RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 GAGE2EQ4V326 116 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 KRTAP13-2Q52LG2 175 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 TRIQKQ629K1 86 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 KRTAP7-1Q8IUC3 87 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 TSKUQ8WUA8 353 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 DEDD2Q8WXF8 326 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 AP1S3Q96PC3 154 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 WFDC1Q9HC57 220 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 GAGE2DQ9UEU5 116 aa3.21□□□□□ -1.9
LINC00535-202ENST00000517785 SNAI2O43623 268 aa3.2□□□□□ -1.9
LINC00535-202ENST00000517785 RASL11AQ6T310 242 aa3.2□□□□□ -1.9
LINC00535-202ENST00000517785 PGLYRP4Q96LB8 373 aa3.2□□□□□ -1.9
LINC00535-202ENST00000517785 TPPP3Q9BW30 176 aa3.2□□□□□ -1.9
LINC00535-202ENST00000517785 RBM38Q9H0Z9 239 aaKnown RBP3.2□□□□□ -1.9
LINC00535-202ENST00000517785 HSPB11Q9Y547 144 aa3.2□□□□□ -1.9
LINC00535-202ENST00000517785 C19orf71A6NCJ1 209 aa3.19□□□□□ -1.9
LINC00535-202ENST00000517785 M0R2T5 61 aa3.19□□□□□ -1.9
LINC00535-202ENST00000517785 SEC61BP60468 96 aaKnown RBP3.19□□□□□ -1.9
LINC00535-202ENST00000517785 UBE2G1P62253 170 aa3.19□□□□□ -1.9
LINC00535-202ENST00000517785 SPAG11BQ08648 103 aa3.19□□□□□ -1.9
LINC00535-202ENST00000517785 KRTAP13-3Q3SY46 172 aa3.19□□□□□ -1.9
LINC00535-202ENST00000517785 CD164L2Q6UWJ8 174 aa3.19□□□□□ -1.9
LINC00535-202ENST00000517785 TMEM167BQ9NRX6 74 aa3.19□□□□□ -1.9
LINC00535-202ENST00000517785 A0A1W2PRE2 83 aa3.18□□□□□ -1.9
LINC00535-202ENST00000517785 CENPXA8MT69 81 aa3.18□□□□□ -1.9
LINC00535-202ENST00000517785 APCSP02743 223 aa3.18□□□□□ -1.9
LINC00535-202ENST00000517785 OR5AL1P0C617 328 aa3.18□□□□□ -1.9
LINC00535-202ENST00000517785 NTF3P20783 257 aa3.18□□□□□ -1.9
LINC00535-202ENST00000517785 SUMO2P61956 95 aaKnown RBP3.18□□□□□ -1.9
LINC00535-202ENST00000517785 SS18Q15532 418 aa3.18□□□□□ -1.9
LINC00535-202ENST00000517785 COX8CQ7Z4L0 72 aa3.18□□□□□ -1.9
LINC00535-202ENST00000517785 C5orf38Q86SI9 138 aa3.18□□□□□ -1.9
LINC00535-202ENST00000517785 CTDSP1Q9GZU7 261 aa3.18□□□□□ -1.9
LINC00535-202ENST00000517785 NIT2Q9NQR4 276 aa3.18□□□□□ -1.9
LINC00535-202ENST00000517785 NUDT15Q9NV35 164 aa3.18□□□□□ -1.9
LINC00535-202ENST00000517785 ZFP30Q9Y2G7 519 aa3.18□□□□□ -1.9
LINC00535-202ENST00000517785 COX7A2LO14548 114 aa3.17□□□□□ -1.9
LINC00535-202ENST00000517785 CXorf1O96002 111 aa3.17□□□□□ -1.9
LINC00535-202ENST00000517785 LTAP01374 205 aa3.17□□□□□ -1.9
LINC00535-202ENST00000517785 MT3P25713 68 aa3.17□□□□□ -1.9
LINC00535-202ENST00000517785 S100A5P33763 92 aa3.17□□□□□ -1.9
LINC00535-202ENST00000517785 RNASE13Q5GAN3 156 aaKnown RBP3.17□□□□□ -1.9
LINC00535-202ENST00000517785 LINC00242Q5T6M2 205 aa3.17□□□□□ -1.9
LINC00535-202ENST00000517785 MPLKIPQ8TAP9 179 aa3.17□□□□□ -1.9
LINC00535-202ENST00000517785 HIST1H2BAQ96A08 127 aa3.17□□□□□ -1.9
LINC00535-202ENST00000517785 RPL39LQ96EH5 51 aaKnown RBP3.17□□□□□ -1.9
LINC00535-202ENST00000517785 FMC1Q96HJ9 113 aa3.17□□□□□ -1.9
LINC00535-202ENST00000517785 TMEM101Q96IK0 257 aa3.17□□□□□ -1.9
LINC00535-202ENST00000517785 BTF3L4Q96K17 158 aa3.17□□□□□ -1.9
LINC00535-202ENST00000517785 C2orf48Q96LS8 159 aa3.17□□□□□ -1.9
LINC00535-202ENST00000517785 MED28Q9H204 178 aa3.17□□□□□ -1.9
LINC00535-202ENST00000517785 FAM74A7A6NL05 159 aa3.16□□□□□ -1.9
LINC00535-202ENST00000517785 NOL3O60936 208 aaKnown RBP3.16□□□□□ -1.9
LINC00535-202ENST00000517785 CXCL1P09341 107 aa3.16□□□□□ -1.9
LINC00535-202ENST00000517785 ESDP10768 282 aa3.16□□□□□ -1.9
LINC00535-202ENST00000517785 AKR1C3P42330 323 aa3.16□□□□□ -1.9
LINC00535-202ENST00000517785 OR2D3Q8NGH3 330 aa3.16□□□□□ -1.9
LINC00535-202ENST00000517785 C6orf48Q9UBA6 75 aa3.16□□□□□ -1.9
LINC00535-202ENST00000517785 TRAV13-1A0A0B4J241 112 aa3.15□□□□□ -1.91
LINC00535-202ENST00000517785 CCDC160A6NGH7 325 aa3.15□□□□□ -1.91
LINC00535-202ENST00000517785 PLA2G10O15496 165 aa3.15□□□□□ -1.91
LINC00535-202ENST00000517785 LYRM1O43325 122 aa3.15□□□□□ -1.91
LINC00535-202ENST00000517785 IL7P13232 177 aa3.15□□□□□ -1.91
LINC00535-202ENST00000517785 ZNF25P17030 456 aaPredicted RBP3.15□□□□□ -1.91
LINC00535-202ENST00000517785 RPL28P46779 137 aaKnown RBP3.15□□□□□ -1.91
LINC00535-202ENST00000517785 C9orf129Q5T035 196 aaKnown RBP3.15□□□□□ -1.91
LINC00535-202ENST00000517785 UNQ6190/PRO20217Q6UXQ8 127 aa3.15□□□□□ -1.91
LINC00535-202ENST00000517785 ORAOV1Q8WV07 137 aa3.15□□□□□ -1.91
LINC00535-202ENST00000517785 PPP1R1CQ8WVI7 109 aa3.15□□□□□ -1.91
LINC00535-202ENST00000517785 IMMP2LQ96T52 175 aa3.15□□□□□ -1.91
LINC00535-202ENST00000517785 ACTR3CQ9C0K3 210 aaPredicted RBP3.15□□□□□ -1.91
LINC00535-202ENST00000517785 SMDT1Q9H4I9 107 aa3.15□□□□□ -1.91
LINC00535-202ENST00000517785 CDC42SE2Q9NRR3 84 aa3.15□□□□□ -1.91
LINC00535-202ENST00000517785 MRPL35Q9NZE8 188 aaKnown RBP3.15□□□□□ -1.91
LINC00535-202ENST00000517785 ALG5Q9Y673 324 aa3.15□□□□□ -1.91
LINC00535-202ENST00000517785 IGKV2D-26A0A0A0MRZ7 120 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 IGLV5-39A0A0G2JS06 123 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 INMT-MINDY4F8WBC2 141 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 G3V3Q6 166 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 H7C423 109 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 NDUFA1O15239 70 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 NUPR1O60356 82 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 ATP6V0CP27449 155 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 ZNF726P1Q15940 193 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 CNPY1Q3B7I2 92 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 CST9LP1Q5W188 147 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 C3orf22Q8N5N4 141 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 GATD1Q8NB37 220 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 STOML3Q8TAV4 291 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 TMEM242Q9NWH2 141 aa3.14□□□□□ -1.91
LINC00535-202ENST00000517785 SDHAF1A6NFY7 115 aa3.13□□□□□ -1.91
LINC00535-202ENST00000517785 BCE1O60756 84 aa3.13□□□□□ -1.91
LINC00535-202ENST00000517785 MPC2O95563 127 aa3.13□□□□□ -1.91
LINC00535-202ENST00000517785 NCR2O95944 276 aa3.13□□□□□ -1.91
LINC00535-202ENST00000517785 TLX1NBP0CAT3 122 aa3.13□□□□□ -1.91
LINC00535-202ENST00000517785 TRGC1P0CF51 173 aa3.13□□□□□ -1.91
LINC00535-202ENST00000517785 IGLC6P0CF74 106 aa3.13□□□□□ -1.91
LINC00535-202ENST00000517785 PMCHP20382 165 aa3.13□□□□□ -1.91
LINC00535-202ENST00000517785 FP248Q71RG6 208 aaPredicted RBP3.13□□□□□ -1.91
LINC00535-202ENST00000517785 LINC00469Q8N7U9 141 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms