RNA–Protein interactions for RNA: ENST00000518381.5

CTNNA1-208, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-208ENST00000518381 SMIM15Q7Z3B0 74 aa4.1□□□□□ -1.75
CTNNA1-208ENST00000518381 AMN1Q8IY45 258 aa4.1□□□□□ -1.75
CTNNA1-208ENST00000518381 GATD1Q8NB37 220 aa4.1□□□□□ -1.75
CTNNA1-208ENST00000518381 C7orf33Q8WU49 177 aa4.1□□□□□ -1.75
CTNNA1-208ENST00000518381 ANAPC16Q96DE5 110 aa4.1□□□□□ -1.75
CTNNA1-208ENST00000518381 RPL39LQ96EH5 51 aaKnown RBP4.1□□□□□ -1.75
CTNNA1-208ENST00000518381 DPH3Q96FX2 82 aa4.1□□□□□ -1.75
CTNNA1-208ENST00000518381 RPS10P5Q9NQ39 176 aa4.1□□□□□ -1.75
CTNNA1-208ENST00000518381 LPAP08519 4548 aa4.09□□□□□ -1.75
CTNNA1-208ENST00000518381 TRBV7-3A0A075B6L6 115 aa4.09□□□□□ -1.75
CTNNA1-208ENST00000518381 RAB4AP20338 218 aa4.09□□□□□ -1.75
CTNNA1-208ENST00000518381 UBE2D3P61077 147 aa4.09□□□□□ -1.75
CTNNA1-208ENST00000518381 UBE2D2P62837 147 aa4.09□□□□□ -1.75
CTNNA1-208ENST00000518381 RPL36AP83881 106 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-208ENST00000518381 RASL11AQ6T310 242 aa4.09□□□□□ -1.75
CTNNA1-208ENST00000518381 REG3GQ6UW15 175 aa4.09□□□□□ -1.75
CTNNA1-208ENST00000518381 CLRN3Q8NCR9 226 aa4.09□□□□□ -1.75
CTNNA1-208ENST00000518381 RPL36ALQ969Q0 106 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-208ENST00000518381 TMEM191AQ9H0A3 160 aa4.09□□□□□ -1.75
CTNNA1-208ENST00000518381 CARHSP1Q9Y2V2 147 aaKnown RBP4.09□□□□□ -1.75
CTNNA1-208ENST00000518381 A0A087WYN8 130 aa4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 TRBV10-1A0A0K0K1A3 114 aa4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 PHOX2AO14813 284 aa4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 NCR2O95944 276 aa4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 HLA-DQA1P01909 254 aa4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 CRPP02741 224 aa4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 RPS10P46783 165 aaKnown RBP4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 MRPL51Q4U2R6 128 aaKnown RBP4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 ANKRD39Q53RE8 183 aa4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 FAM104BQ5XKR9 115 aa4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 NTM-AS1Q6ZSK4 140 aa4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 CTDSP1Q9GZU7 261 aa4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 NIT2Q9NQR4 276 aa4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
CTNNA1-208ENST00000518381 IGHV3-64A0A075B6Q5 118 aa4.07□□□□□ -1.76
CTNNA1-208ENST00000518381 A0A1B0GXF2 115 aa4.07□□□□□ -1.76
CTNNA1-208ENST00000518381 H7C1H1 209 aa4.07□□□□□ -1.76
CTNNA1-208ENST00000518381 CNBPP62633 177 aaKnown RBP4.07□□□□□ -1.76
CTNNA1-208ENST00000518381 SPINK6Q6UWN8 80 aa4.07□□□□□ -1.76
CTNNA1-208ENST00000518381 ENHOQ6UWT2 76 aa4.07□□□□□ -1.76
CTNNA1-208ENST00000518381 PLAC8Q9NZF1 115 aa4.07□□□□□ -1.76
CTNNA1-208ENST00000518381 MUC2Q02817 5179 aa4.07□□□□□ -1.76
CTNNA1-208ENST00000518381 TRBV6-8A0A0A6YYG3 113 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 A0A1B0GW15 77 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 TMEM262E9PQX1 116 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 SNAPINO95295 136 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 CKS2P33552 79 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 HBBP68871 147 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 PRR3P79522 188 aaKnown RBP4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 GAGE6Q13070 117 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 MIAQ16674 131 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 NDUFA5Q16718 116 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 KIAA1644Q3SXP7 199 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 SPACA4Q8TDM5 124 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 BTF3L4Q96K17 158 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 IMMP2LQ96T52 175 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 ST20Q9HBF5 79 aa4.06□□□□□ -1.76
CTNNA1-208ENST00000518381 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 TGIF2-C20orf24A0A0A6YYL0 155 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 SDHAF1A6NFY7 115 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 D6R8Y8 96 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 ANGP03950 147 aaKnown RBP4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 CHTF8P0CG12 524 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 PMCHP20382 165 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 POLR2KP53803 58 aaKnown RBP4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 PKIAP61925 76 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 RHEBQ15382 184 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 TMEM136Q6ZRR5 245 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 ATP5L2Q7Z4Y8 100 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 SVBPQ8N300 66 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 NRACQ8N912 160 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 MRAP2Q96G30 205 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 CHCHD5Q9BSY4 110 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 TMEM242Q9NWH2 141 aa4.05□□□□□ -1.76
CTNNA1-208ENST00000518381 LOC389332A0A1B0GUA5 103 aa4.04□□□□□ -1.76
CTNNA1-208ENST00000518381 TNFRSF6BO95407 300 aa4.04□□□□□ -1.76
CTNNA1-208ENST00000518381 NPYP01303 97 aa4.04□□□□□ -1.76
CTNNA1-208ENST00000518381 S100A8P05109 93 aa4.04□□□□□ -1.76
CTNNA1-208ENST00000518381 S100PP25815 95 aa4.04□□□□□ -1.76
CTNNA1-208ENST00000518381 COTL1Q14019 142 aa4.04□□□□□ -1.76
CTNNA1-208ENST00000518381 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.04□□□□□ -1.76
CTNNA1-208ENST00000518381 TRBV25-1A0A075B6N4 114 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 IGHV1-24A0A0C4DH33 117 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 TRBV6-5A0A0K0K1A5 114 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 hDV102S1A0JD36 115 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 IGKV2-29A2NJV5 120 aaPredicted RBP4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 I3L3M4 83 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 VCYO14598 125 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 SCO1O75880 301 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 TSHBP01222 138 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 APCSP02743 223 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 AMTP48728 403 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 SUMO2P61956 95 aaKnown RBP4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 MPV17L2Q567V2 206 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 CBLN2Q8IUK8 224 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 PRELID3AQ96N28 172 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 TMEM243Q9BU79 118 aa4.03□□□□□ -1.76
CTNNA1-208ENST00000518381 IGLV4-60A0A075B6I1 120 aa4.02□□□□□ -1.77
CTNNA1-208ENST00000518381 TRBV24-1A0A075B6N3 115 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms