 261 aa12.14□□□□□ -0.47
TFF3-204ENST00000518498 VCX2Q9H322 139 aa12.14□□□□□ -0.47
TFF3-204ENST00000518498 CDC42SE2Q9NRR3 84 aa12.14□□□□□ -0.47
TFF3-204ENST00000518498 PRSS1P07477 247 aa12.13□□□□□ -0.47
TFF3-204ENST00000518498 TEX43Q6ZNM6 134 aa12.13□□□□□ -0.47
TFF3-204ENST00000518498 C2orf88Q9BSF0 95 aa12.13□□□□□ -0.47
TFF3-204ENST00000518498 IFITM10A6NMD0 228 aa12.12□□□□□ -0.47
TFF3-204ENST00000518498 C10orf126Q8N4M7 172 aa12.12□□□□□ -0.47
TFF3-204ENST00000518498 IGLV4-60A0A075B6I1 120 aa12.11□□□□□ -0.47
TFF3-204ENST00000518498 ANGP03950 147 aaKnown RBP12.11□□□□□ -0.47
TFF3-204ENST00000518498 PMVKQ15126 192 aa12.11□□□□□ -0.47
TFF3-204ENST00000518498 Q6ZUT4 128 aa12.11□□□□□ -0.47
TFF3-204ENST00000518498 LINC00173Q6ZV60 143 aa12.11□□□□□ -0.47
TFF3-204ENST00000518498 Q8N976 141 aa12.11□□□□□ -0.47
TFF3-204ENST00000518498 BAALCQ8WXS3 180 aa12.11□□□□□ -0.47
TFF3-204ENST00000518498 AMELXQ99217 191 aa12.11□□□□□ -0.47
TFF3-204ENST00000518498 TRAV12-1A0A0B4J245 112 aa12.1□□□□□ -0.47
TFF3-204ENST00000518498 PSCAO43653 123 aa12.1□□□□□ -0.47
TFF3-204ENST00000518498 IGHV3-30P01768 117 aa12.1□□□□□ -0.47
TFF3-204ENST00000518498 IGHV3-33P01772 117 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms